Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15m23
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71480-1|CAA96104.1|  209|Anopheles gambiae GSTD2 protein protein.     30   0.078
AF071163-1|AAC79999.1|  218|Anopheles gambiae glutathione S-tran...    29   0.18 
AF071160-4|AAC79992.1|  218|Anopheles gambiae glutathione S-tran...    29   0.18 
AF071162-1|AAC79998.1|  216|Anopheles gambiae glutathione S-tran...    26   1.3  
AF071160-2|AAC79994.1|  216|Anopheles gambiae glutathione S-tran...    26   1.3  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   5.1  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   5.1  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   5.1  

>Z71480-1|CAA96104.1|  209|Anopheles gambiae GSTD2 protein protein.
          Length = 209

 Score = 29.9 bits (64), Expect = 0.078
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
 Frame = -1

Query: 674 RRRLKPPQGLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAPAANL-----PHVLRWYN 510
           R+RL   + +  LN +L+E  +V+G   + AD+ +F  +  A           HV RWY 
Sbjct: 127 RKRLAFEKAVELLNIFLSEHEFVAGSKMTIADISLFATLATACTLGFILRPYVHVDRWYV 186

Query: 509 QIASYTP 489
            + +  P
Sbjct: 187 TMVASCP 193


>AF071163-1|AAC79999.1|  218|Anopheles gambiae glutathione
           S-transferase D1-3 protein.
          Length = 218

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
 Frame = -1

Query: 653 QGLNDLNQYLAEKSYVSGYT-PSQADVQVFEQVGKAPAANLP-----HVLRWYNQIASYT 492
           Q L  LN +L  + +V+G   P+ AD  +   +    AA        ++ RWY Q  +  
Sbjct: 139 QALEFLNTFLEGERFVAGGDDPTIADFSILASIATFDAAGYDLRRYENIHRWYEQTGNIA 198

Query: 491 PAERK 477
           PA  K
Sbjct: 199 PAADK 203


>AF071160-4|AAC79992.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
 Frame = -1

Query: 653 QGLNDLNQYLAEKSYVSGYT-PSQADVQVFEQVGKAPAANLP-----HVLRWYNQIASYT 492
           Q L  LN +L  + +V+G   P+ AD  +   +    AA        ++ RWY Q  +  
Sbjct: 139 QALEFLNTFLEGERFVAGGDDPTIADFSILASIATFDAAGYDLRRYENIHRWYEQTGNIA 198

Query: 491 PAERK 477
           PA  K
Sbjct: 199 PAADK 203


>AF071162-1|AAC79998.1|  216|Anopheles gambiae glutathione
           S-transferase D1-4 protein.
          Length = 216

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 584 ADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAE--RKTWSQGTSP 453
           A +  FE  G   +A + +VLRWY  +    PA    ++W++   P
Sbjct: 165 ATLTTFEVAGYDFSAYV-NVLRWYKSMPELIPASDTNRSWAEAARP 209


>AF071160-2|AAC79994.1|  216|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 216

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
 Frame = -1

Query: 584 ADVQVFEQVGKAPAANLPHVLRWYNQIASYTPAE--RKTWSQGTSP 453
           A +  FE  G   +A + +VLRWY  +    PA    ++W++   P
Sbjct: 165 ATLTTFEVAGYDFSAYV-NVLRWYKSMPELIPASDTNRSWAEAARP 209


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 123 NLQFIYAIPNRHKFGGSPEKAFHF-NSAYLVFHFLHI 230
           NL   +   N H+FGG P +   F  SA  V   LH+
Sbjct: 334 NLALRWVRDNIHRFGGDPSRVTLFGESAGAVSVSLHL 370


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 123 NLQFIYAIPNRHKFGGSPEKAFHF-NSAYLVFHFLHI 230
           NL   +   N H+FGG P +   F  SA  V   LH+
Sbjct: 334 NLALRWVRDNIHRFGGDPSRVTLFGESAGAVSVSLHL 370


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = +3

Query: 123 NLQFIYAIPNRHKFGGSPEKAFHF-NSAYLVFHFLHI 230
           NL   +   N H+FGG P +   F  SA  V   LH+
Sbjct: 220 NLALRWVRDNIHRFGGDPSRVTLFGESAGAVSVSLHL 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,125
Number of Sequences: 2352
Number of extensions: 14217
Number of successful extensions: 46
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)