Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15m21
(622 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 158 3e-39
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 158 3e-39
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 152 2e-37
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 152 2e-37
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 145 3e-35
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 145 3e-35
Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical pr... 30 1.5
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF038615-4|AAB94143.1| 743|Caenorhabditis elegans Hypothetical ... 28 4.7
AF003390-2|AAP31432.1| 341|Caenorhabditis elegans Hypothetical ... 28 4.7
AF003390-1|AAB54271.2| 473|Caenorhabditis elegans Hypothetical ... 28 4.7
Z81092-1|CAB03144.1| 143|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z32682-5|CAA83613.1| 189|Caenorhabditis elegans Hypothetical pr... 28 6.2
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 158 bits (384), Expect = 3e-39
Identities = 72/143 (50%), Positives = 97/143 (67%)
Frame = -3
Query: 620 LRFQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHK 441
L FQ+K+Y L+ + CFILPT+IP YFW E+ AF+ A FRY F L+ TW +NSAAH
Sbjct: 188 LVFQRKHYFPLVILCCFILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHY 247
Query: 440 WGGKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAK 261
+G KPYD +I P EN+ ++ A+GEG HN+HHTFP DY+T+E + + N+T I+ A
Sbjct: 248 FGWKPYDSSITPVENVFTTIAAVGEGGHNFHHTFPQDYRTSEY-SLKYNWTRVLIDTAAA 306
Query: 260 IGWAYDLKTVSDEIIKNRVNRTG 192
+G YD KT DEII +V+ G
Sbjct: 307 LGLVYDRKTACDEIIGRQVSNHG 329
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 158 bits (384), Expect = 3e-39
Identities = 72/143 (50%), Positives = 97/143 (67%)
Frame = -3
Query: 620 LRFQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHK 441
L FQ+K+Y L+ + CFILPT+IP YFW E+ AF+ A FRY F L+ TW +NSAAH
Sbjct: 188 LVFQRKHYFPLVILCCFILPTIIPVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHY 247
Query: 440 WGGKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAK 261
+G KPYD +I P EN+ ++ A+GEG HN+HHTFP DY+T+E + + N+T I+ A
Sbjct: 248 FGWKPYDSSITPVENVFTTIAAVGEGGHNFHHTFPQDYRTSEY-SLKYNWTRVLIDTAAA 306
Query: 260 IGWAYDLKTVSDEIIKNRVNRTG 192
+G YD KT DEII +V+ G
Sbjct: 307 LGLVYDRKTACDEIIGRQVSNHG 329
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 152 bits (368), Expect = 2e-37
Identities = 70/143 (48%), Positives = 95/143 (66%)
Frame = -3
Query: 620 LRFQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHK 441
L FQ+K+Y L+ + CFILPT+IP YFW E+ AF+VA FRY F L+ TW +NSAAH
Sbjct: 187 LVFQRKHYFPLVILFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHY 246
Query: 440 WGGKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAK 261
+G KPYD ++ EN+ +V A+GEG HN+HHTFP DY+ +E + N+T I+ A
Sbjct: 247 FGWKPYDTSVSAVENVFTTVVAVGEGGHNFHHTFPQDYRASEY-SLIYNWTRVLIDTAAV 305
Query: 260 IGWAYDLKTVSDEIIKNRVNRTG 192
+G YD KT++DE I +V G
Sbjct: 306 LGLVYDRKTIADEFISRQVANHG 328
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 152 bits (368), Expect = 2e-37
Identities = 70/143 (48%), Positives = 95/143 (66%)
Frame = -3
Query: 620 LRFQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHK 441
L FQ+K+Y L+ + CFILPT+IP YFW E+ AF+VA FRY F L+ TW +NSAAH
Sbjct: 187 LVFQRKHYFPLVILFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHY 246
Query: 440 WGGKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAK 261
+G KPYD ++ EN+ +V A+GEG HN+HHTFP DY+ +E + N+T I+ A
Sbjct: 247 FGWKPYDTSVSAVENVFTTVVAVGEGGHNFHHTFPQDYRASEY-SLIYNWTRVLIDTAAV 305
Query: 260 IGWAYDLKTVSDEIIKNRVNRTG 192
+G YD KT++DE I +V G
Sbjct: 306 LGLVYDRKTIADEFISRQVANHG 328
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 145 bits (351), Expect = 3e-35
Identities = 69/143 (48%), Positives = 89/143 (62%)
Frame = -3
Query: 620 LRFQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHK 441
L FQ+K YL L+ I CF LPT IP W ES AF+ A LFRY F L+ TW +NS +H
Sbjct: 179 LMFQRKNYLPLVGIFCFALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHW 238
Query: 440 WGGKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAK 261
G +PYD +N+ S+ A+GEG HNYHHTFP DY+T+E LN+T I+F A
Sbjct: 239 VGWQPYDHQASSVDNLWTSIAAVGEGGHNYHHTFPQDYRTSEHA-EFLNWTRVLIDFGAS 297
Query: 260 IGWAYDLKTVSDEIIKNRVNRTG 192
IG YD KT +E+I+ + + G
Sbjct: 298 IGMVYDRKTTPEEVIQRQCKKFG 320
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 145 bits (351), Expect = 3e-35
Identities = 69/143 (48%), Positives = 89/143 (62%)
Frame = -3
Query: 620 LRFQKKYYLILMPIACFILPTVIPAYFWNESWINAFFVATLFRYTFILNVTWLVNSAAHK 441
L FQ+K YL L+ I CF LPT IP W ES AF+ A LFRY F L+ TW +NS +H
Sbjct: 179 LMFQRKNYLPLVGIFCFALPTFIPVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHW 238
Query: 440 WGGKPYDKNIKPSENISVSVFALGEGFHNYHHTFPWDYKTAELGNNRLNFTTNFINFFAK 261
G +PYD +N+ S+ A+GEG HNYHHTFP DY+T+E LN+T I+F A
Sbjct: 239 VGWQPYDHQASSVDNLWTSIAAVGEGGHNYHHTFPQDYRTSEHA-EFLNWTRVLIDFGAS 297
Query: 260 IGWAYDLKTVSDEIIKNRVNRTG 192
IG YD KT +E+I+ + + G
Sbjct: 298 IGMVYDRKTTPEEVIQRQCKKFG 320
>Z81510-4|CAB04164.1| 839|Caenorhabditis elegans Hypothetical
protein F21D9.5 protein.
Length = 839
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 214 FMISSDTVFKSYAHPILAKKLMKLVVKFNLL 306
F I T S AHPIL+K KLVV F+ +
Sbjct: 372 FQIHGQTPSHSSAHPILSKNFDKLVVGFSTM 402
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical
protein F55D10.1 protein.
Length = 955
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -3
Query: 260 IGWAYDLKTVSDEIIKNRVNRTGDG-SHYLWGW--GDKDLDKEEIKQAIR 120
+G Y TV DE++KN R + +LW W + D D+ ++++ ++
Sbjct: 68 VGVQYIYNTVIDELLKNPDRRFSFAETGFLWRWYTSNSDFDRHQLQKLVK 117
>Z81589-9|CAJ85769.1| 926|Caenorhabditis elegans Hypothetical
protein T08G5.5b protein.
Length = 926
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 179 YLWGWGDKDLDKEEIKQAIRINP 111
YL+ WG+KD KE I+ A+ NP
Sbjct: 132 YLFKWGEKDGHKEFIEVALDYNP 154
>Z81589-8|CAB04720.1| 923|Caenorhabditis elegans Hypothetical
protein T08G5.5a protein.
Length = 923
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 179 YLWGWGDKDLDKEEIKQAIRINP 111
YL+ WG+KD KE I+ A+ NP
Sbjct: 132 YLFKWGEKDGHKEFIEVALDYNP 154
>AF038615-4|AAB94143.1| 743|Caenorhabditis elegans Hypothetical
protein R02D3.2 protein.
Length = 743
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 173 WGWGDKDLDKEEIKQAIRINPKD 105
WGWGD D +++EI +PK+
Sbjct: 715 WGWGDDDGEEQEISSKEVESPKE 737
>AF003390-2|AAP31432.1| 341|Caenorhabditis elegans Hypothetical
protein R155.1b protein.
Length = 341
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 548 AYFWNESWINAFFVATLFRYTFILNVTWLVNSAA 447
++FW SW+ +F T+++Y WL+ A
Sbjct: 110 SFFWRWSWVTLWFRLTMYKYC----AMWLITEGA 139
>AF003390-1|AAB54271.2| 473|Caenorhabditis elegans Hypothetical
protein R155.1a protein.
Length = 473
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = -3
Query: 548 AYFWNESWINAFFVATLFRYTFILNVTWLVNSAA 447
++FW SW+ +F T+++Y WL+ A
Sbjct: 242 SFFWRWSWVTLWFRLTMYKYC----AMWLITEGA 271
>Z81092-1|CAB03144.1| 143|Caenorhabditis elegans Hypothetical
protein F58D12.1 protein.
Length = 143
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 611 QKKYYLILMPIACFILPTVIPAYFWNESWINAFF 510
+K Y+ + + +A I ++I FWN W+ FF
Sbjct: 66 RKPYFFLYVRVALMIFCSLI-CDFWNHFWLKIFF 98
>Z46787-5|CAA86743.1| 409|Caenorhabditis elegans Hypothetical
protein C16C10.5 protein.
Length = 409
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 554 IPAYF-WNESWINAFFVATLFRYTFILNVTWLVNSAAHKWGGKP 426
IP Y +N SW F+AT + WL SA H GG P
Sbjct: 161 IPVYVCFNRSWYR--FLATWLVFCIFSAFIWLKASAQHISGGTP 202
>Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical
protein F10F2.4 protein.
Length = 656
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -3
Query: 344 TFPWDYKTAELGNNRLNFTTNF 279
+ P + +T +LG NR+ FT+NF
Sbjct: 518 SLPENLRTLDLGENRVQFTSNF 539
>Z32682-5|CAA83613.1| 189|Caenorhabditis elegans Hypothetical
protein M04D8.5 protein.
Length = 189
Score = 27.9 bits (59), Expect = 6.2
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 581 IACFILPTVIPAYFWNESWINAFFVATLFRYTFI 480
I+ F LPT F + W+ FV L R FI
Sbjct: 56 ISLFTLPTAYVVVFGDRIWMRVAFVCQLTRMVFI 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,643,866
Number of Sequences: 27780
Number of extensions: 315909
Number of successful extensions: 868
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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