Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15m16
(473 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5BHY9 Cluster: GH10846p; n=7; Endopterygota|Rep: GH108... 119 3e-26
UniRef50_UPI0000D56F31 Cluster: PREDICTED: similar to CG5434-PA;... 100 3e-20
UniRef50_UPI0000DB784B Cluster: PREDICTED: similar to CG5434-PA;... 69 2e-13
UniRef50_Q60VE1 Cluster: Putative uncharacterized protein CBG195... 64 1e-09
UniRef50_O76094 Cluster: Signal recognition particle 72 kDa prot... 63 3e-09
UniRef50_P91240 Cluster: Signal recognition particle 72 kDa prot... 60 2e-08
UniRef50_A7RLD9 Cluster: Predicted protein; n=1; Nematostella ve... 60 3e-08
UniRef50_Q9FXD4 Cluster: F12A21.17; n=6; Magnoliophyta|Rep: F12A... 52 9e-06
UniRef50_Q2UJI0 Cluster: Signal recognition particle; n=8; Eurot... 51 1e-05
UniRef50_A7AWU7 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A7QBT9 Cluster: Chromosome chr1 scaffold_75, whole geno... 48 8e-05
UniRef50_P49965 Cluster: Signal recognition particle 72 kDa prot... 46 4e-04
UniRef50_A0C377 Cluster: Chromosome undetermined scaffold_146, w... 42 0.007
UniRef50_Q86ZG9 Cluster: Related to SIGNAL RECOGNITION PARTICLE ... 42 0.007
UniRef50_UPI00006CBC87 Cluster: conserved hypothetical protein; ... 41 0.012
UniRef50_A2E5L3 Cluster: Putative uncharacterized protein; n=1; ... 41 0.016
UniRef50_Q6H9R9 Cluster: Putative SRP72 protein; n=1; Yarrowia l... 41 0.016
UniRef50_A2QJF4 Cluster: Complex: in C. familiaris the 68-; n=1;... 41 0.016
UniRef50_Q54EP7 Cluster: Signal recognition particle 72 kDa subu... 40 0.037
UniRef50_Q6CWQ6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 39 0.065
UniRef50_A7TL27 Cluster: Putative uncharacterized protein; n=1; ... 39 0.065
UniRef50_UPI000023E105 Cluster: hypothetical protein FG01900.1; ... 38 0.086
UniRef50_Q755C6 Cluster: AFL103Cp; n=1; Eremothecium gossypii|Re... 38 0.086
UniRef50_P38688 Cluster: Signal recognition particle subunit SRP... 38 0.15
UniRef50_Q0P4I1 Cluster: Uncharacterized protein KIAA1712 homolo... 36 0.35
UniRef50_Q6C6A2 Cluster: Similarities with DEHA0F01892g Debaryom... 35 0.80
UniRef50_A6SDD3 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_A6SAK5 Cluster: Predicted protein; n=2; Sclerotiniaceae... 34 1.8
UniRef50_Q6FV06 Cluster: Candida glabrata strain CBS138 chromoso... 33 2.4
UniRef50_Q5CNY3 Cluster: Signal recognition particle 72 kDa prot... 33 3.2
UniRef50_A5K524 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_A7EUC4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_Q67K78 Cluster: Putative sugar kinase; n=1; Symbiobacte... 32 7.4
UniRef50_A6S461 Cluster: Putative uncharacterized protein; n=2; ... 32 7.4
UniRef50_Q10CE8 Cluster: TCP family transcription factor contain... 31 9.8
UniRef50_Q0UL08 Cluster: Predicted protein; n=1; Phaeosphaeria n... 31 9.8
UniRef50_A1CIF3 Cluster: BRCT domain protein; n=13; Eurotiomycet... 31 9.8
>UniRef50_Q5BHY9 Cluster: GH10846p; n=7; Endopterygota|Rep: GH10846p
- Drosophila melanogaster (Fruit fly)
Length = 650
Score = 119 bits (287), Expect = 3e-26
Identities = 63/122 (51%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXX 292
RA + +LP L+ L T +IDALE++ W+M AK KKT +K E SP TP L +
Sbjct: 492 RALELSRKLPKLETLTTASEIDALEAANWVMSAKAAKKTANTKVEPSPSTP---LEKKKN 548
Query: 291 XXXXXXXKLPPNADLSKPPDPERWLPKYERTAYRKRRGIRR--DVIKGSQGMSTTATDQY 118
KLP N + PDPERWLPKYERT +RK+RG R DVIKGSQGM++ A DQY
Sbjct: 549 RNRKRKGKLPKNYNAEVAPDPERWLPKYERTGFRKKRGGARGKDVIKGSQGMASGAADQY 608
Query: 117 DM 112
DM
Sbjct: 609 DM 610
>UniRef50_UPI0000D56F31 Cluster: PREDICTED: similar to CG5434-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5434-PA - Tribolium castaneum
Length = 653
Score = 99.5 bits (237), Expect = 3e-20
Identities = 62/159 (38%), Positives = 84/159 (52%), Gaps = 2/159 (1%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELG-QXX 295
RA ++QLP ++ L D++ L+ S A +KK+ +KQ+ PGTP E G +
Sbjct: 496 RAVELSKQLPSIESLSENIDVETLQLST--PSAFNLKKSPAAKQDSQPGTPKSEGGVEKK 553
Query: 294 XXXXXXXXKLPPNADLSKPPDPERWLPKYERTAYRKRRGIR-RDVIKGSQGMSTTATDQY 118
KLP N + + PPDPERWLPKYERT +RK+R R +DVIKGSQG ++ +QY
Sbjct: 554 KKHRKRKGKLPKNYNANIPPDPERWLPKYERTGFRKKRDRRAKDVIKGSQGTASGQAEQY 613
Query: 117 DMXXXXXXXXXXXXXXXPRVEVKQTESAWQRKQQQKKKG 1
D P + Q+K QQKKKG
Sbjct: 614 DFSSKVTEQEAESPTVEPSPRARAQHP--QKKGQQKKKG 650
>UniRef50_UPI0000DB784B Cluster: PREDICTED: similar to CG5434-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG5434-PA
- Apis mellifera
Length = 629
Score = 68.9 bits (161), Expect(2) = 2e-13
Identities = 38/90 (42%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYRKRRGIR-RD-VIKGSQGMSTTATDQYDMXXXXXX 94
LP N D + PPDPERWLP++ER+ +RK+R R RD +KG+QG +T A+D YD+
Sbjct: 534 LPKNYDPNVPPDPERWLPRHERSGFRKKRDRRNRDAAMKGTQGAATGASDMYDITKMPTN 593
Query: 93 XXXXXXXXXPRVEVKQTESAWQRKQQQKKK 4
QRK QQKKK
Sbjct: 594 AKPSPNPRHSPAVESSGPRQQQRKVQQKKK 623
Score = 28.3 bits (60), Expect(2) = 2e-13
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSK 388
+A +++LPPL L DIDALE+ K
Sbjct: 496 KAQLLSKRLPPLHDLYETTDIDALETQK 523
>UniRef50_Q60VE1 Cluster: Putative uncharacterized protein CBG19592;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG19592 - Caenorhabditis
briggsae
Length = 634
Score = 64.5 bits (150), Expect = 1e-09
Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFEL--GQX 298
+A + + +L P + +E ++D LE S W++ + K Q K+ +SP P E+ +
Sbjct: 480 KAEALSSKLFP-ESMEVDVNVDELEESDWILYGE---KYRQKKEAKSPAAPDAEIITRKL 535
Query: 297 XXXXXXXXXKLPPNADLSKPPDPERWLPKYERTAYRKRRGIR-RDVIKGSQGMST 136
+LP N + PDPERWLP+ ER+ Y+K+R R R++ +G+QG S+
Sbjct: 536 KNTNRKRKIRLPKNYNPDVAPDPERWLPRQERSTYKKKRKNREREIGRGTQGSSS 590
>UniRef50_O76094 Cluster: Signal recognition particle 72 kDa
protein; n=45; Euteleostomi|Rep: Signal recognition
particle 72 kDa protein - Homo sapiens (Human)
Length = 671
Score = 63.3 bits (147), Expect = 3e-09
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 3/122 (2%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVV-KKTVQSKQEQSPGTPGFELGQXX 295
+A + ++ LP D + K D++ALE+S GA + KK + + P G G
Sbjct: 498 KAKALSKHLPSSDSMSLKVDVEALENSA---GATYIRKKGGKVTGDSQPKEQG--QGDLK 552
Query: 294 XXXXXXXXKLPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVI-KGSQGMSTTATDQ 121
KLP N D PDPERWLP ER+ YR +++G ++D I KG+QG + A+ +
Sbjct: 553 KKKKKKKGKLPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGKGTQGATAGASSE 612
Query: 120 YD 115
D
Sbjct: 613 LD 614
>UniRef50_P91240 Cluster: Signal recognition particle 72 kDa protein
homolog; n=1; Caenorhabditis elegans|Rep: Signal
recognition particle 72 kDa protein homolog -
Caenorhabditis elegans
Length = 694
Score = 60.5 bits (140), Expect = 2e-08
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXX 292
+A S + +L P + +E ++D LE S W++ + K Q K+ +SP T +
Sbjct: 539 KAESLSAKLFP-ETMEVDVNVDELEDSDWILYGE---KYRQKKEAKSPQTAEIAATRKLK 594
Query: 291 XXXXXXXK--LPPNADLSKPPDPERWLPKYERTAY-RKRRGIRRDVIKGSQGMST 136
K LP N + + PDPERWLP+ ER+ Y RKR+ R++ +G+QG S+
Sbjct: 595 IATKRKRKIRLPKNYNSAVTPDPERWLPRQERSTYKRKRKNREREIGRGTQGSSS 649
>UniRef50_A7RLD9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 651
Score = 59.7 bits (138), Expect = 3e-08
Identities = 38/114 (33%), Positives = 60/114 (52%)
Frame = -3
Query: 468 AXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXXX 289
A +E+LPPL+ ++ D+DALE+S+ G + +Q P G +
Sbjct: 494 AEKYSERLPPLEG-DSAMDVDALETSQLTCGPRF------GRQRGRPDEDGAV--ELKRK 544
Query: 288 XXXXXXKLPPNADLSKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQGMSTTAT 127
KLP N + PDPERWLPK ER+ Y+ +R + +V KG+QG ++ ++
Sbjct: 545 RKRKKGKLPKNCNTEVDPDPERWLPKRERSYYKGKRQKKTNVGKGTQGTASASS 598
>UniRef50_Q9FXD4 Cluster: F12A21.17; n=6; Magnoliophyta|Rep:
F12A21.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 664
Score = 51.6 bits (118), Expect = 9e-06
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXX 292
+A S +QL PL L+ D+D LE + GAK ++ S ++ + +
Sbjct: 522 KAESYEKQLKPLPGLKA-VDVDKLEKT---YGAKPIEGAAASSSQEEVKKE--KAKRKRK 575
Query: 291 XXXXXXXKLPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVIKGSQGMST 136
P A+ PPDPERWLP+ ER++Y+ KR+ R I+GSQG T
Sbjct: 576 RKPKYPKGFDP-ANPGPPPDPERWLPRRERSSYKPKRKDKRAAQIRGSQGAVT 627
>UniRef50_Q2UJI0 Cluster: Signal recognition particle; n=8;
Eurotiomycetidae|Rep: Signal recognition particle -
Aspergillus oryzae
Length = 648
Score = 51.2 bits (117), Expect = 1e-05
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = -3
Query: 462 SXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXXXXX 283
S + LPP+D L + D++ALES+ + + T G + G+
Sbjct: 510 SQVDTLPPIDDLISDVDVNALESAGISPPSSAAAAAAAAIAGARKRTSGDKQGRATKRVR 569
Query: 282 XXXXKLPPNADLSKPPDPERWLPKYERTAYRK--RRGIRR 169
LP + D SK PDPERWLP +R+ YR R+G +R
Sbjct: 570 KSR--LPKDYDASKTPDPERWLPLRDRSNYRPKGRKGKQR 607
>UniRef50_A7AWU7 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 713
Score = 50.8 bits (116), Expect = 2e-05
Identities = 20/36 (55%), Positives = 31/36 (86%), Gaps = 1/36 (2%)
Frame = -3
Query: 240 PPDPERWLPKYERTAYRKRRGIRRDVIKG-SQGMST 136
PPDPERWLPKYER+A++K+ +++++KG SQG ++
Sbjct: 651 PPDPERWLPKYERSAFKKQLKRKKEMVKGHSQGATS 686
>UniRef50_A7QBT9 Cluster: Chromosome chr1 scaffold_75, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_75, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 673
Score = 48.4 bits (110), Expect = 8e-05
Identities = 22/38 (57%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = -3
Query: 255 ADLSKPPDPERWLPKYERTAYR-KRRGIRRDVIKGSQG 145
A+ PPDPERWLPK ER++YR KR+ R ++GSQG
Sbjct: 582 ANPGPPPDPERWLPKRERSSYRPKRKDKRAAQVRGSQG 619
>UniRef50_P49965 Cluster: Signal recognition particle 72 kDa
protein; n=3; Schistosoma|Rep: Signal recognition
particle 72 kDa protein - Schistosoma mansoni (Blood
fluke)
Length = 707
Score = 46.0 bits (104), Expect = 4e-04
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVIKGSQGMSTTATDQYDMXXXXXXX 91
LP N PDP RWLP+ ERT YR KRR R +G QG T ++D
Sbjct: 618 LPKNYQPGVMPDPNRWLPRRERTHYRGKRRDKRFAPTRGPQG-QITGESEWDAAIRSPKV 676
Query: 90 XXXXXXXXPRVEVKQTESAWQRKQQQKKKG 1
+ + +A Q++++ +KKG
Sbjct: 677 KIPEDGSAGSTPKQMSNTAKQQQKKGRKKG 706
>UniRef50_A0C377 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 551
Score = 41.9 bits (94), Expect = 0.007
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -3
Query: 264 PPNADLSKP---PDPERWLPKYERTAYRKRRGIRRDVIKGSQGMSTTAT 127
P N D + P P+PERWLPK+ER ++K++ I G+ G T T
Sbjct: 480 PKNFDKTNPGPLPNPERWLPKHERKEWKKKKQIHSRTQGGNAGNETVNT 528
>UniRef50_Q86ZG9 Cluster: Related to SIGNAL RECOGNITION PARTICLE 72
kDa PROTEIN; n=3; Sordariomycetes|Rep: Related to SIGNAL
RECOGNITION PARTICLE 72 kDa PROTEIN - Neurospora crassa
Length = 682
Score = 41.9 bits (94), Expect = 0.007
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYRK--RRGIRR 169
LP N D +K PDPERWLP +R++YR R+G +R
Sbjct: 594 LPKNYDPAKQPDPERWLPLRDRSSYRPKGRKGKKR 628
>UniRef50_UPI00006CBC87 Cluster: conserved hypothetical protein;
n=1; Tetrahymena thermophila SB210|Rep: conserved
hypothetical protein - Tetrahymena thermophila SB210
Length = 644
Score = 41.1 bits (92), Expect = 0.012
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -3
Query: 342 QEQSPGTPGFELGQXXXXXXXXXXKLPPNADLSKP---PDPERWLPKYERTAYRKRRGIR 172
Q +S TP + + + P D P P+PERWLPK+ER ++K++G
Sbjct: 541 QTKSSTTPATHVAKKITKPKKKRVRYPKGFDPKNPGPLPNPERWLPKWERKDFKKKKGAA 600
Query: 171 RDVIKGSQGMSTTATD 124
+ +QG S A D
Sbjct: 601 LN--SRTQGSSAAAQD 614
>UniRef50_A2E5L3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 590
Score = 40.7 bits (91), Expect = 0.016
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYRKRRGIRRDVIK 157
LP N D ++ PDPERW+ K +R A R RR + V K
Sbjct: 527 LPRNYDPNRKPDPERWIRKSQRAANRNRRKAKAPVAK 563
>UniRef50_Q6H9R9 Cluster: Putative SRP72 protein; n=1; Yarrowia
lipolytica|Rep: Putative SRP72 protein - Yarrowia
lipolytica (Candida lipolytica)
Length = 602
Score = 40.7 bits (91), Expect = 0.016
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQG 145
+P NAD + PDPERWL K +R+ Y+ ++ ++ ++ +QG
Sbjct: 530 IPANADPAVTPDPERWLAKRDRSTYKPKK-VKGKKVQNTQG 569
>UniRef50_A2QJF4 Cluster: Complex: in C. familiaris the 68-; n=1;
Aspergillus niger|Rep: Complex: in C. familiaris the 68-
- Aspergillus niger
Length = 628
Score = 40.7 bits (91), Expect = 0.016
Identities = 19/35 (54%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYRK--RRGIRR 169
LP + D SK PDPERWLP +R++YR R+G +R
Sbjct: 552 LPKDYDPSKTPDPERWLPLRDRSSYRPKGRKGKQR 586
>UniRef50_Q54EP7 Cluster: Signal recognition particle 72 kDa
subunit; n=1; Dictyostelium discoideum AX4|Rep: Signal
recognition particle 72 kDa subunit - Dictyostelium
discoideum AX4
Length = 672
Score = 39.5 bits (88), Expect = 0.037
Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -3
Query: 237 PDPERWLPKYERTAYRKRRGIR-RDVIKGSQGMSTTA 130
PDP RWLPK++R + R + +D+IKG QG+++ +
Sbjct: 598 PDPGRWLPKWQRANAKAARSKKNKDIIKGPQGIASAS 634
>UniRef50_Q6CWQ6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 638
Score = 38.7 bits (86), Expect = 0.065
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYR 190
LP N D SK DPERWLP ER+ YR
Sbjct: 563 LPKNFDESKKLDPERWLPLKERSTYR 588
>UniRef50_A7TL27 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 644
Score = 38.7 bits (86), Expect = 0.065
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = -3
Query: 258 NADLSKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQG 145
N D SK PDPERWL +R+ YR + ++ + K +QG
Sbjct: 574 NRDASKTPDPERWLALIDRSTYRPKN--KKQLAKQTQG 609
>UniRef50_UPI000023E105 Cluster: hypothetical protein FG01900.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01900.1 - Gibberella zeae PH-1
Length = 643
Score = 38.3 bits (85), Expect = 0.086
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXX 292
R + LPP+D L D+ +L S+ + A + + S G G
Sbjct: 508 RVEKHLQNLPPVDSLIEGIDVASLLSAGVAVSASKPGSSTLKRAAPS-GNEG------KS 560
Query: 291 XXXXXXXKLPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVIKGSQG 145
+LP N PDPERWLP +R++YR K + ++ I +QG
Sbjct: 561 QKRRRKIRLPKNYVEGTKPDPERWLPLRDRSSYRPKGKKGKKKAIDSTQG 610
>UniRef50_Q755C6 Cluster: AFL103Cp; n=1; Eremothecium gossypii|Rep:
AFL103Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 614
Score = 38.3 bits (85), Expect = 0.086
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYRKRR 181
LP D K PDPERWLP +R++YR ++
Sbjct: 550 LPKAFDPEKQPDPERWLPLRDRSSYRPKK 578
>UniRef50_P38688 Cluster: Signal recognition particle subunit SRP72;
n=2; Saccharomyces cerevisiae|Rep: Signal recognition
particle subunit SRP72 - Saccharomyces cerevisiae
(Baker's yeast)
Length = 640
Score = 37.5 bits (83), Expect = 0.15
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = -3
Query: 252 DLSKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQG 145
D SK PDPERWLP +R+ YR ++ ++ K +QG
Sbjct: 574 DTSKLPDPERWLPLRDRSTYRPKK--KQQGAKQTQG 607
>UniRef50_Q0P4I1 Cluster: Uncharacterized protein KIAA1712 homolog;
n=3; Tetrapoda|Rep: Uncharacterized protein KIAA1712
homolog - Xenopus tropicalis (Western clawed frog)
(Silurana tropicalis)
Length = 385
Score = 36.3 bits (80), Expect = 0.35
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = -1
Query: 434 TSLRRKXIL--TPWNRRNG*WELKSSRRLFKASRNNLPELPXLSWDRRRKRNASATANSR 261
TS++ K I+ T WN G L + RL ++ +++LPE +S R R A+ ++
Sbjct: 257 TSVKGKIIIDETDWNNLLGRVLLLETERLLQSKKSDLPEFARISEHRTSSRMANEICSNL 316
Query: 260 RTQTS-PNLPIRKGGCQSTSELRTESDEALDVTSSRVAKE 144
+T+ P + G S T S A+D+ S + +E
Sbjct: 317 KTKADIPESHHQSSGYSSVLSADT-SPIAIDINYSSLTEE 355
>UniRef50_Q6C6A2 Cluster: Similarities with DEHA0F01892g
Debaryomyces hansenii; n=1; Yarrowia lipolytica|Rep:
Similarities with DEHA0F01892g Debaryomyces hansenii -
Yarrowia lipolytica (Candida lipolytica)
Length = 494
Score = 35.1 bits (77), Expect = 0.80
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 287 NASATANSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSSRVAKECPPLP 129
N+S T + RR +PNLPI G S+S + + + S A PP P
Sbjct: 373 NSSPTRSPRRQYNTPNLPITNSGTSSSSNRLKKKASTMSLGSGCGAPHIPPPP 425
>UniRef50_A6SDD3 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 651
Score = 34.7 bits (76), Expect = 1.1
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYR-KRRGIRRDVIKGSQG 145
LP + + K DPERWLP +R++YR K + ++ + +QG
Sbjct: 577 LPKDFEEGKKMDPERWLPLKDRSSYRPKGKKGKKKALDATQG 618
>UniRef50_A6SAK5 Cluster: Predicted protein; n=2; Sclerotiniaceae|Rep:
Predicted protein - Botryotinia fuckeliana B05.10
Length = 1066
Score = 33.9 bits (74), Expect = 1.8
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -1
Query: 374 LKSSRRLFKASRNNLPELPXLSWDRR---RKRNASATANSRRTQTSPNLPIRKGGCQSTS 204
+++S+ S N E P S DRR R+R S ++ R ++ + RKG S
Sbjct: 886 IRNSKADQSTSTVNTYEQPNPSSDRRYRRRRRRNSDPSSDRPSRPRKHRKHRKGRHSDES 945
Query: 203 ELRTESDEALDVTSSRVAKECPPLPR 126
+ DE ++V +R KE PL R
Sbjct: 946 DSEKSEDEEVEVLPARFDKEGRPLSR 971
>UniRef50_Q6FV06 Cluster: Candida glabrata strain CBS138 chromosome
E complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome E complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 647
Score = 33.5 bits (73), Expect = 2.4
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -3
Query: 249 LSKPPDPERWLPKYERTAYR 190
+ K PDPERWLP +R++YR
Sbjct: 579 VKKNPDPERWLPLKDRSSYR 598
>UniRef50_Q5CNY3 Cluster: Signal recognition particle 72 kDa
protein; n=2; Cryptosporidium|Rep: Signal recognition
particle 72 kDa protein - Cryptosporidium hominis
Length = 680
Score = 33.1 bits (72), Expect = 3.2
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = -3
Query: 237 PDPERWLPKYERTAYRK 187
PDPERWLPK +R +++K
Sbjct: 608 PDPERWLPKEQRLSFKK 624
>UniRef50_A5K524 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 856
Score = 33.1 bits (72), Expect = 3.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = -3
Query: 234 DPERWLPKYERTAYRKRR 181
DPE+WLPK+E+T ++K +
Sbjct: 799 DPEKWLPKHEKTGFKKSK 816
>UniRef50_A7EUC4 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 654
Score = 33.1 bits (72), Expect = 3.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 267 LPPNADLSKPPDPERWLPKYERTAYRKR 184
LP + + K DPERWLP +R++YR +
Sbjct: 578 LPRDFEEGKKMDPERWLPLKDRSSYRPK 605
>UniRef50_Q67K78 Cluster: Putative sugar kinase; n=1;
Symbiobacterium thermophilum|Rep: Putative sugar kinase
- Symbiobacterium thermophilum
Length = 520
Score = 31.9 bits (69), Expect = 7.4
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -3
Query: 252 DLSKPPDPERWLPKYERTAYRKRRGIRRDVIKGSQGM 142
+L++P + WLP Y R A++ RG R V GS GM
Sbjct: 221 ELTRPAMVKSWLPTYSRDAHKGTRG-RVYVAAGSHGM 256
>UniRef50_A6S461 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 472
Score = 31.9 bits (69), Expect = 7.4
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -1
Query: 332 LPELPXLSWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSSRV 153
+P P + +R++R S + N++R T L +RK Q +E DE + V+S R
Sbjct: 56 VPSPPPEAGKKRKEREISGSRNTKRNTT---LTLRKSPSQQPLTSDSEEDEEIAVSSKRA 112
Query: 152 AKE 144
E
Sbjct: 113 KPE 115
>UniRef50_Q10CE8 Cluster: TCP family transcription factor containing
protein, expressed; n=5; Oryza sativa|Rep: TCP family
transcription factor containing protein, expressed -
Oryza sativa subsp. japonica (Rice)
Length = 357
Score = 31.5 bits (68), Expect = 9.8
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = -1
Query: 338 NNLPELPXLSWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSS 159
+ LP L ++ A A RR+Q K GC STSE SD+ + V S+
Sbjct: 108 DTLPSLDPAAFAAIPHAAADAAPTRRRSQQQQQQLSNKSGCSSTSETSKGSDKEVTVASA 167
>UniRef50_Q0UL08 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 299
Score = 31.5 bits (68), Expect = 9.8
Identities = 22/64 (34%), Positives = 29/64 (45%)
Frame = -1
Query: 368 SSRRLFKASRNNLPELPXLSWDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELRTE 189
SSR P P +S R KR + + S+ QT+P P+RK G +L TE
Sbjct: 139 SSRTPSLCGDGQQPGSPSMS-PRLIKRESPFSPVSQEEQTTPKRPLRKRGRPRLDQLDTE 197
Query: 188 SDEA 177
S A
Sbjct: 198 SQSA 201
>UniRef50_A1CIF3 Cluster: BRCT domain protein; n=13;
Eurotiomycetidae|Rep: BRCT domain protein - Aspergillus
clavatus
Length = 867
Score = 31.5 bits (68), Expect = 9.8
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -1
Query: 368 SSRRLFKASRNNLPEL-PXLS-WDRRRKRNASATANSRRTQTSPNLPIRKGGCQSTSELR 195
SSR+ +A+ + L EL P ++ +++ +KR RR + + + + E +
Sbjct: 543 SSRKSKEAAFSRLQELAPDIALYEKEKKRVGGVVYGGRRKSDEDRVALTNTKKRRSMEPQ 602
Query: 194 TESDEALDVTSSRVAKECPPL 132
ESDE + + R K PP+
Sbjct: 603 EESDEEIATDAKRQKKSKPPI 623
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 404,951,888
Number of Sequences: 1657284
Number of extensions: 7146234
Number of successful extensions: 22198
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 21565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22180
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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