Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15o05
(627 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein. 34 0.36
AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein. 34 0.36
BC000450-1|AAH00450.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.83
AL137801-6|CAI21988.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.83
AL137801-5|CAI21987.1| 587|Homo sapiens glyceronephosphate O-ac... 33 0.83
AL117352-3|CAI23094.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.83
AL117352-2|CAI23093.1| 587|Homo sapiens glyceronephosphate O-ac... 33 0.83
AK223304-1|BAD97024.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.83
AK222773-1|BAD96493.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.83
AJ002190-1|CAA05242.1| 680|Homo sapiens dihydroxyacetone phosph... 33 0.83
AF218233-1|AAG17547.1| 680|Homo sapiens dihydroxyacetonephospha... 33 0.83
AF043937-1|AAC24505.1| 680|Homo sapiens peroxisomal acyl-CoA:di... 33 0.83
AB209882-1|BAD93119.1| 693|Homo sapiens glyceronephosphate O-ac... 33 0.83
L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated prote... 32 1.9
U27109-1|AAC52065.1| 1228|Homo sapiens prepromultimerin protein. 31 2.5
BC063848-1|AAH63848.1| 1228|Homo sapiens multimerin 1 protein. 31 2.5
AC093759-2|AAY40957.1| 1228|Homo sapiens unknown protein. 31 2.5
AL512506-1|CAI16114.1| 273|Homo sapiens novel protein protein. 31 3.3
U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein. 31 4.4
BC033900-1|AAH33900.1| 335|Homo sapiens NDE1 protein protein. 31 4.4
BC001421-1|AAH01421.1| 335|Homo sapiens nudE nuclear distributi... 31 4.4
AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein FL... 31 4.4
AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin cross... 31 4.4
AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin cros... 31 4.4
AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin cross... 31 4.4
AK056672-1|BAB71248.1| 600|Homo sapiens protein ( Homo sapiens ... 31 4.4
AK000108-1|BAA90949.1| 335|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4 p... 31 4.4
AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4 p... 31 4.4
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 30 5.8
U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protei... 30 5.8
AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F, 3... 30 5.8
AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F, 3... 30 5.8
X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitam... 30 7.7
J03258-1|AAA61273.1| 427|Homo sapiens VDR protein. 30 7.7
BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein. 30 7.7
AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D (1,25-dihydro... 30 7.7
AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor prot... 30 7.7
AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor prot... 30 7.7
>AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 428 AFERTRRQT*HAAVGRKIENRHRNGKQKWHGDVSA-RHYQTPAFGHIFGTHRRPHQTRFC 252
+F+++ RQ+ ++ G+K+ ++ +G+ KW G + A + P +G R Q
Sbjct: 193 SFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSET 252
Query: 251 FGPRATFSQ 225
G + F+Q
Sbjct: 253 LGQASHFNQ 261
>AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.36
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -2
Query: 428 AFERTRRQT*HAAVGRKIENRHRNGKQKWHGDVSA-RHYQTPAFGHIFGTHRRPHQTRFC 252
+F+++ RQ+ ++ G+K+ ++ +G+ KW G + A + P +G R Q
Sbjct: 193 SFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSET 252
Query: 251 FGPRATFSQ 225
G + F+Q
Sbjct: 253 LGQASHFNQ 261
>BC000450-1|AAH00450.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AL137801-6|CAI21988.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AL137801-5|CAI21987.1| 587|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 587
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AL117352-3|CAI23094.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AL117352-2|CAI23093.1| 587|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 587
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AK223304-1|BAD97024.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase variant protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AK222773-1|BAD96493.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase variant protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AJ002190-1|CAA05242.1| 680|Homo sapiens dihydroxyacetone phosphate
acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AF218233-1|AAG17547.1| 680|Homo sapiens dihydroxyacetonephosphate
acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AF043937-1|AAC24505.1| 680|Homo sapiens peroxisomal
acyl-CoA:dihydroxyacetonephosphate acyltransferase
protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AB209882-1|BAD93119.1| 693|Homo sapiens glyceronephosphate
O-acyltransferase variant protein.
Length = 693
Score = 33.1 bits (72), Expect = 0.83
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = -3
Query: 295 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 116
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 37 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 96
Query: 115 KIRKIAKRVI-DVDCTHNVVKEVIQEV 38
I++++K + VD V E++ E+
Sbjct: 97 VIKQLSKESLQSVDVLREEVSEILDEM 123
>L40157-1|AAA79121.1| 1410|Homo sapiens endosome-associated protein
protein.
Length = 1410
Score = 31.9 bits (69), Expect = 1.9
Identities = 24/101 (23%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Frame = -3
Query: 562 RDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELD----AKLNM 395
+++L D+++ H++ ++ +++ ET N++ ++ + + ++++LD AK +
Sbjct: 595 QENLHDQVQEQKAHLRA----AQDRVLSLETSVNELNSQLNESKEKVSQLDIQIKAKTEL 650
Query: 394 LQSAEKLKTAIVTESKNGTVTFPRDI-TKHQHLAIFSERID 275
L SAE KTA + +N T + KHQ L + ++D
Sbjct: 651 LLSAEAAKTAQRADLQNHLDTAQNALQDKHQELNKITTQLD 691
>U27109-1|AAC52065.1| 1228|Homo sapiens prepromultimerin protein.
Length = 1228
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -3
Query: 553 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKL 374
+R KIE++ V LN ++ H +N+V R + E R+NE L M K
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEY--ALEMEDGLNKT 731
Query: 373 KTAI 362
T I
Sbjct: 732 MTII 735
>BC063848-1|AAH63848.1| 1228|Homo sapiens multimerin 1 protein.
Length = 1228
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -3
Query: 553 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKL 374
+R KIE++ V LN ++ H +N+V R + E R+NE L M K
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEY--ALEMEDGLNKT 731
Query: 373 KTAI 362
T I
Sbjct: 732 MTII 735
>AC093759-2|AAY40957.1| 1228|Homo sapiens unknown protein.
Length = 1228
Score = 31.5 bits (68), Expect = 2.5
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -3
Query: 553 LRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLNMLQSAEKL 374
+R KIE++ V LN ++ H +N+V R + E R+NE L M K
Sbjct: 674 IRKKIENLTSAVNSLNFIIKELTKRHNLLRNEVQGRDDALERRINEY--ALEMEDGLNKT 731
Query: 373 KTAI 362
T I
Sbjct: 732 MTII 735
>AL512506-1|CAI16114.1| 273|Homo sapiens novel protein protein.
Length = 273
Score = 31.1 bits (67), Expect = 3.3
Identities = 16/64 (25%), Positives = 35/64 (54%)
Frame = -3
Query: 577 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDVGNRFEQFELRLNELDAKLN 398
Q + + +L+DKI +V + + + E+ THE + ++ + ++++ L L ++N
Sbjct: 183 QVQEDITNLKDKIITVKESIIEKTCFLEEEKKTHEKLRKEIEVQHKRYDAILKRLHCQVN 242
Query: 397 MLQS 386
LQS
Sbjct: 243 KLQS 246
>U25725-1|AAA86889.1| 1017|Homo sapiens AH antigen protein.
Length = 1017
Score = 30.7 bits (66), Expect = 4.4
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = -3
Query: 577 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDV---GNRFEQFELRLNELDA 407
+ +GE D L+DK+E++ + ++ N E ++ E K +V + E+ L +
Sbjct: 47 ERDGENDSLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFEL 106
Query: 406 KLNMLQSAEKLKTAIVTESK 347
L L+S ++ T + E +
Sbjct: 107 DLVTLRSEKENLTKQIQEKQ 126
>BC033900-1|AAH33900.1| 335|Homo sapiens NDE1 protein protein.
Length = 335
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -3
Query: 553 LRDKIESVLKHVKKLNTNSEKF----MVTHETFKNDVGNRFEQFELRLNELDAKLNMLQS 386
++D+++ ++ +++ N + E+ +++ E F+ + E+ +ELD K N+L+S
Sbjct: 106 IKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLES 165
Query: 385 AEKLK 371
++LK
Sbjct: 166 VQRLK 170
>BC001421-1|AAH01421.1| 335|Homo sapiens nudE nuclear distribution
gene E homolog 1 (A. nidulans) protein.
Length = 335
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -3
Query: 553 LRDKIESVLKHVKKLNTNSEKF----MVTHETFKNDVGNRFEQFELRLNELDAKLNMLQS 386
++D+++ ++ +++ N + E+ +++ E F+ + E+ +ELD K N+L+S
Sbjct: 106 IKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLES 165
Query: 385 AEKLK 371
++LK
Sbjct: 166 VQRLK 170
>AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein
FLJ32110 protein.
Length = 1349
Score = 30.7 bits (66), Expect = 4.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3
Query: 178 VHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKE 53
VH NP I+ EK DK ++ K +R++ CTHNV +
Sbjct: 399 VHLNPNSRIEN-REKSLDKTERVSKNVQRLVKEACTHNVASK 439
>AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -3
Query: 241 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 62
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -3
Query: 241 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 62
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -3
Query: 241 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 62
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AK056672-1|BAB71248.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32110 fis, clone OCBBF2001527. ).
Length = 600
Score = 30.7 bits (66), Expect = 4.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -3
Query: 178 VHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKE 53
VH NP I+ EK DK ++ K +R++ CTHNV +
Sbjct: 399 VHLNPNSRIEN-REKSLDKTERVSKNVQRLVKEACTHNVASK 439
>AK000108-1|BAA90949.1| 335|Homo sapiens protein ( Homo sapiens
cDNA FLJ20101 fis, clone COL04655. ).
Length = 335
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/65 (23%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Frame = -3
Query: 553 LRDKIESVLKHVKKLNTNSEKF----MVTHETFKNDVGNRFEQFELRLNELDAKLNMLQS 386
++D+++ ++ +++ N + E+ +++ E F+ + E+ +ELD K N+L+S
Sbjct: 106 IKDQLQKYIRELEQANDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLES 165
Query: 385 AEKLK 371
++LK
Sbjct: 166 VQRLK 170
>AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5314
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -3
Query: 241 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 62
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5938
Score = 30.7 bits (66), Expect = 4.4
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = -3
Query: 241 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 62
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 30.3 bits (65), Expect = 5.8
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = -3
Query: 577 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDV---GNRFEQFELRLNELDA 407
+ E E D L+DK+E++ + ++ N E ++ E K +V + E+ L +
Sbjct: 2143 ERERENDSLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFEL 2202
Query: 406 KLNMLQSAEKLKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 263
L L+S ++ T + E + + ++ + L E+ + +IK
Sbjct: 2203 DLVTLRSEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIK 2250
>U19769-1|AAA82889.1| 3210|Homo sapiens CENP-F kinetochore protein
protein.
Length = 3210
Score = 30.3 bits (65), Expect = 5.8
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = -3
Query: 577 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDV---GNRFEQFELRLNELDA 407
+ E E D L+DK+E++ + ++ N E ++ E K +V + E+ L +
Sbjct: 2240 ERERENDSLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFEL 2299
Query: 406 KLNMLQSAEKLKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 263
L L+S ++ T + E + + ++ + L E+ + +IK
Sbjct: 2300 DLVTLRSEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIK 2347
>AL445666-1|CAH71810.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 30.3 bits (65), Expect = 5.8
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = -3
Query: 577 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDV---GNRFEQFELRLNELDA 407
+ E E D L+DK+E++ + ++ N E ++ E K +V + E+ L +
Sbjct: 2144 ERERENDSLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFEL 2203
Query: 406 KLNMLQSAEKLKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 263
L L+S ++ T + E + + ++ + L E+ + +IK
Sbjct: 2204 DLVTLRSEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIK 2251
>AL445305-6|CAH73032.1| 3114|Homo sapiens centromere protein F,
350/400ka (mitosin) protein.
Length = 3114
Score = 30.3 bits (65), Expect = 5.8
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Frame = -3
Query: 577 QTEGERDDLRDKIESVLKHVKKLNTNSEKFMVTHETFKNDV---GNRFEQFELRLNELDA 407
+ E E D L+DK+E++ + ++ N E ++ E K +V + E+ L +
Sbjct: 2144 ERERENDSLKDKVENLERELQMSEENQELVILDAENSKAEVETLKTQIEEMARSLKVFEL 2203
Query: 406 KLNMLQSAEKLKTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIK 263
L L+S ++ T + E + + ++ + L E+ + +IK
Sbjct: 2204 DLVTLRSEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEKEQAEIQIK 2251
>X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitamin
D-3 receptor protein.
Length = 427
Score = 29.9 bits (64), Expect = 7.7
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 373 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 197
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 196 EVLYDGVHPNPLLAIQCINEKLYDKHYK 113
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
>J03258-1|AAA61273.1| 427|Homo sapiens VDR protein.
Length = 427
Score = 29.9 bits (64), Expect = 7.7
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 373 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 197
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 196 EVLYDGVHPNPLLAIQCINEKLYDKHYK 113
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
>BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein.
Length = 427
Score = 29.9 bits (64), Expect = 7.7
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 373 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 197
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 196 EVLYDGVHPNPLLAIQCINEKLYDKHYK 113
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
>AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D
(1,25-dihydroxyvitamin D3) receptor protein.
Length = 424
Score = 29.9 bits (64), Expect = 7.7
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 373 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 197
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 51 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 110
Query: 196 EVLYDGVHPNPLLAIQCINEKLYDKHYK 113
E L D + P Q I L D H+K
Sbjct: 111 EALKDSLRPKLSEEQQRIIAILLDAHHK 138
>AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 29.9 bits (64), Expect = 7.7
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 373 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 197
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 196 EVLYDGVHPNPLLAIQCINEKLYDKHYK 113
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
>AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 29.9 bits (64), Expect = 7.7
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = -3
Query: 373 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 197
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 196 EVLYDGVHPNPLLAIQCINEKLYDKHYK 113
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,736,772
Number of Sequences: 237096
Number of extensions: 1623401
Number of successful extensions: 8513
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 8356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8510
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -