Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15m13
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021241-1|AAX33389.1|  780|Drosophila melanogaster RE67575p pro...    29   7.3  
BT015277-1|AAT94506.1|  742|Drosophila melanogaster LD16684p pro...    29   7.3  
AE014297-4347|AAF56870.1| 1302|Drosophila melanogaster CG11898-P...    29   7.3  
AY052087-1|AAK93511.1|  428|Drosophila melanogaster SD03870p pro...    28   9.7  
AE014134-2964|AAF53694.1|  428|Drosophila melanogaster CG10376-P...    28   9.7  

>BT021241-1|AAX33389.1|  780|Drosophila melanogaster RE67575p
           protein.
          Length = 780

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 300 LSILTSRYTEPIMDKRANSRKPFLFYNEDYYCEKPKRYFHTNKVIFEKLDPYATN 464
           LSI  + + + I+ K A      +FYN+  +C K  R     K I E L P   N
Sbjct: 140 LSITENYFEKMILSKNAKKVHVVMFYND--WCFKCTRIVDAFKKILELLQPIGIN 192


>BT015277-1|AAT94506.1|  742|Drosophila melanogaster LD16684p
           protein.
          Length = 742

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = +3

Query: 300 LSILTSRYTEPIMDKRANSRKPFLFYNEDYYCEKPKRYFHTNKVIFEKLDPYATN 464
           LSI  + + + I+ K A      +FYN+  +C K  R     K I E L P   N
Sbjct: 102 LSITENYFEKMILSKNAKKVHVVMFYND--WCFKCTRIVDAFKKILELLQPIGIN 154


>AE014297-4347|AAF56870.1| 1302|Drosophila melanogaster CG11898-PA
           protein.
          Length = 1302

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = -1

Query: 497 KIRKQFSASINIRCVRIEFFKNYF-VCMKITFGLLTIIIFVVEQKGFARIGTFVHDW 330
           +I +QF     I  V+++ +K YF V       +L +++FVV +   A +  F+  W
Sbjct: 683 EIEQQFKEQQQIGSVKLQTYKEYFKVLGHPLVVVLILLMFVVARSSEATMDIFLSKW 739


>AY052087-1|AAK93511.1|  428|Drosophila melanogaster SD03870p
           protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 616 SDTAVNADDVPVCLITGSKRRNSSANL 536
           +DT +  DD+P  LI  +K R+S  N+
Sbjct: 386 ADTTMKLDDIPKLLIEAAKERDSQDNI 412


>AE014134-2964|AAF53694.1|  428|Drosophila melanogaster CG10376-PA
           protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 9.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 616 SDTAVNADDVPVCLITGSKRRNSSANL 536
           +DT +  DD+P  LI  +K R+S  N+
Sbjct: 386 ADTTMKLDDIPKLLIEAAKERDSQDNI 412


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,751,438
Number of Sequences: 53049
Number of extensions: 643019
Number of successful extensions: 1695
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)