Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15m16
(473 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021435-1|AAX33583.1| 650|Drosophila melanogaster GH10846p pro... 119 2e-27
AY060452-1|AAL25491.1| 208|Drosophila melanogaster LP10092p pro... 119 2e-27
AE014297-2824|AAF55784.1| 650|Drosophila melanogaster CG5434-PA... 119 2e-27
BT025133-1|ABE73304.1| 188|Drosophila melanogaster IP07148p pro... 31 1.1
AE014297-4589|AAF57042.1| 188|Drosophila melanogaster CG15536-P... 31 1.1
BT024192-1|ABC86254.1| 786|Drosophila melanogaster RE74757p pro... 28 7.4
AL133504-2|CAB65844.1| 819|Drosophila melanogaster EG:BACH7M4.2... 28 7.4
AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA... 28 7.4
>BT021435-1|AAX33583.1| 650|Drosophila melanogaster GH10846p
protein.
Length = 650
Score = 119 bits (287), Expect = 2e-27
Identities = 63/122 (51%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXX 292
RA + +LP L+ L T +IDALE++ W+M AK KKT +K E SP TP L +
Sbjct: 492 RALELSRKLPKLETLTTASEIDALEAANWVMSAKAAKKTANTKVEPSPSTP---LEKKKN 548
Query: 291 XXXXXXXKLPPNADLSKPPDPERWLPKYERTAYRKRRGIRR--DVIKGSQGMSTTATDQY 118
KLP N + PDPERWLPKYERT +RK+RG R DVIKGSQGM++ A DQY
Sbjct: 549 RNRKRKGKLPKNYNAEVAPDPERWLPKYERTGFRKKRGGARGKDVIKGSQGMASGAADQY 608
Query: 117 DM 112
DM
Sbjct: 609 DM 610
>AY060452-1|AAL25491.1| 208|Drosophila melanogaster LP10092p
protein.
Length = 208
Score = 119 bits (287), Expect = 2e-27
Identities = 63/122 (51%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXX 292
RA + +LP L+ L T +IDALE++ W+M AK KKT +K E SP TP L +
Sbjct: 50 RALELSRKLPKLETLTTASEIDALEAANWVMSAKAAKKTANTKVEPSPSTP---LEKKKN 106
Query: 291 XXXXXXXKLPPNADLSKPPDPERWLPKYERTAYRKRRGIRR--DVIKGSQGMSTTATDQY 118
KLP N + PDPERWLPKYERT +RK+RG R DVIKGSQGM++ A DQY
Sbjct: 107 RNRKRKGKLPKNYNAEVAPDPERWLPKYERTGFRKKRGGARGKDVIKGSQGMASGAADQY 166
Query: 117 DM 112
DM
Sbjct: 167 DM 168
>AE014297-2824|AAF55784.1| 650|Drosophila melanogaster CG5434-PA
protein.
Length = 650
Score = 119 bits (287), Expect = 2e-27
Identities = 63/122 (51%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Frame = -3
Query: 471 RAXSXAEQLPPLDQLETKXDIDALESSKWMMGAKVVKKTVQSKQEQSPGTPGFELGQXXX 292
RA + +LP L+ L T +IDALE++ W+M AK KKT +K E SP TP L +
Sbjct: 492 RALELSRKLPKLETLTTASEIDALEAANWVMSAKAAKKTANTKVEPSPSTP---LEKKKN 548
Query: 291 XXXXXXXKLPPNADLSKPPDPERWLPKYERTAYRKRRGIRR--DVIKGSQGMSTTATDQY 118
KLP N + PDPERWLPKYERT +RK+RG R DVIKGSQGM++ A DQY
Sbjct: 549 RNRKRKGKLPKNYNAEVAPDPERWLPKYERTGFRKKRGGARGKDVIKGSQGMASGAADQY 608
Query: 117 DM 112
DM
Sbjct: 609 DM 610
>BT025133-1|ABE73304.1| 188|Drosophila melanogaster IP07148p
protein.
Length = 188
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -1
Query: 269 NSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 114
N+ ++ P L + + GCQST +R + D++ T +E P P ++++
Sbjct: 7 NTPQSGRRPRLGLSRRGCQSTPLIRLQRDDSAANTPKCSEQETPRAPPLSLS 58
>AE014297-4589|AAF57042.1| 188|Drosophila melanogaster CG15536-PA
protein.
Length = 188
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = -1
Query: 269 NSRRTQTSPNLPIRKGGCQSTSELRTESDEALDVTSSRVAKECPPLPRINMT 114
N+ ++ P L + + GCQST +R + D++ T +E P P ++++
Sbjct: 7 NTPQSGRRPRLGLSRRGCQSTPLIRLQRDDSAANTPKCSEQETPRAPPLSLS 58
>BT024192-1|ABC86254.1| 786|Drosophila melanogaster RE74757p
protein.
Length = 786
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 305 DRRRKRNASATANSRRTQTSPNLPIRKG-GCQSTSELRTESDEALDVTSSRVAKECPPLP 129
D+ ++++ S + +P P+ G G S S +DE + ++ + KE P LP
Sbjct: 445 DQDKQQDDSPAEMAAAVTVTPQKPVATGSGSGSNSAAMALNDEVISISIDSMGKEDPLLP 504
Query: 128 R 126
+
Sbjct: 505 Q 505
>AL133504-2|CAB65844.1| 819|Drosophila melanogaster EG:BACH7M4.2
protein.
Length = 819
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 305 DRRRKRNASATANSRRTQTSPNLPIRKG-GCQSTSELRTESDEALDVTSSRVAKECPPLP 129
D+ ++++ S + +P P+ G G S S +DE + ++ + KE P LP
Sbjct: 478 DQDKQQDDSPAEMAAAVTVTPQKPVATGSGSGSNSAAMALNDEVISISIDSMGKEDPLLP 537
Query: 128 R 126
+
Sbjct: 538 Q 538
>AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA
protein.
Length = 1529
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 305 DRRRKRNASATANSRRTQTSPNLPIRKG-GCQSTSELRTESDEALDVTSSRVAKECPPLP 129
D+ ++++ S + +P P+ G G S S +DE + ++ + KE P LP
Sbjct: 481 DQDKQQDDSPAEMAAAVTVTPQKPVATGSGSGSNSAAMALNDEVISISIDSMGKEDPLLP 540
Query: 128 R 126
+
Sbjct: 541 Q 541
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,620,236
Number of Sequences: 53049
Number of extensions: 356622
Number of successful extensions: 1142
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1136
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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