Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15n14
         (462 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...   167   2e-41
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...   167   2e-41
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...   167   2e-41
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...   167   2e-41
AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20 p...   109   3e-24
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.               30   4.5  
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro...    30   4.5  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  167 bits (406), Expect = 2e-41
 Identities = 81/98 (82%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
 Frame = -1

Query: 336 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 160
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 159 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQI 46
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQI
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQI 101


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  167 bits (406), Expect = 2e-41
 Identities = 81/98 (82%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
 Frame = -1

Query: 336 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 160
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 159 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQI 46
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQI
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQI 101


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  167 bits (406), Expect = 2e-41
 Identities = 81/98 (82%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
 Frame = -1

Query: 336 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 160
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 159 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQI 46
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQI
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQI 101


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  167 bits (406), Expect = 2e-41
 Identities = 81/98 (82%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
 Frame = -1

Query: 336 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 160
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 159 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQI 46
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQI
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQI 101


>AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20
           protein.
          Length = 60

 Score =  109 bits (263), Expect = 3e-24
 Identities = 49/51 (96%), Positives = 50/51 (98%)
 Frame = -1

Query: 198 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQI 46
           KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQI
Sbjct: 1   KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQI 51


>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
          Length = 1088

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -3

Query: 397 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALTREGL 242
           +  +S  E +  +G R  SV QRHR TP R + P    +D SY  +     EGL
Sbjct: 511 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 564


>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
           protein.
          Length = 1080

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = -3

Query: 397 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALTREGL 242
           +  +S  E +  +G R  SV QRHR TP R + P    +D SY  +     EGL
Sbjct: 503 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 556


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,683,272
Number of Sequences: 237096
Number of extensions: 1665320
Number of successful extensions: 3323
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3323
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)