Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15m21
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase... 181 2e-45
AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase... 181 2e-45
AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase... 181 2e-45
AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase... 181 2e-45
AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase... 180 3e-45
BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein. 180 5e-45
Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase p... 178 1e-44
AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase... 176 6e-44
AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein pr... 169 5e-42
AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase pro... 169 5e-42
BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein. 157 3e-38
AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase... 42 0.002
S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase p... 36 0.15
AK023848-1|BAB14700.1| 1867|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating B... 33 1.1
AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein. 33 1.1
>BC062303-1|AAH62303.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 181 bits (440), Expect = 2e-45
Identities = 82/145 (56%), Positives = 105/145 (72%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWG 435
FQ++YY + + CFILPT++P YFW E++ N+ FVAT RY +LN TWLVNSAAH +G
Sbjct: 213 FQRRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFG 272
Query: 434 GKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIG 255
+PYDKNI P ENI VS+ A+GEGFHNYHH+FP+DY +E +NFTT FI+ A +G
Sbjct: 273 YRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALG 331
Query: 254 WAYDLKTVSDEIIKNRVNRTGDGSH 180
AYD K VS I R+ RTGDG++
Sbjct: 332 LAYDRKKVSKAAILARIKRTGDGNY 356
>AF097514-1|AAD29870.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 181 bits (440), Expect = 2e-45
Identities = 82/145 (56%), Positives = 105/145 (72%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWG 435
FQ++YY + + CFILPT++P YFW E++ N+ FVAT RY +LN TWLVNSAAH +G
Sbjct: 213 FQRRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFG 272
Query: 434 GKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIG 255
+PYDKNI P ENI VS+ A+GEGFHNYHH+FP+DY +E +NFTT FI+ A +G
Sbjct: 273 YRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALG 331
Query: 254 WAYDLKTVSDEIIKNRVNRTGDGSH 180
AYD K VS I R+ RTGDG++
Sbjct: 332 LAYDRKKVSKAAILARIKRTGDGNY 356
>AB208982-1|BAD92219.1| 366|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 366
Score = 181 bits (440), Expect = 2e-45
Identities = 82/145 (56%), Positives = 105/145 (72%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWG 435
FQ++YY + + CFILPT++P YFW E++ N+ FVAT RY +LN TWLVNSAAH +G
Sbjct: 220 FQRRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFG 279
Query: 434 GKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIG 255
+PYDKNI P ENI VS+ A+GEGFHNYHH+FP+DY +E +NFTT FI+ A +G
Sbjct: 280 YRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALG 338
Query: 254 WAYDLKTVSDEIIKNRVNRTGDGSH 180
AYD K VS I R+ RTGDG++
Sbjct: 339 LAYDRKKVSKAAILARIKRTGDGNY 363
>AB032261-1|BAA93510.1| 359|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 359
Score = 181 bits (440), Expect = 2e-45
Identities = 82/145 (56%), Positives = 105/145 (72%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWG 435
FQ++YY + + CFILPT++P YFW E++ N+ FVAT RY +LN TWLVNSAAH +G
Sbjct: 213 FQRRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFG 272
Query: 434 GKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIG 255
+PYDKNI P ENI VS+ A+GEGFHNYHH+FP+DY +E +NFTT FI+ A +G
Sbjct: 273 YRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALG 331
Query: 254 WAYDLKTVSDEIIKNRVNRTGDGSH 180
AYD K VS I R+ RTGDG++
Sbjct: 332 LAYDRKKVSKAAILARIKRTGDGNY 356
>AL139819-4|CAH72824.1| 359|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 359
Score = 180 bits (439), Expect = 3e-45
Identities = 82/145 (56%), Positives = 105/145 (72%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWG 435
FQ++YY + + CFILPT++P YFW E++ N+ FVAT RY +LN TWLVNSAAH +G
Sbjct: 213 FQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFG 272
Query: 434 GKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIG 255
+PYDKNI P ENI VS+ A+GEGFHNYHH+FP+DY +E +NFTT FI+ A +G
Sbjct: 273 YRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALG 331
Query: 254 WAYDLKTVSDEIIKNRVNRTGDGSH 180
AYD K VS I R+ RTGDG++
Sbjct: 332 LAYDRKKVSKAAILARIKRTGDGNY 356
>BC005807-1|AAH05807.1| 355|Homo sapiens SCD protein protein.
Length = 355
Score = 180 bits (437), Expect = 5e-45
Identities = 82/144 (56%), Positives = 104/144 (72%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWG 435
FQ++YY + + CFILPT++P YFW E++ N+ FVAT RY +LN TWLVNSAAH +G
Sbjct: 213 FQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFG 272
Query: 434 GKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIG 255
+PYDKNI P ENI VS+ A+GEGFHNYHH+FP+DY +E +NFTT FI+ A +G
Sbjct: 273 YRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALG 331
Query: 254 WAYDLKTVSDEIIKNRVNRTGDGS 183
AYD K VS I R+ RTGDG+
Sbjct: 332 LAYDRKKVSKAAILARIKRTGDGN 355
>Y13647-1|CAA73998.1| 359|Homo sapiens stearoyl CoA desaturase
protein.
Length = 359
Score = 178 bits (433), Expect = 1e-44
Identities = 80/145 (55%), Positives = 104/145 (71%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWG 435
FQ++YY + + CFILPT++P YFW E++ N+ FVAT RY +LN TWLVNSAAH +G
Sbjct: 213 FQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFG 272
Query: 434 GKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIG 255
+PYDKNI P ENI VS+ A+GEGFHNYHH+FP+DY +E +NF T FI++ A +G
Sbjct: 273 YRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFNTFFIDWMAALG 331
Query: 254 WAYDLKTVSDEIIKNRVNRTGDGSH 180
YD K VS I R+ RTGDG++
Sbjct: 332 LTYDRKKVSKAAILARIKRTGDGNY 356
>AK222862-1|BAD96582.1| 359|Homo sapiens stearoyl-CoA desaturase
variant protein.
Length = 359
Score = 176 bits (428), Expect = 6e-44
Identities = 81/145 (55%), Positives = 104/145 (71%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWG 435
FQ++YY + + CFILPT++P YFW E++ N+ FVAT RY +LN TWLVNSAA +G
Sbjct: 213 FQRRYYKPGLLMMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAALLFG 272
Query: 434 GKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIG 255
+PYDKNI P ENI VS+ A+GEGFHNYHH+FP+DY +E +NFTT FI+ A +G
Sbjct: 273 YRPYDKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALG 331
Query: 254 WAYDLKTVSDEIIKNRVNRTGDGSH 180
AYD K VS I R+ RTGDG++
Sbjct: 332 LAYDRKKVSKAAILARIKRTGDGNY 356
>AL831891-1|CAD38567.1| 160|Homo sapiens hypothetical protein
protein.
Length = 160
Score = 169 bits (412), Expect = 5e-42
Identities = 75/146 (51%), Positives = 104/146 (71%)
Frame = -3
Query: 620 LRFQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHK 441
+R Q+KYY I + + CF++PT++P Y W ES N++F+A++ RYT LN++WLVNSAAH
Sbjct: 15 VRIQRKYYKISVVLMCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAHM 74
Query: 440 WGGKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAK 261
+G +PYDK+I P +N V++ A+GEGFHNYHHTFP+DY +E G N N TT FI+F
Sbjct: 75 YGNRPYDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLN-FNPTTWFIDFMCW 133
Query: 260 IGWAYDLKTVSDEIIKNRVNRTGDGS 183
+G A D K + +I+ R RTGD S
Sbjct: 134 LGLATDRKRATKPMIEARKARTGDSS 159
>AF389338-1|AAP31443.1| 330|Homo sapiens acyl-CoA-desaturase
protein.
Length = 330
Score = 169 bits (412), Expect = 5e-42
Identities = 75/146 (51%), Positives = 104/146 (71%)
Frame = -3
Query: 620 LRFQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHK 441
+R Q+KYY I + + CF++PT++P Y W ES N++F+A++ RYT LN++WLVNSAAH
Sbjct: 185 VRIQRKYYKISVVLMCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAHM 244
Query: 440 WGGKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAK 261
+G +PYDK+I P +N V++ A+GEGFHNYHHTFP+DY +E G N N TT FI+F
Sbjct: 245 YGNRPYDKHISPRQNPLVALGAIGEGFHNYHHTFPFDYSASEFGLN-FNPTTWFIDFMCW 303
Query: 260 IGWAYDLKTVSDEIIKNRVNRTGDGS 183
+G A D K + +I+ R RTGD S
Sbjct: 304 LGLATDRKRATKPMIEARKARTGDSS 329
>BC048971-1|AAH48971.1| 134|Homo sapiens SCD5 protein protein.
Length = 134
Score = 157 bits (381), Expect = 3e-38
Identities = 69/133 (51%), Positives = 95/133 (71%)
Frame = -3
Query: 581 IACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHKWGGKPYDKNIKPS 402
+ CF++PT++P Y W ES N++F+A++ RYT LN++WLVNSAAH +G +PYDK+I P
Sbjct: 2 LMCFVVPTLVPWYIWGESLWNSYFLASILRYTISLNISWLVNSAAHMYGNRPYDKHISPR 61
Query: 401 ENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAKIGWAYDLKTVSDE 222
+N V++ A+GEGFHNYHHTFP+DY +E G N N TT FI+F +G A D K +
Sbjct: 62 QNPLVALGAIGEGFHNYHHTFPFDYSASEFGLN-FNPTTWFIDFMCWLGLATDRKRATKP 120
Query: 221 IIKNRVNRTGDGS 183
+I+ R RTGD S
Sbjct: 121 MIEARKARTGDSS 133
>AL139819-3|CAH72823.1| 242|Homo sapiens stearoyl-CoA desaturase
(delta-9-desaturase) protein.
Length = 242
Score = 41.5 bits (93), Expect = 0.002
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFWNESW 525
FQ++YY + + CFILPT++P YFW E++
Sbjct: 213 FQRRYYKPGLLMMCFILPTLVPWYFWGETF 242
>S70284-1|AAB30631.1| 237|Homo sapiens stearoyl-CoA desaturase
protein.
Length = 237
Score = 35.5 bits (78), Expect = 0.15
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 614 FQKKYYLILMPIACFILPTVIPAYFW 537
FQ++YY + + CFILPT++P Y W
Sbjct: 211 FQRRYYKPGLLMMCFILPTLVPWYCW 236
>AK023848-1|BAB14700.1| 1867|Homo sapiens protein ( Homo sapiens cDNA
FLJ13786 fis, clone PLACE4000654, highly similar to Mus
musculus mRNA for ubiquitin conjugating enzyme. ).
Length = 1867
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 168 APEVVRAITGAVHTVLYDLVRYSFQIVCPSNF 263
APEV RA TGA T+++D V+ S PS+F
Sbjct: 1834 APEVCRATTGAEETLMHDQVKPSSSKELPSDF 1865
>AF265555-1|AAF75772.1| 4829|Homo sapiens ubiquitin-conjugating
BIR-domain enzyme APOLLON protein.
Length = 4829
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 168 APEVVRAITGAVHTVLYDLVRYSFQIVCPSNF 263
APEV RA TGA T+++D V+ S PS+F
Sbjct: 4796 APEVCRATTGAEETLMHDQVKPSSSKELPSDF 4827
>AB033115-1|BAA86603.2| 2793|Homo sapiens KIAA1289 protein protein.
Length = 2793
Score = 32.7 bits (71), Expect = 1.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 168 APEVVRAITGAVHTVLYDLVRYSFQIVCPSNF 263
APEV RA TGA T+++D V+ S PS+F
Sbjct: 2760 APEVCRATTGAEETLMHDQVKPSSSKELPSDF 2791
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,428,151
Number of Sequences: 237096
Number of extensions: 1929339
Number of successful extensions: 5299
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5291
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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