Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15n15
(725 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 92 3e-19
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 73 2e-13
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 73 2e-13
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 72 5e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 72 5e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 72 5e-13
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 69 3e-12
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 69 3e-12
U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical pr... 48 9e-06
Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein. 43 2e-04
U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein. 43 2e-04
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 43 2e-04
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 43 2e-04
U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and en... 40 0.001
L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RET... 40 0.001
L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RET... 40 0.001
Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 38 0.010
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 38 0.010
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 37 0.013
AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical ... 37 0.013
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 37 0.013
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 37 0.013
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 37 0.017
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 36 0.039
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 34 0.090
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 34 0.090
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical pr... 33 0.16
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 33 0.27
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 32 0.48
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.48
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 31 0.63
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 31 1.1
Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 30 1.9
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 1.9
AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical ... 30 1.9
Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical... 29 2.6
AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical... 29 2.6
Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 29 3.4
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.4
U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 3.4
AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical ... 29 3.4
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 29 4.5
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 29 4.5
AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical... 29 4.5
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 29 4.5
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 29 4.5
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 29 4.5
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 5.9
AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein. 28 5.9
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 5.9
Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/114 (37%), Positives = 58/114 (50%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIA 546
C TGHF+R+C +GG G C+ C GH++RDC G G
Sbjct: 40 CQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARSE-GGSGGYGGRG 98
Query: 545 RECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGT 384
E +S CYNC ++GHI+R C E G + + CY C ++GHISR+CP T
Sbjct: 99 GE-GRSFGGQKCYNCGRSGHISRECTESG-SAEEKRCYQCQETGHISRDCPSQT 150
Score = 91.5 bits (217), Expect = 6e-19
Identities = 53/151 (35%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD------------ 582
C + GH +R C G G C+ C TGHF+RDC +
Sbjct: 9 CQQPGHISRNCPNGESDGGRRG-GGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGGGG 67
Query: 581 RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISR 402
CY C G GH +R+C PS + +G E GR Q CYNC +SGHISR
Sbjct: 68 SCYNCGGRGHYSRDC------PSARSEGGSGGYGGRGGE-GRSFGGQKCYNCGRSGHISR 120
Query: 401 NCPDG----TKTCYVCGKPGHISRECDEARN 321
C + K CY C + GHISR+C N
Sbjct: 121 ECTESGSAEEKRCYQCQETGHISRDCPSQTN 151
Score = 81.4 bits (192), Expect = 6e-16
Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 37/132 (28%)
Frame = -1
Query: 587 ADR-CYRCNGTGHIARECAQSPDE---------PSCYNCNKTGHIARNCPEGGRESATQ- 441
+DR CY+C GHI+R C + +CYNC +TGH +R+CP+GG +
Sbjct: 2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRG 61
Query: 440 ------TCYNCNKSGHISRNCPD--------------------GTKTCYVCGKPGHISRE 339
+CYNC GH SR+CP G + CY CG+ GHISRE
Sbjct: 62 GGGGGGSCYNCGGRGHYSRDCPSARSEGGSGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121
Query: 338 CDEARN*PQPPC 303
C E+ + + C
Sbjct: 122 CTESGSAEEKRC 133
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = -1
Query: 662 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 504
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 503 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 354
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 353 HISREC 336
H S EC
Sbjct: 272 HRSNEC 277
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -1
Query: 464 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 48.0 bits (109), Expect = 7e-06
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 17/132 (12%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGTGHI 549
C + GH + +C + R+ C+ C + GH +R+C EE R R G G
Sbjct: 163 CQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGG 215
Query: 548 ARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNCNKS 417
A ++ C+NC GH + CPE R C+NC +
Sbjct: 216 AGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQ 270
Query: 416 GHISRNCPDGTK 381
GH S CP+ K
Sbjct: 271 GHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 686 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 516
GG G R KCF C GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 377 CYVCGKPGHISRECDEARN*PQP 309
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = -1
Query: 662 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 504
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 503 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 354
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 353 HISREC 336
H S EC
Sbjct: 272 HRSNEC 277
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -1
Query: 464 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 48.0 bits (109), Expect = 7e-06
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 17/132 (12%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGTGHI 549
C + GH + +C + R+ C+ C + GH +R+C EE R R G G
Sbjct: 163 CQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGG 215
Query: 548 ARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNCNKS 417
A ++ C+NC GH + CPE R C+NC +
Sbjct: 216 AGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQ 270
Query: 416 GHISRNCPDGTK 381
GH S CP+ K
Sbjct: 271 GHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 686 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 516
GG G R KCF C GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 377 CYVCGKPGHISRECDEARN*PQP 309
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 72.9 bits (171), Expect = 2e-13
Identities = 41/126 (32%), Positives = 51/126 (40%), Gaps = 17/126 (13%)
Frame = -1
Query: 662 GFNRQREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDEPSCYN 504
G + CF C + GH + DC KE R CY C GH +REC + P E
Sbjct: 152 GGGERNNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211
Query: 503 CNKTGHIARNCPE----------GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPG 354
N GG E C+NC GH S CP+ + C+ CG+ G
Sbjct: 212 FGGGAGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQG 271
Query: 353 HISREC 336
H S EC
Sbjct: 272 HRSNEC 277
Score = 51.6 bits (118), Expect = 6e-07
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = -1
Query: 464 GGRESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
GG E C+NC + GH S +CP+ K CY C +PGH SREC E R
Sbjct: 152 GGGER-NNNCFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEER 202
Score = 48.0 bits (109), Expect = 7e-06
Identities = 36/132 (27%), Positives = 52/132 (39%), Gaps = 17/132 (12%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEAD-RCYRCNGTGHI 549
C + GH + +C + R+ C+ C + GH +R+C EE R R G G
Sbjct: 163 CQQPGHRSSDCPEPRK-------EREPRVCYNCQQPGHTSRECTEERKPREGRTGGFGGG 215
Query: 548 ARECAQSPDEP----------------SCYNCNKTGHIARNCPEGGRESATQTCYNCNKS 417
A ++ C+NC GH + CPE R C+NC +
Sbjct: 216 AGFGNNGGNDGFGGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQ 270
Query: 416 GHISRNCPDGTK 381
GH S CP+ K
Sbjct: 271 GHRSNECPNPAK 282
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = -1
Query: 686 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP 516
GG G R KCF C GH + +C E C+ C GH + EC +P +P
Sbjct: 228 GGDGGFGGGEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC-PNPAKP 283
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 377 CYVCGKPGHISRECDEARN*PQP 309
C+ C +PGH S +C E R +P
Sbjct: 160 CFNCQQPGHRSSDCPEPRKEREP 182
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = -1
Query: 650 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 507
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 506 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 336
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -1
Query: 515 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 381
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 27/161 (16%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG----- 561
C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 262 CQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGS 314
Query: 560 ----------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQTCY 432
TG + + S + G + GG R C+
Sbjct: 315 SGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCF 374
Query: 431 NCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 375 NCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = -1
Query: 620 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 465
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 464 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 330
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 51.2 bits (117), Expect = 7e-07
Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT---- 558
C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 376 CQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 557 ---------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGH 411
G A + + C+NC GH + CPE R C+NC + GH
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGH 483
Query: 410 ISRNCPDGTK 381
S CP+ K
Sbjct: 484 RSNECPNPAK 493
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -1
Query: 458 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -1
Query: 620 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 450
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 449 ATQTCYNCNKSG 414
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -1
Query: 650 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 531
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 419 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 309
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = -1
Query: 650 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 507
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 506 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 336
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -1
Query: 515 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 381
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 27/161 (16%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG----- 561
C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 262 CQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGS 314
Query: 560 ----------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQTCY 432
TG + + S + G + GG R C+
Sbjct: 315 SGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCF 374
Query: 431 NCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 375 NCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = -1
Query: 620 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 465
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 464 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 330
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 51.2 bits (117), Expect = 7e-07
Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT---- 558
C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 376 CQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 557 ---------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGH 411
G A + + C+NC GH + CPE R C+NC + GH
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGH 483
Query: 410 ISRNCPDGTK 381
S CP+ K
Sbjct: 484 RSNECPNPAK 493
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -1
Query: 458 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -1
Query: 620 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 450
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 449 ATQTCYNCNKSG 414
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -1
Query: 650 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 531
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 419 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 309
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 71.7 bits (168), Expect = 5e-13
Identities = 40/120 (33%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Frame = -1
Query: 650 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQS--PDE-----PSCY 507
+ CF C + GH + DC KE R CY C GH +R+C + P E S +
Sbjct: 369 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 506 NCNKTGHIARNCPEG---GRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISREC 336
G EG E C+NC GH S CP+ + C+ CG+ GH S EC
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNEC 488
Score = 58.4 bits (135), Expect = 5e-09
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = -1
Query: 515 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 381
+C+NC + GH + +CPE +E + CYNC + GH SR+CP+ K
Sbjct: 258 NCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERK 302
Score = 53.2 bits (122), Expect = 2e-07
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 27/161 (16%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNG----- 561
C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 262 CQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGS 314
Query: 560 ----------TGH---IARECAQSPDEPSCYNCNKTGHIARNCPEGG----RESATQTCY 432
TG + + S + G + GG R C+
Sbjct: 315 SGFGGGNGGGTGFDSGLTNGFGSGNNGESGFGSGGFGGNSNGFGSGGGGQDRGERNNNCF 374
Query: 431 NCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 375 NCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415
Score = 53.2 bits (122), Expect = 2e-07
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Frame = -1
Query: 620 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPE----- 465
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE
Sbjct: 359 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 418
Query: 464 GGRESATQTCYNCNKSGH-------ISRNCPDGTKTCYVCGKPGHISRECDE 330
GR T N G N G C+ C GH S EC E
Sbjct: 419 EGRNGFTSGFGGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPE 470
Score = 51.2 bits (117), Expect = 7e-07
Identities = 36/130 (27%), Positives = 51/130 (39%), Gaps = 15/130 (11%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGT---- 558
C + GH + +C + R+ C+ C + GH +RDC EE NG
Sbjct: 376 CQQPGHRSNDCPEPKK-------EREPRVCYNCQQPGHNSRDCPEERKPREGRNGFTSGF 428
Query: 557 ---------GHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGH 411
G A + + C+NC GH + CPE R C+NC + GH
Sbjct: 429 GGGNDGGFGGGNAEGFGNNEERGPMKCFNCKGEGHRSAECPEPPRG-----CFNCGEQGH 483
Query: 410 ISRNCPDGTK 381
S CP+ K
Sbjct: 484 RSNECPNPAK 493
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Frame = -1
Query: 458 RESATQTCYNCNKSGHISRNCPDGTK-----TCYVCGKPGHISRECDEAR 324
R C+NC + GH S +CP+ K CY C +PGH SR+C E R
Sbjct: 252 RGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 301
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = -1
Query: 620 TGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS---CYNCNKTGHIARNCPEGGRES 450
+G +D E + C+ C GH + +C + E CYNC + GH +R+CPE +
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEERKPR 304
Query: 449 ATQTCYNCNKSG 414
+ + SG
Sbjct: 305 EGRNGFTGGSSG 316
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -1
Query: 650 QREKCFKCNRTGHFARDC----KEEADR-CYRCNGTGHIARECAQ 531
+ CF C + GH + DC KE R CY C GH +R+C +
Sbjct: 255 RNNNCFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 419 SGHISRNCPDGTKTCYVCGKPGHISRECDEARN*PQP 309
SG ++ + C+ C +PGH S +C E + +P
Sbjct: 245 SGGGGQDRGERNNNCFNCQQPGHRSNDCPEPKKEREP 281
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCNGTG 555
C GH ++EC + V R C C + GHFA DC + C C G
Sbjct: 575 CGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEG 625
Query: 554 HIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCPDGT 384
H A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 626 HFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRP 684
Query: 383 K 381
K
Sbjct: 685 K 685
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = -1
Query: 638 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARN 474
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQ-PRVPRGPCRNCGIEGHFAVD 630
Query: 473 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 336
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQ--PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = -1
Query: 626 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 453
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 452 SATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 303
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CYRCN 564
C GHFA +C Q V R C C + GHFA+DC+ E R C RC
Sbjct: 621 CGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCA 671
Query: 563 GTGHIARECAQSPDE 519
GH EC P +
Sbjct: 672 EEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 377 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 285
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 68.9 bits (161), Expect = 3e-12
Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKE---EADRCYRCNGTG 555
C GH ++EC + V R C C + GHFA DC + C C G
Sbjct: 575 CGEEGHISKECDKPKV---------PRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIEG 625
Query: 554 HIARECAQSPDEP--SCYNCNKTGHIARNCP-EGGRESATQTCYNCNKSGHISRNCPDGT 384
H A +C Q P P C NC + GH A++C E R T+ C C + GH CP
Sbjct: 626 HFAVDCDQ-PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPTRP 684
Query: 383 K 381
K
Sbjct: 685 K 685
Score = 64.5 bits (150), Expect = 7e-11
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 11/112 (9%)
Frame = -1
Query: 638 CFKCNRTGHFARDC-KEEADR--CYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARN 474
C C GH +++C K + R C C GH A +C Q P P C NC GH A +
Sbjct: 572 CHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQ-PRVPRGPCRNCGIEGHFAVD 630
Query: 473 CPEGGRESATQTCYNCNKSGHISRNCP------DGTKTCYVCGKPGHISREC 336
C + + C NC + GH +++C + T+ C C + GH EC
Sbjct: 631 CDQ--PKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYEC 680
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Frame = -1
Query: 626 NRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEP--SCYNCNKTGHIARNCPEGGRE 453
N+ G++ D E C+ C GHI++EC P P C NC + GH A +C +
Sbjct: 558 NQRGNW--DGGERPRGCHNCGEEGHISKEC-DKPKVPRFPCRNCEQLGHFASDCDQ--PR 612
Query: 452 SATQTCYNCNKSGHISRNCPDGTKT----CYVCGKPGHISREC--DEARN*PQPPC 303
C NC GH + +C D K C CG+ GH +++C + R P PC
Sbjct: 613 VPRGPCRNCGIEGHFAVDC-DQPKVPRGPCRNCGQEGHFAKDCQNERVRMEPTEPC 667
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/75 (36%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADR------CYRCN 564
C GHFA +C Q V R C C + GHFA+DC+ E R C RC
Sbjct: 621 CGIEGHFAVDCDQPKV---------PRGPCRNCGQEGHFAKDCQNERVRMEPTEPCRRCA 671
Query: 563 GTGHIARECAQSPDE 519
GH EC P +
Sbjct: 672 EEGHWGYECPTRPKD 686
Score = 35.5 bits (78), Expect = 0.039
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -1
Query: 377 CYVCGKPGHISRECDEARN*PQPPCLPYNQL 285
C+ CG+ GHIS+ECD+ + P+ PC QL
Sbjct: 572 CHNCGEEGHISKECDKPKV-PRFPCRNCEQL 601
>U80837-3|AAB37904.2| 384|Caenorhabditis elegans Hypothetical
protein F07E5.5 protein.
Length = 384
Score = 60.5 bits (140), Expect = 1e-09
Identities = 40/131 (30%), Positives = 56/131 (42%), Gaps = 12/131 (9%)
Frame = -1
Query: 686 GGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQ---SPDEP 516
G V D+ +R K + R G +D K C+ C GH +C + S +
Sbjct: 197 GKVTVADAMLLVKRWKTRETRRIGR--QDQKITGSACFHCREPGHRLADCPKRNSSSSDG 254
Query: 515 SCYNCNKTGHIARNCPEGGRESATQ-TCYNCNKSGHISRNC--------PDGTKTCYVCG 363
C+ C H C + G + TC+ C + GHISR+C PDG C VCG
Sbjct: 255 VCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVGHISRDCHQNVNGVYPDG-GCCNVCG 313
Query: 362 KPGHISRECDE 330
H+ R+C E
Sbjct: 314 ANTHLRRDCPE 324
Score = 54.8 bits (126), Expect = 6e-08
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Frame = -1
Query: 515 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC-PDGTK-----TCYVCGKPG 354
+C++C + GH +CP+ S+ C+ C H C G K TC+VC + G
Sbjct: 230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289
Query: 353 HISRECDEARN 321
HISR+C + N
Sbjct: 290 HISRDCHQNVN 300
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/93 (29%), Positives = 35/93 (37%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIA 546
C H EC + GV GF CF C + GH +RDC + + Y
Sbjct: 259 CGSMEHSIHECKKKGV----KGF--PYATCFVCKQVGHISRDCHQNVNGVY--------- 303
Query: 545 RECAQSPDEPSCYNCNKTGHIARNCPEGGRESA 447
PD C C H+ R+CPE + A
Sbjct: 304 ------PDGGCCNVCGANTHLRRDCPELAAQKA 330
>U41534-3|AAB47595.1| 1119|Caenorhabditis elegans Hypothetical
protein C16A3.7 protein.
Length = 1119
Score = 47.6 bits (108), Expect = 9e-06
Identities = 38/143 (26%), Positives = 51/143 (35%), Gaps = 2/143 (1%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIA 546
C R H + +C + V+ F + K CN H C E D + C G H
Sbjct: 388 CERICH-SGDCGECTVILEQDCFCGKTPKEVSCNPCAHEKYSCGSECDGMFSC-GIHHCT 445
Query: 545 RECAQSPDEPSCYNCNKTGHIARNCPEGGR--ESATQTCYNCNKSGHISRNCPDGTKTCY 372
++C + C C + R CP G +S T C + D TC
Sbjct: 446 KKC----HDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG 501
Query: 371 VCGKPGHISRECDEARN*PQPPC 303
GK H +C E P PPC
Sbjct: 502 TPGKNHHCREKCHEG---PCPPC 521
Score = 31.5 bits (68), Expect = 0.63
Identities = 25/87 (28%), Positives = 31/87 (35%), Gaps = 6/87 (6%)
Frame = +2
Query: 386 CRRDSCGRCGRTC-----CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRA 547
C CG C C R+ Q+ R P+C S C+ G T
Sbjct: 448 CHDKECGECETGANRIRTCPCGRNTLQSLGVTRKKCTDMVPTCDSVCDKWLTCG---TPG 504
Query: 548 LCAPCRYICSNGQPLPCNPSQSVLCGC 628
CR C G PCN + SV+C C
Sbjct: 505 KNHHCREKCHEGPCPPCNLNTSVICRC 531
>Z81494-3|CAB61009.1| 196|Caenorhabditis elegans Hypothetical
protein F02E9.2b protein.
Length = 196
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 470 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 309
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 102 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 159
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 581 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 453
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 156
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -1
Query: 641 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 531
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 112 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 152
>Z81494-2|CAB61008.1| 227|Caenorhabditis elegans Hypothetical
protein F02E9.2a protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 470 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 309
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 581 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 453
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -1
Query: 641 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 531
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75915-1|AAB49759.1| 227|Caenorhabditis elegans Lin-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 470 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 309
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 581 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 453
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -1
Query: 641 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 531
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>U75912-1|AAC47476.1| 227|Caenorhabditis elegans LIN-28 protein.
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -1
Query: 470 PEGGRESATQTCYNCNK-SGHISRNCPD---GTKTCYVCGKPGHISRECDEARN*PQP 309
P G +++ + C+ C K + H +++CP+ K CY CG H+S C E R +P
Sbjct: 133 PLGRKKAVSLRCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRKHRP 190
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = -1
Query: 581 RCYRCNGTG-HIARECAQ-SPDEPSCYNCNKTGHIARNCPEGGRE 453
RC+RC H A+ C D CY C H++ CPE R+
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPERRRK 187
Score = 31.1 bits (67), Expect = 0.84
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = -1
Query: 641 KCFKCNRTG-HFARDC---KEEADRCYRCNGTGHIARECAQ 531
+CF+C + H A+ C K +A CY C H++ C +
Sbjct: 143 RCFRCGKFATHKAKSCPNVKTDAKVCYTCGSEEHVSSICPE 183
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 446 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 306
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 638 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 534
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 515 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 381
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = -1
Query: 587 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 432
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 446 TQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDE-ARN*PQPP 306
+ TC+NC K GH + C + C CG P H + EC ++N Q P
Sbjct: 201 SNTCFNCKKYGHRATECSAPQRECANCGDPNHRANECASWSKNGVQEP 248
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -1
Query: 638 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECA 534
CF C + GH A +C C C H A ECA
Sbjct: 204 CFNCKKYGHRATECSAPQRECANCGDPNHRANECA 238
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -1
Query: 515 SCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDGTK 381
+C+NC K GH A C RE C NC H + C +K
Sbjct: 203 TCFNCKKYGHRATECSAPQRE-----CANCGDPNHRANECASWSK 242
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Frame = -1
Query: 587 ADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNC---PEGGRESATQTCY 432
++ C+ C GH A EC S + C NC H A C + G + T+ Y
Sbjct: 201 SNTCFNCKKYGHRATEC--SAPQRECANCGDPNHRANECASWSKNGVQEPTKVTY 253
>U15406-1|AAA50456.1| 2272|Caenorhabditis elegans gag, pol and env
protein precursor protein.
Length = 2272
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -1
Query: 533 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 357
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 625 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 683
Query: 356 GHISREC 336
GHI+ C
Sbjct: 684 GHIAWNC 690
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = -1
Query: 644 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 480
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 629 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 687
Query: 479 RNCPE 465
NCP+
Sbjct: 688 WNCPK 692
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 587 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 417
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 628 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 683
Query: 416 GHISRNCP 393
GHI+ NCP
Sbjct: 684 GHIAWNCP 691
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 644 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 513
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 654 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 698
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 698 ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 588
EC Q G S F + CF+CN GH A +C ++
Sbjct: 658 ECQQSGW-HMASCFKLKNRACFRCNEMGHIAWNCPKK 693
>L23646-13|AAA28035.2| 2175|Caenorhabditis elegans C. elegans RETR-1
protein, isoforma protein.
Length = 2175
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -1
Query: 533 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 357
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 528 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 586
Query: 356 GHISREC 336
GHI+ C
Sbjct: 587 GHIAWNC 593
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = -1
Query: 644 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 480
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 532 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 590
Query: 479 RNCPE 465
NCP+
Sbjct: 591 WNCPK 595
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 587 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 417
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 531 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 586
Query: 416 GHISRNCP 393
GHI+ NCP
Sbjct: 587 GHIAWNCP 594
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 644 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 513
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 557 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 601
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 698 ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 588
EC Q G S F + CF+CN GH A +C ++
Sbjct: 561 ECQQSGW-HMASCFKLKNRACFRCNEMGHIAWNCPKK 596
>L23646-12|AAL02516.1| 2186|Caenorhabditis elegans C. elegans RETR-1
protein, isoformb protein.
Length = 2186
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = -1
Query: 533 QSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG-HISRNCPDGTKTCYVCGKP 357
Q+P + C +C + G C + +++A+Q C C +SG H++ + C+ C +
Sbjct: 539 QNPSD-RCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNRACFRCNEM 597
Query: 356 GHISREC 336
GHI+ C
Sbjct: 598 GHIAWNC 604
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Frame = -1
Query: 644 EKCFKCNRTG-HF---ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIA 480
++C C + G H ++ K+ A +C C +G C + + +C+ CN+ GHIA
Sbjct: 543 DRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASCFKLKNR-ACFRCNEMGHIA 601
Query: 479 RNCPE 465
NCP+
Sbjct: 602 WNCPK 606
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -1
Query: 587 ADRCYRCNGTGHIARECAQ-SPDEPS--CYNCNKTGHIARNCPEGGRESATQTCYNCNKS 417
+DRC C G C++ S D S C C ++G +C + + C+ CN+
Sbjct: 542 SDRCSDCQQRGWHMFWCSKKSKDNASQKCDECQQSGWHMASC----FKLKNRACFRCNEM 597
Query: 416 GHISRNCP 393
GHI+ NCP
Sbjct: 598 GHIAWNCP 605
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 644 EKCFKCNRTGHFARDCKEEADR-CYRCNGTGHIARECAQSPDEPS 513
+KC +C ++G C + +R C+RCN GHIA C + + S
Sbjct: 568 QKCDECQQSGWHMASCFKLKNRACFRCNEMGHIAWNCPKKNENTS 612
Score = 31.5 bits (68), Expect = 0.63
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 698 ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEE 588
EC Q G S F + CF+CN GH A +C ++
Sbjct: 572 ECQQSGW-HMASCFKLKNRACFRCNEMGHIAWNCPKK 607
>Z83127-1|CAB05630.1| 160|Caenorhabditis elegans Hypothetical
protein T23F6.1 protein.
Length = 160
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/83 (33%), Positives = 32/83 (38%), Gaps = 1/83 (1%)
Frame = +2
Query: 386 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCG-PSCCSCNTTARPGSVRTRALCAPC 562
C S G CG+TCC APP S CG P C C V T C C
Sbjct: 66 CGCGSMGMCGQTCC--------PSAPPPCS---CGTPGCMQCVQQTVLVPVTTTTCCKCC 114
Query: 563 RYICSNGQPLPCNPSQSVLCGCT 631
+ +C+N C CGCT
Sbjct: 115 QPVCTNA----CTNGGGCSCGCT 133
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -1
Query: 515 SCYNCNKTGHIARNCPE-GGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRE 339
+C+NC++ GH A CP G+ Q ++ I TCY CG+ GH +
Sbjct: 205 TCHNCHERGHKATTCPHLPGQTRQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 338 C 336
C
Sbjct: 265 C 265
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = -1
Query: 608 ARDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYN 429
A+ +A C+ C+ GH A C P + N + + + + + TCY
Sbjct: 196 AKPTYSQAITCHNCHERGHKATTCPHLPGQTR-QNQDHHHRVDLSLIPDKKNLSDVTCYK 254
Query: 428 CNKSGHISRNCPDG 387
C + GH + C G
Sbjct: 255 CGEKGHYANRCHKG 268
Score = 35.1 bits (77), Expect = 0.052
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = -1
Query: 638 CFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPDEPS-----CYNCNKTGHIARN 474
C C+ GH A C + R N H + + PD+ + CY C + GH A
Sbjct: 206 CHNCHERGHKATTCPHLPGQT-RQNQDHHHRVDLSLIPDKKNLSDVTCYKCGEKGHYANR 264
Query: 473 CPEGGRESATQTCY 432
C +G + T +
Sbjct: 265 CHKGALAFLSNTAH 278
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 512 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 396
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -1
Query: 617 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 462
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = -1
Query: 437 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 336
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 512 CYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNC 396
C NC H + CP+ + C NC GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Frame = -1
Query: 617 GHFARDCKEEADRCYRCNGTGHIARECAQSP---DEPSCYNCNKTGHIARNC--PEG 462
G F + RC C H + EC +P ++ C NC GHI+++C P+G
Sbjct: 417 GTFRPEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKG 473
Score = 35.1 bits (77), Expect = 0.052
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = -1
Query: 437 CYNCNKSGHISRNCPDGTKT-----CYVCGKPGHISREC 336
C NC H S CPD C CG GHIS++C
Sbjct: 430 CSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDC 468
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN----GT 558
C GH A C + D N + C CN GH+ C C T
Sbjct: 1830 CECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPT 1887
Query: 557 GHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI--- 408
+ A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1888 NNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLT 1946
Query: 407 -SRNCPDGTKTCYVC 366
SR+C + CY+C
Sbjct: 1947 DSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = -1
Query: 716 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 552
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 551 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 384
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 383 KTC 375
C
Sbjct: 2005 GGC 2007
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN----GT 558
C GH A C + D N + C CN GH+ C C T
Sbjct: 1830 CECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPT 1887
Query: 557 GHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI--- 408
+ A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1888 NNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLT 1946
Query: 407 -SRNCPDGTKTCYVC 366
SR+C + CY+C
Sbjct: 1947 DSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = -1
Query: 716 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 552
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 551 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 384
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 383 KTC 375
C
Sbjct: 2005 GGC 2007
>AC006672-5|AAM98003.1| 42|Caenorhabditis elegans Hypothetical
protein K08D12.3b protein.
Length = 42
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 443 QTCYNCNKSGHISRNCPDG 387
+ CY C + GHISRNCP+G
Sbjct: 4 RNCYKCQQPGHISRNCPNG 22
Score = 35.5 bits (78), Expect = 0.039
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 515 SCYNCNKTGHIARNCPEG 462
+CY C + GHI+RNCP G
Sbjct: 5 NCYKCQQPGHISRNCPNG 22
Score = 31.1 bits (67), Expect = 0.84
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 383 KTCYVCGKPGHISREC 336
+ CY C +PGHISR C
Sbjct: 4 RNCYKCQQPGHISRNC 19
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 638 CFKCNRTGHFARDCKE-EADRCYRCNGTGHI 549
C+KC + GH +R+C E+D R G G +
Sbjct: 6 CYKCQQPGHISRNCPNGESDGGRRGGGGGGV 36
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN----GT 558
C GH A C + D N + C CN GH+ C C T
Sbjct: 1830 CECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPT 1887
Query: 557 GHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI--- 408
+ A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1888 NNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLT 1946
Query: 407 -SRNCPDGTKTCYVC 366
SR+C + CY+C
Sbjct: 1947 DSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = -1
Query: 716 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 552
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 551 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 384
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 383 KTC 375
C
Sbjct: 2005 GGC 2007
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 15/135 (11%)
Frame = -1
Query: 725 CNRTGHFARECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCN----GT 558
C GH A C + D N + C CN GH+ C C T
Sbjct: 1830 CECNGHSAT-CDPDTGICTDCEHNTNGDHCEFCNE-GHYGNATNGSPYDCMACACPFAPT 1887
Query: 557 GHIARECAQSPDEPSCYNCN-KTGHIARNCPE------GGRESATQTCYNCNKSGHI--- 408
+ A+ C S +E CN K G+ C G + + ++C C +G+
Sbjct: 1888 NNFAKSCDVS-EEGQLLQCNCKPGYTGDRCDRCASGFFGHPQISGESCSPCQCNGNNNLT 1946
Query: 407 -SRNCPDGTKTCYVC 366
SR+C + CY+C
Sbjct: 1947 DSRSCHPNSGDCYLC 1961
Score = 31.9 bits (69), Expect = 0.48
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 9/123 (7%)
Frame = -1
Query: 716 TGHFARECT---QGGVVSRDSGFNRQREKCFKCNRTGHFARD--CKEEADRCYRCNGTGH 552
T +FA+ C +G ++ + ++C +C +G F E C +CNG +
Sbjct: 1887 TNNFAKSCDVSEEGQLLQCNCKPGYTGDRCDRC-ASGFFGHPQISGESCSPC-QCNGNNN 1944
Query: 551 IARECAQSPDEPSCYNC--NKTGHIARNCPEG--GRESATQTCYNCNKSGHISRNCPDGT 384
+ + P+ CY C N G +C G + C +C S S+ C + +
Sbjct: 1945 LTDSRSCHPNSGDCYLCEQNTDGRHCESCAAWFYGDAVTAKNCSSCECSQCGSQYCDNKS 2004
Query: 383 KTC 375
C
Sbjct: 2005 GGC 2007
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/111 (26%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Frame = -1
Query: 701 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 522
R C Q + + GF K C+ G DC +++ +C C G R+C Q
Sbjct: 825 RRCDQCAIGTY--GFGPSGCKKCDCDAVGSLGNDCDKQSGQCV-CREKGIYGRQCNQCQP 881
Query: 521 E----PSCYNCNKTGHIARNCPEGGRESATQTCYNCN--KSGHISRNCPDG 387
P C C H A C + ++ C C +GH C DG
Sbjct: 882 GFWGFPECRTCQCNDH-ANIC-----DQSSGACIECRDLTTGHYCDRCQDG 926
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/55 (32%), Positives = 23/55 (41%)
Frame = -1
Query: 578 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSG 414
CY+C GH++++C QS N KT H N E G T N G
Sbjct: 313 CYKCKVVGHVSKDCPQSSTNSGVTN-RKTEHSEVNTLEVGSGRQTSPSLRLNVEG 366
Score = 32.3 bits (70), Expect = 0.36
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 518 PSCYNCNKTGHIARNCPEGGRES 450
P CY C GH++++CP+ S
Sbjct: 311 PYCYKCKVVGHVSKDCPQSSTNS 333
Score = 29.1 bits (62), Expect = 3.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 437 CYNCNKSGHISRNCPDGT 384
CY C GH+S++CP +
Sbjct: 313 CYKCKVVGHVSKDCPQSS 330
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.090
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -1
Query: 578 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 399
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.090
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = -1
Query: 578 CYRCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRN 399
C +C+GT + + SC CN TG +++ +GG T TC C SGH ++N
Sbjct: 191 CLKCHGT-----QVEPGHKKTSCPYCNGTGAVSQRL-QGGFFYQT-TCNRCRGSGHYNKN 243
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 33.9 bits (74), Expect = 0.12
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Frame = +2
Query: 389 RRDSCGRCGRTCCSYSRSASQ-TPAPPRDSSVRC-GPSC---CS--CNTTARPGSVRTRA 547
RR CGR +CCS S S S P C P C CS CN ++ +
Sbjct: 31 RRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQQQCSNQCNQQCTSITISSGP 90
Query: 548 LCAPCRYICSNGQPLP 595
C+ C+ CS+ P
Sbjct: 91 SCSSCQSACSSACTTP 106
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/77 (25%), Positives = 29/77 (37%)
Frame = +2
Query: 398 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAPCRYICS 577
S C +C + SA T + C SC SC+ + + PC C+
Sbjct: 172 SSRNCQNSCQNQCSSACTTMTCRQTCQNTCLGSCNSCSGGGCNSNNSNLVVVTPCERSCN 231
Query: 578 NGQPLPCNPSQSVLCGC 628
+G C+ S S L C
Sbjct: 232 SGCRSTCS-STSTLSVC 247
>Z81129-4|CAB03405.1| 330|Caenorhabditis elegans Hypothetical
protein T23F1.6 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 5/82 (6%)
Frame = +2
Query: 398 SCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSC---CS--CNTTARPGSVRTRALCAPC 562
+C +C +C + + + +C P C C C T A C
Sbjct: 231 NCQQCQNSCQNSNTQTITIYVQASPQTSQCVPQCQQQCQQQCQTRTTASQQCAPACSTSC 290
Query: 563 RYICSNGQPLPCNPSQSVLCGC 628
C+ + C P Q+ CGC
Sbjct: 291 NQSCNQPAQMACQPMQNSQCGC 312
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -1
Query: 551 IARECAQ--SPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPDG 387
+ R+C Q +P + C+ C++ GH +CP+ + + N + R+ G
Sbjct: 1342 LLRKCNQGSAPTDRQCHQCHRIGHFVESCPQRALAKEARKRFGSNSTNSSYRSNDSG 1398
Score = 31.1 bits (67), Expect = 0.84
Identities = 25/81 (30%), Positives = 34/81 (41%)
Frame = -1
Query: 701 RECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGHIARECAQSPD 522
R+C QG + +RQ C +C+R GHF C + A AR+ S
Sbjct: 1344 RKCNQGSAPT-----DRQ---CHQCHRIGHFVESCPQRA--------LAKEARKRFGSNS 1387
Query: 521 EPSCYNCNKTGHIARNCPEGG 459
S Y N +G +N EGG
Sbjct: 1388 TNSSYRSNDSGRGFKNGEEGG 1408
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 31.9 bits (69), Expect = 0.48
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = -3
Query: 483 RTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVL-RVRQARPHLARVRRGAELAAAT 307
RT L R G + ++V LP SR +DV+ + RQA P + RRG +++
Sbjct: 643 RTTLPRSGTAQWKNEYSDGEEVTEKLPVESRDWRDVINQQRQAAPGNSADRRGIAATSSS 702
Query: 306 LSPLQSTMYIMMPRTDDKQRTPRATHDNRLQYRCRAASAPQTEE 175
LS L S YI R +K+R + +Y A P E
Sbjct: 703 LSNLPS--YI--NRRMEKEREREIEYRRDREYSMPPADPPVITE 742
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -1
Query: 527 PDEPSCYNCNKTGHIARNC---PEGG-RESATQTCYNCNKSGHISRNCP 393
P+ C C + G +C P+ RE C+ C + GHIS CP
Sbjct: 576 PENGICAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCP 624
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Frame = -1
Query: 578 CYRCNGTGHIARECAQSPDE-------PSCYNCNKTGHIARNCPE 465
C C G C+ +P P C+ C + GHI+ CP+
Sbjct: 581 CAECKQVGGHEPSCSLAPKTWKRERPPPQCFTCGEMGHISTYCPK 625
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 401 CGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRALCAP 559
C +C TC ++ Q AP ++ P C C TT + + + CAP
Sbjct: 174 CQQCQNTCQQFAPVCQQQCAP--QCTISSAPQCQQCQTTCQQFAPVCQQQCAP 224
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Frame = +2
Query: 398 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 559
S +C TC S S+ TP P + V+C PSC +C + P +V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAAVQCVPQCQQQ 158
Query: 560 CRYICSNGQPL-PCNPSQSVLC 622
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 386 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 523
CR C C RTCC + T P CG CC C R
Sbjct: 79 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 121
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 386 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 523
CR C C RTCC + T P CG CC C R
Sbjct: 82 CRPKCCCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 124
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/76 (31%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Frame = +2
Query: 416 RTCCSYSRSASQTPAPPRDSSVRCGPS-CCSC----NTTARPGSVRTRALCA-PCRY--- 568
RTCC A+ P PP P+ CC T R G C PC Y
Sbjct: 130 RTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCGCGRPCCYYQN 189
Query: 569 --ICSNGQPLPCNPSQ 610
C+ GQ C P Q
Sbjct: 190 PTCCNQGQKACCPPEQ 205
>Z92828-7|CAE48500.1| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -1
Query: 599 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 423
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 422 KSGHISRNCPDGTKTC 375
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z81561-2|CAB04551.2| 700|Caenorhabditis elegans Hypothetical
protein K03D10.1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = -1
Query: 599 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 423
C+E+ D C + C S D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVASDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 422 KSGHISRNCPDGTKTC 375
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Frame = +2
Query: 401 CG--RCGRTCCSYSRSASQTPAPPRDSSVRCGPS-----CCSCNTTARPGSVRTRALCAP 559
CG R +CC Y A P PP +S CGPS CC P
Sbjct: 71 CGAPRPSPSCCPYVPPAPLPPPPP-PASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTP 129
Query: 560 CRYICSNGQPLPCNP 604
+C P+P NP
Sbjct: 130 SPLVCCKQAPVPENP 144
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 7/82 (8%)
Frame = +2
Query: 398 SCGRCGRTCC-SYSRSASQTPAPPRDSSVRCGPSCC-SCNTTA---RPGSVRTRALC-AP 559
S +C TC S S+ TP P + V+C PSC +C + P V+ C
Sbjct: 101 SVSQCQSTCQQSCQTSSCYTPTTP--APVQCQPSCMPACEQSCVVQTPAPVQCVPQCQQQ 158
Query: 560 CRYICSNGQPL-PCNPSQSVLC 622
C+ C QP+ C P C
Sbjct: 159 CQQQCVQTQPIQQCQPQCQQQC 180
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 395 PD-GTKTCYVCGKPGHISRECDEAR 324
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 395 PD-GTKTCYVCGKPGHISRECDEAR 324
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -1
Query: 395 PD-GTKTCYVCGKPGHISRECDEAR 324
PD GT CY C + H ++ CDEAR
Sbjct: 198 PDCGTLFCYHCKREWHSNQTCDEAR 222
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Frame = +2
Query: 407 RCGRTCCSYSRSASQTPAPPRDSSVRCGPSCC-SCNTTARPGSVRTRALCAP-CRYIC-S 577
+C C ++ PP SS C SC C A C P C+ C S
Sbjct: 292 KCSSQCVEQQQAQIVVVQPPTSSSNNCASSCMPQCTPQCVQQQTICAAACQPSCQSSCSS 351
Query: 578 NGQPL-PCNPSQSVLC 622
N Q + C PS C
Sbjct: 352 NAQCVQACLPSCESSC 367
>AF026207-2|AAK71372.1| 233|Caenorhabditis elegans Hypothetical
protein H42K12.2 protein.
Length = 233
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 416 RTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTARPGSVRTRA 547
RTCC SA+ P+ S + C P CNT AR ++R A
Sbjct: 149 RTCCGCVSSAASGPS---SSLILCFPGGRRCNTHARTEALRGTA 189
>Z81071-6|CAB03010.1| 464|Caenorhabditis elegans Hypothetical
protein F28F8.7 protein.
Length = 464
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 437 CYNCNKSGHISRNCPDGTKTCYVC 366
C NCNK+ PD TK C +C
Sbjct: 302 CQNCNKALKYYDPIPDDTKLCLIC 325
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 29.5 bits (63), Expect = 2.6
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 437 CYNCNKSGHISRNCP 393
C++C + GHISR CP
Sbjct: 170 CFHCQEHGHISRMCP 184
Score = 28.3 bits (60), Expect = 5.9
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -1
Query: 512 CYNCNKTGHIARNCPE 465
C++C + GHI+R CP+
Sbjct: 170 CFHCQEHGHISRMCPK 185
>AL132952-16|CAC70119.1| 107|Caenorhabditis elegans Hypothetical
protein Y51H4A.26 protein.
Length = 107
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = -1
Query: 608 ARDCKEEAD-RCYRCNGTGHIARECAQSPDEPSCYNCNKTGH----IARNCPE 465
A+ C+ D + Y+ GH R+C D P Y C K G I +NCP+
Sbjct: 37 AKKCENYFDCQQYQTCIFGHCVRKCTSERDCPLGYICFKNGDGQRCIKKNCPK 89
>AC084159-15|AAK39353.1| 418|Caenorhabditis elegans Hypothetical
protein Y73B3A.13 protein.
Length = 418
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 437 CYNCNKSGHISRNCPDGTKTCYVC 366
C NCNK+ PD TK C +C
Sbjct: 281 CQNCNKALKYYDPIPDDTKLCLIC 304
>Z81496-9|CAB04065.1| 153|Caenorhabditis elegans Hypothetical
protein F09C6.10 protein.
Length = 153
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/76 (22%), Positives = 26/76 (34%)
Frame = -1
Query: 569 CNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRESATQTCYNCNKSGHISRNCPD 390
C + E P +P C N+ + C G + T CN+ +I N
Sbjct: 36 CQSKCGVPLEIRMKPTKPGCKKWNECDDNEKQCASGPKLQIIYTNNVCNQFVNICENREY 95
Query: 389 GTKTCYVCGKPGHISR 342
CG P +S+
Sbjct: 96 ANWNMQKCGIPHVVSK 111
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +2
Query: 386 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 523
CR C C RTCC +R + CG CC C R
Sbjct: 77 CRPKCCCTCCRTCCC-TRCCTCCRPCCCGCGCGCGCGCCGCGGGGR 121
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 386 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 523
CRR C C RTCC + T P CG CC C R
Sbjct: 95 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 135
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Frame = +2
Query: 398 SCGR-CGRTC-------CSYSRSASQTPAPPRDSSVRCGPSCCS-CNTTARPGSVRTRAL 550
SC R C R C S S++ +QTP + G C S C+ T R S R
Sbjct: 122 SCNRSCSRVCQSNPSASSSQSQTTTQTPLKVSIKVLDDGAKCMSTCSDTCR-SSCSNRVS 180
Query: 551 CAPCRYICSNGQPLPCNPSQS 613
+ C C N C PSQS
Sbjct: 181 QSTCDATCQNTCSSMC-PSQS 200
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 386 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 523
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +2
Query: 386 CRRDSCGRCGRTCCSYSRSASQTPAPPRDSSVRCGPSCCSCNTTAR 523
CRR C C RTCC + T P CG CC C R
Sbjct: 96 CRR--CCTCCRTCCC---TRCCTCCRPCCCGCGCGCGCCGCGGGGR 136
>U20861-8|AAA62297.3| 372|Caenorhabditis elegans Hypothetical
protein C28H8.9a protein.
Length = 372
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 593 EEADRCYRCNGTGHIARECAQSPDEPSCYNCNKTGH 486
E + C C+GT + + D SC++C ++GH
Sbjct: 252 EISTSCDFCSGTAFMNKNTKLPEDLVSCHDCGRSGH 287
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 653 RQREKCFKCNRTGHFARDCKEEA 585
R + +C C GH AR+CK++A
Sbjct: 571 RFKGQCHYCKNVGHMARNCKKKA 593
>AF025471-8|AAB71060.1| 1019|Caenorhabditis elegans Hypothetical
protein R52.2 protein.
Length = 1019
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = -1
Query: 725 CNRTGHFAR--ECTQGGVVSRDSGFNRQREKCFKCNRTGHFARDCKEEADRCYRCNGTGH 552
C+ T H R EC R+ CF C R+GH C C C G H
Sbjct: 317 CSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKCSRPR-TCNHCKGNHH 375
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Frame = -1
Query: 512 CYNCNKTGHIARN--CP-----EGGRESATQT--CYNCNKSGHISRNCPDGTKTCYVCGK 360
C C+ T H+ R+ CP E + A + C+ C +SGH C +TC C K
Sbjct: 314 CIFCSSTSHVHRHEECPIFNTAEARIQKAREIGLCFGCLRSGHQRSKC-SRPRTCNHC-K 371
Query: 359 PGHISREC 336
H + C
Sbjct: 372 GNHHTVFC 379
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -1
Query: 605 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 429
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 428 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 327
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -1
Query: 605 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 429
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 428 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 327
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -1
Query: 605 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 429
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 2743 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 2795
Query: 428 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 327
CN G N TC VC G +C A
Sbjct: 2796 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 2827
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -1
Query: 605 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 429
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 428 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 327
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AL110477-14|CAB54336.2| 224|Caenorhabditis elegans Hypothetical
protein Y113G7B.24 protein.
Length = 224
Score = 28.7 bits (61), Expect = 4.5
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 3/95 (3%)
Frame = -3
Query: 486 HRTELSRGGAGVCDADLL*LQQVRPHLPQLSRRHQDVLRVRQARPHL---ARVRRGAELA 316
HR EL R G D LQ++ + +H+ R + + L + ++ E A
Sbjct: 80 HRVELQRIGFITSDYVRCRLQKIESNPHDAIDQHKK--RKEEGKSDLLSESEMKFAEEYA 137
Query: 315 AATLSPLQSTMYIMMPRTDDKQRTPRATHDNRLQY 211
A + Q T+ MP K PR HD+ + Y
Sbjct: 138 LAESNLFQKTVLEFMPAALKKMPVPRGDHDDVMVY 172
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 28.7 bits (61), Expect = 4.5
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 377 CYVCGKPGHISREC 336
CY CGK GH + EC
Sbjct: 411 CYYCGKRGHTANEC 424
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/94 (30%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Frame = -1
Query: 605 RDCKEEADRCYRCNGTGHIARECAQSPDEPSCYNCN-KTGHIARNCPEGGRESATQTCYN 429
RD E A C+G H C D Y C G+I N E GR C
Sbjct: 3327 RDVDECALGLNNCSGVAH----CI---DRAVGYTCKCPDGYIDGNPDEPGRVCGALLCDL 3379
Query: 428 CNKSGHISRNCPDGTKTCYVCGKPGHISRECDEA 327
CN G N TC VC G +C A
Sbjct: 3380 CNAHGDCVHNTATNNITC-VC-TDGWTGPQCQVA 3411
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 28.7 bits (61), Expect = 4.5
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 389 RRDSCGRCGRTCCSYSRSASQTPAP-PRDSSVR-CGPSCCSCNTTARPGSVRTRALCAPC 562
R+ C R G S + SQ+P R+ + R CG SC TT RP + + + C
Sbjct: 88 RQAQCSRPGTGFGSSTPFPSQSPQRCGRNETFRTCGSSCEPSCTTPRPQACTMQCIVNVC 147
Query: 563 RYICSNG 583
+ CS G
Sbjct: 148 Q--CSEG 152
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 461 GRESATQTCYNCNKSGHISRNCP 393
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 461 GRESATQTCYNCNKSGHISRNCP 393
G T TC C++ GH +NCP
Sbjct: 150 GPPPPTYTCNRCSQPGHWYKNCP 172
>AF342986-1|AAL73338.1| 700|Caenorhabditis elegans KAL-1 protein.
Length = 700
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = -1
Query: 599 CKEEADRCYRCNGTGHIARECAQSPDEPSCYN-CNKTGHIARNCPEGGRESATQTCYNCN 423
C+E+ D C + C D +C + C+ I + P + Q+ Y C+
Sbjct: 66 CREQFDDIKACK------KSCVPRDDRETCEDSCHYLQRIYQEKPGACPSVSNQSNYECS 119
Query: 422 KSGHISRNCPDGTKTC 375
+ CP+ K C
Sbjct: 120 ALCQMDGECPETQKCC 135
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -1
Query: 473 CPEGGRESATQTCYNCNKSGHISRNCPDGTKTCYVCGKPGHISRECDEARN 321
CP ++ QTC + + R C + + C +C P HI+ C A++
Sbjct: 925 CPPCKKDHPLQTC--TMGAIEVKRFCINNGR-CTICSSPSHITGNCSYAQS 972
>Z54216-1|CAA90943.1| 308|Caenorhabditis elegans Hypothetical
protein T24H10.1 protein.
Length = 308
Score = 27.9 bits (59), Expect = 7.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 401 CGRCGRTCCSYSRSASQTPAPPRDSSVRC 487
CG+CG+ C+Y++ +++ P + V C
Sbjct: 270 CGKCGKKNCTYTQLQTRSSDEPMTTFVFC 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,343
Number of Sequences: 27780
Number of extensions: 353964
Number of successful extensions: 1835
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 1334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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