Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15m12
(712 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-2370|AAF57935.1| 394|Drosophila melanogaster CG6472-PA... 29 6.2
BT001476-1|AAN71231.1| 607|Drosophila melanogaster LD19244p pro... 29 8.2
AY035206-1|AAK59373.1| 1235|Drosophila melanogaster protein phos... 29 8.2
AF145609-1|AAD38584.1| 974|Drosophila melanogaster BcDNA.GH0283... 29 8.2
AF011791-1|AAB69991.2| 1107|Drosophila melanogaster Bifocal prot... 29 8.2
AE014298-2568|AAO41693.1| 975|Drosophila melanogaster CG8611-PB... 29 8.2
AE014298-2567|AAF48727.2| 974|Drosophila melanogaster CG8611-PA... 29 8.2
AE014298-1662|AAF48076.1| 1108|Drosophila melanogaster CG1822-PC... 29 8.2
AE014298-1661|AAN09639.1| 1235|Drosophila melanogaster CG1822-PB... 29 8.2
AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA... 29 8.2
>AE013599-2370|AAF57935.1| 394|Drosophila melanogaster CG6472-PA
protein.
Length = 394
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 374 PSKRCAPQQMFLLCRTTGRVPFF 306
P++RC P MF +CR G P F
Sbjct: 287 PAQRCEPSDMFGICREPGGGPAF 309
>BT001476-1|AAN71231.1| 607|Drosophila melanogaster LD19244p
protein.
Length = 607
Score = 28.7 bits (61), Expect = 8.2
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = -2
Query: 525 THGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTAD 346
T V NK KS G + + E V P K+S K +Q A + TT D
Sbjct: 463 TEDEVGNKEDGEKDKQKSKSSGSSPSSSEDEV--PLKRSNKFKQPPAKKKARKL--TTLD 518
Query: 345 VSSLQNHGESAVFQ 304
VSS ++HG F+
Sbjct: 519 VSSEEDHGSDEDFK 532
>AY035206-1|AAK59373.1| 1235|Drosophila melanogaster protein
phosphatase 1-bindingprotein Bifocal protein.
Length = 1235
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = -2
Query: 168 NTDYKLKLECARITSDLLYKNKNEVAINR------PKISSFKLQLNDVILDTIE 25
+TDY C D+ ++N N V + PK SSF++Q ND + T E
Sbjct: 952 DTDYDDYSMCPPSPCDVEFENANIVIDGKSSIRQKPKESSFRVQFNDTLTSTFE 1005
>AF145609-1|AAD38584.1| 974|Drosophila melanogaster BcDNA.GH02833
protein.
Length = 974
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -2
Query: 540 RYQKYTHGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTL 361
R ++ G D + S ++ SGG + ++ K KKS ++ ++ T
Sbjct: 195 RQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEESATS 254
Query: 360 RTTADVSSLQNHGE 319
D SS Q+ G+
Sbjct: 255 DEEPDESSAQSPGQ 268
>AF011791-1|AAB69991.2| 1107|Drosophila melanogaster Bifocal protein.
Length = 1107
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = -2
Query: 168 NTDYKLKLECARITSDLLYKNKNEVAINR------PKISSFKLQLNDVILDTIE 25
+TDY C D+ ++N N V + PK SSF++Q ND + T E
Sbjct: 951 DTDYDDYSMCPPSPCDVEFENANIVIDGKSSIRQKPKESSFRVQFNDTLTSTFE 1004
>AE014298-2568|AAO41693.1| 975|Drosophila melanogaster CG8611-PB,
isoform B protein.
Length = 975
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -2
Query: 540 RYQKYTHGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTL 361
R ++ G D + S ++ SGG + ++ K KKS ++ ++ T
Sbjct: 196 RQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEESATS 255
Query: 360 RTTADVSSLQNHGE 319
D SS Q+ G+
Sbjct: 256 DEEPDESSAQSPGQ 269
>AE014298-2567|AAF48727.2| 974|Drosophila melanogaster CG8611-PA,
isoform A protein.
Length = 974
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/74 (22%), Positives = 31/74 (41%)
Frame = -2
Query: 540 RYQKYTHGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTL 361
R ++ G D + S ++ SGG + ++ K KKS ++ ++ T
Sbjct: 195 RQKRREEGGGDQEASADEEDAKNNSGGGSPRVKPSSAVKESKKSSDIEDSGESGEESATS 254
Query: 360 RTTADVSSLQNHGE 319
D SS Q+ G+
Sbjct: 255 DEEPDESSAQSPGQ 268
>AE014298-1662|AAF48076.1| 1108|Drosophila melanogaster CG1822-PC,
isoform C protein.
Length = 1108
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = -2
Query: 168 NTDYKLKLECARITSDLLYKNKNEVAINR------PKISSFKLQLNDVILDTIE 25
+TDY C D+ ++N N V + PK SSF++Q ND + T E
Sbjct: 952 DTDYDDYSMCPPSPCDVEFENANIVIDGKSSIRQKPKESSFRVQFNDTLTSTFE 1005
>AE014298-1661|AAN09639.1| 1235|Drosophila melanogaster CG1822-PB,
isoform B protein.
Length = 1235
Score = 28.7 bits (61), Expect = 8.2
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Frame = -2
Query: 168 NTDYKLKLECARITSDLLYKNKNEVAINR------PKISSFKLQLNDVILDTIE 25
+TDY C D+ ++N N V + PK SSF++Q ND + T E
Sbjct: 952 DTDYDDYSMCPPSPCDVEFENANIVIDGKSSIRQKPKESSFRVQFNDTLTSTFE 1005
>AE014134-3368|AAF53983.2| 2759|Drosophila melanogaster CG8677-PA
protein.
Length = 2759
Score = 28.7 bits (61), Expect = 8.2
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = -2
Query: 525 THGNVDNKISMSDKTPTKKSGGHAMTLRERGVTKPPKKSEKLQQYKKAIAAEQTLRTTAD 346
T V NK KS G + + E V P K+S K +Q A + TT D
Sbjct: 1619 TEDEVGNKEDGEKDKQKSKSSGSSPSSSEDEV--PLKRSNKFKQPPAKKKARKL--TTLD 1674
Query: 345 VSSLQNHGESAVFQ 304
VSS ++HG F+
Sbjct: 1675 VSSEEDHGSDEDFK 1688
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,777,146
Number of Sequences: 53049
Number of extensions: 547930
Number of successful extensions: 1545
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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