Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15m05
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 32 0.34
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 32 0.34
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 31 0.79
AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of ... 30 1.4
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical ... 30 1.8
Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.4
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 29 2.4
AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of ... 29 2.4
AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of ... 29 2.4
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 3.2
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 3.2
S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein. 29 3.2
S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein. 29 3.2
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 29 3.2
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 29 3.2
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 7.3
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 28 7.3
U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 28 7.3
U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical pr... 28 7.3
AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical... 28 7.3
AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc ... 28 7.3
AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.3
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical pr... 27 9.7
U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical pr... 27 9.7
AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin rece... 27 9.7
AL132948-34|CAD31836.1| 248|Caenorhabditis elegans Hypothetical... 27 9.7
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 27 9.7
AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical ... 27 9.7
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 27 9.7
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 27 9.7
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 27 9.7
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = -3
Query: 436 NYILHSEGAS--FTCVNCNGVFNSIRSLLMHLVHAEHFAYRP-PAECTFRYYLELKHNIN 266
NY+ E + C +CN F + +L +H+ H RP E + + +L H
Sbjct: 496 NYVQQQENGKTRYACKDCNKTFGQLSNLKVHV--RTHTGERPFKCEICTKEFTQLAH--- 550
Query: 265 MLAKNKYVYYSFGRFKCGVCDADIEEGENAKRHV 164
L K+ V+ +C +CD N K H+
Sbjct: 551 -LQKHHLVHTGERPHRCDICDKRFSSTSNLKTHL 583
>Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical
protein Y6G8.3 protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.11
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = -3
Query: 634 VNNEVDKQFAALNKIEDLK----CVYCNFDFQDNREAVKHA--LSNVYHQSAVAETKLNA 473
+N + K+++ L + DL+ C C FQ N +H L H + + KLNA
Sbjct: 5 LNPVIRKEYSELKR-PDLRGKFICASCGQHFQHNASLNRHRRLLHGNEHTCMMCDRKLNA 63
Query: 472 NRADIISVYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMH 350
+ I +M+ + L FTC CN F+S R L H
Sbjct: 64 K--ETIRDHMRNEHNLFQV---FTCGCCNWSFSSKRQLSEH 99
>Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical
protein F46B6.7 protein.
Length = 614
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = -3
Query: 583 LKCVYCNFDFQDNREAVKHALSNVYHQSAVAETKLNANRADIISVYMKGNYILHSEGASF 404
L+C++C ++ + NR + H L ++H LN D ++ YI H +
Sbjct: 305 LQCIFCRYNARGNRSKIIHHLYMIHH--------LNLGSPD--NLVFVTEYIEHLKEKLH 354
Query: 403 --TCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTFRYYL 287
C+ C +F +L+ H+ H P ++Y+
Sbjct: 355 RNECIYCEKIFPDRNTLMDHMRKRNHREVNPKNHYYDKFYI 395
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 32.3 bits (70), Expect = 0.34
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -3
Query: 427 LHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRYYLELKHNINMLAKN 251
+H F C C F +L HL +H++ Y P C R+ H + + K+
Sbjct: 147 VHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPY-PCEYCGKRF-----HQKSDMKKH 200
Query: 250 KYVYYSFGRFKCGVCDADIEEGENAKRH 167
Y++ KC VC + N H
Sbjct: 201 TYIHTGEKPHKCTVCGKAFSQSSNLITH 228
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 32.3 bits (70), Expect = 0.34
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
Frame = -3
Query: 427 LHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPPAECTFRYYLELKHNINMLAKN 251
+H F C C F +L HL +H++ Y P C R+ H + + K+
Sbjct: 147 VHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPY-PCEYCGKRF-----HQKSDMKKH 200
Query: 250 KYVYYSFGRFKCGVCDADIEEGENAKRH 167
Y++ KC VC + N H
Sbjct: 201 TYIHTGEKPHKCTVCGKAFSQSSNLITH 228
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 31.1 bits (67), Expect = 0.79
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = -3
Query: 451 VYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPPAECTF--RYYLELK 278
VY + +H + F C NC F + S+ HL +H +P C + R + +L+
Sbjct: 185 VYQRHIQEVHGDARPFRCFNCGMRFANKTSMTHHL--KDHSLLKPMFSCDYCPRIFSKLE 242
Query: 277 HNINMLAKNKYVYYSFGRFKCGVCDADIEEGENAKRHVLSPKH 149
+K ++ F R C C E+A RH S H
Sbjct: 243 ------SKTRHHKMHFTRSTCQTC-MRFFTTEDALRHHQSTAH 278
>AC006833-10|AAU87800.1| 262|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform a protein.
Length = 262
Score = 30.3 bits (65), Expect = 1.4
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Frame = -3
Query: 580 KCVYCNFDFQDNREAVKHALSNVYHQSAVAETKLNANRADIISVYMKGNYILH-SEGASF 404
KC C+ F + +H V H R + MK + + H +G +F
Sbjct: 3 KCDICHQKFSNKTNLNRH---KVMHSGKKKFECQFCRRPFFRNDRMKEHMMTHIKKGNTF 59
Query: 403 TC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 305
C CN FNS SL H V +EH PA+C
Sbjct: 60 ECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 94
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 229 GRFKCGVCDADIEEGENAKRHVLSPKHRENMG 134
G F C VCD +++ N H+ H+ N+G
Sbjct: 88 GGFYCDVCDCVVKDSINFLDHINGKNHQRNIG 119
>AC006629-1|AAK18925.1| 330|Caenorhabditis elegans Hypothetical
protein F12E12.5 protein.
Length = 330
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = -3
Query: 580 KCVYCNFDFQDNREAVKHALSNVYHQSAVAET-KLNANRADIISVYMKGNYILHSEGASF 404
+C C F + +H +++ +S T + R D + ++ N++ E + F
Sbjct: 64 RCENCEKQFTNKPNLKRHQITHSGSKSKKCSTCQRTFFREDQLQRHLH-NHL--KERSHF 120
Query: 403 TC--VNCNGVFNSIRSLLMHLVHAEHFAYRPPAEC 305
C +NC+ F + HLV+ HF+Y A C
Sbjct: 121 DCPVLNCSMQFVFYEGVENHLVNHHHFSYSESAPC 155
>Z92786-1|CAB07203.1| 250|Caenorhabditis elegans Hypothetical
protein F47H4.1 protein.
Length = 250
Score = 29.5 bits (63), Expect = 2.4
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = -3
Query: 577 CVYCNFDFQDNREAVKHA--LSNVYHQSAVAETKLNANRADIISVYMKGNYILHSEGASF 404
C C+ +FQ + +H + + H + E LN + + I +M+ H+ F
Sbjct: 27 CSSCSQNFQHSASLNRHRQLMHSNEHTCMMCERALN--QKETIREHMRNE---HNLAQVF 81
Query: 403 TCVNCNGVFNSIRSLLMH 350
TC CN F S R L H
Sbjct: 82 TCGCCNWTFASKRQLTEH 99
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -3
Query: 412 ASFTCVNCNGVFNSIRSLLMH--LVHAE-HFA----YRPPAECTFRYYLELKHNINMLAK 254
A +C +C F S RSL H +H H ++ P T + ++E +HNI ++
Sbjct: 307 ARLSCKSCGKFFYSERSLSKHHRQIHMSGHVCVLCNHQMPKTVTVQEHMEKEHNIRLVFN 366
Query: 253 NKYVYYSFGRFKC 215
+ +SF +C
Sbjct: 367 CRCCNWSFATRRC 379
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -3
Query: 412 ASFTCVNCNGVFNSIRSLLMH--LVHAE-HFA----YRPPAECTFRYYLELKHNINMLAK 254
A +C +C F S RSL H +H H ++ P T + ++E +HNI ++
Sbjct: 307 ARLSCKSCGKFFYSERSLSKHHRQIHMSGHVCVLCNHQMPKTVTVQEHMEKEHNIRLVFN 366
Query: 253 NKYVYYSFGRFKC 215
+ +SF +C
Sbjct: 367 CRCCNWSFATRRC 379
>AC006833-12|AAF60942.1| 218|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform b protein.
Length = 218
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 445 MKGNYILH-SEGASFTC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 305
MK + + H +G +F C CN FNS SL H V +EH PA+C
Sbjct: 1 MKEHMMTHIKKGNTFECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 50
>AC006833-11|AAU87801.1| 175|Caenorhabditis elegans Enhancer of
hand mutation hnd-1protein 3, isoform c protein.
Length = 175
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -3
Query: 445 MKGNYILH-SEGASFTC--VNCNGVFNSIRSLLMHLVHAEHFAY-RPPAEC 305
MK + + H +G +F C CN FNS SL H V +EH PA+C
Sbjct: 1 MKEHMMTHIKKGNTFECPITACNSKFNSFTSLQFH-VDSEHIIRGSSPAKC 50
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 500 RRRGDEAEREQSGYNKRLHEGKLHLAQRRSVL 405
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 243 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 274
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 500 RRRGDEAEREQSGYNKRLHEGKLHLAQRRSVL 405
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 243 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 274
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 500 RRRGDEAEREQSGYNKRLHEGKLHLAQRRSVL 405
RRR ++AERE+S +LH+ +L L R+ L
Sbjct: 259 RRRLEDAERERSQLQSQLHQVQLELDSVRTAL 290
>S66936-1|AAB28820.1| 360|Caenorhabditis elegans Egl-43 protein.
Length = 360
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Frame = -3
Query: 580 KCVYCNFDFQDNREAVKHALSNVYHQSAVAETKLNANRADII--------SVYMKGNYIL 425
KC YC F + +H + N++++ + T N +R + + + +L
Sbjct: 252 KCQYCERSFSISSNLQRH-VRNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTTVHHPLL 310
Query: 424 HSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFA 326
H G SF C C F +L HL E A
Sbjct: 311 HLPGTSFRCQKCERCFGQQTNLDRHLKKHEQAA 343
>S66757-1|AAB28819.1| 581|Caenorhabditis elegans Egl-43 protein.
Length = 581
Score = 29.1 bits (62), Expect = 3.2
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)
Frame = -3
Query: 580 KCVYCNFDFQDNREAVKHALSNVYHQSAVAETKLNANRADII--------SVYMKGNYIL 425
KC YC F + +H + N++++ + T N +R + + + +L
Sbjct: 473 KCQYCERSFSISSNLQRH-VRNIHNKPNTSLTPHNHHRQRSLHNSTSTSTTTTTVHHPLL 531
Query: 424 HSEGASFTCVNCNGVFNSIRSLLMHLVHAEHFA 326
H G SF C C F +L HL E A
Sbjct: 532 HLPGTSFRCQKCERCFGQQTNLDRHLKKHEQAA 564
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = -3
Query: 427 LHSEGASFTCVNCNGVFNSIRSLLMH-LVHAEHFAYRPPAECTFRYYLELKHNINMLAKN 251
+H+ F C CN F+ SL+ H H Y P A+C + + + L K+
Sbjct: 187 IHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPY-PCAQCEKAF-----TDSSTLTKH 240
Query: 250 KYVYYSFGRFKCGVCDADIEEGENAKRHVLSPK 152
+ + C +C + N RH+ + K
Sbjct: 241 LRTHTGHKPYVCSICMMKFTQSGNLHRHMKTHK 273
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 1/93 (1%)
Frame = -3
Query: 427 LHSEGASFTCVNCNGVFNSIRSLLMH-LVHAEHFAYRPPAECTFRYYLELKHNINMLAKN 251
+H+ F C CN F+ SL+ H H Y P A+C + + + L K+
Sbjct: 128 IHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPY-PCAQCEKAF-----TDSSTLTKH 181
Query: 250 KYVYYSFGRFKCGVCDADIEEGENAKRHVLSPK 152
+ + C +C + N RH+ + K
Sbjct: 182 LRTHTGHKPYVCSICMMKFTQSGNLHRHMKTHK 214
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = -3
Query: 499 AVAETKLNANRADIISVYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAY 323
A A+ +LN RA + KGN + C C+ F+ +L+ H +H +
Sbjct: 143 APAQKRLNNKRASYVDHSQKGNL------KKYRCDVCDKTFSRSNTLITHKRIHTGEKPF 196
Query: 322 RPPAECTFRYYLELKHNINMLAKNKYVYYSFGRFKCGVCDADIEEGENAKRHV 164
+ E R + + + L +++ + + + CG+CD N H+
Sbjct: 197 K--CEHCGRAFRQPGN----LTRHRLTHTTVKPYVCGLCDKAFNRASNLHTHM 243
>Z77667-6|CAB01235.2| 870|Caenorhabditis elegans Hypothetical
protein M04B2.1 protein.
Length = 870
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 223 FKCGVCDADIEEGENAKRHVLSPKHRENMG 134
F C +CDA ++E E +H L H++ +G
Sbjct: 713 FVCEICDASVQEKEKYLQH-LQTTHKQMVG 741
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 503 ERRRGDEAEREQSGYNKRL--HEGK-LHLAQRRSVLYVRQLQWRIQFDSVA 360
E + G +E E+S Y +++ HE K L Q+R R+LQW+ QF + +
Sbjct: 414 ELKDGAFSEIEKSEYGEKVIRHEAKKLSREQKRLERKQRKLQWKRQFTTAS 464
>U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical
protein C14C11.2 protein.
Length = 574
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -2
Query: 503 ERRRGDEAEREQSGYNKRL--HEGK-LHLAQRRSVLYVRQLQWRIQFDSVA 360
E + G +E E+S Y +++ HE K L Q+R R+LQW+ QF + +
Sbjct: 414 ELKDGAFSEIEKSEYGEKVIRHEAKKLSREQKRLERKQRKLQWKRQFTTAS 464
>U50135-5|AAN63430.2| 346|Caenorhabditis elegans Hypothetical
protein C52E12.6 protein.
Length = 346
Score = 27.9 bits (59), Expect = 7.3
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -3
Query: 691 EHFESNEHME-TVAKLLRLAVNNEVDKQFAALNKIEDLKCVYCNFDFQDNREAVKH 527
EH +H + ++ N E+++ +K ++L C CN F+ +KH
Sbjct: 196 EHKREEKHCPYKECRGIKFRFNRELNEHVRLQHKSKELSCCVCNMVFRQLSAKIKH 251
>AL110479-29|CAB60311.2| 1044|Caenorhabditis elegans Hypothetical
protein Y105C5B.2 protein.
Length = 1044
Score = 27.9 bits (59), Expect = 7.3
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = -2
Query: 422 QRRSVLYVRQLQWRIQFDSVAFD----AFSA-RRALCLQTAGGVHLPLLSRIKTQH 270
QR+ L ++Q+ WR+ DS++FD + SA RR + TA + + S +H
Sbjct: 431 QRKEHL-IQQMPWRVPLDSISFDDNGGSLSASRRVSTISTARASYSSIFSGNVAEH 485
>AF416567-1|AAL27004.1| 870|Caenorhabditis elegans nuclear zinc
finger protein protein.
Length = 870
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 223 FKCGVCDADIEEGENAKRHVLSPKHRENMG 134
F C +CDA ++E E +H L H++ +G
Sbjct: 713 FVCEICDASVQEKEKYLQH-LQTTHKQMVG 741
>AF040643-2|AAB94961.1| 471|Caenorhabditis elegans Hypothetical
protein F14D2.7 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/55 (20%), Positives = 27/55 (49%)
Frame = -3
Query: 679 SNEHMETVAKLLRLAVNNEVDKQFAALNKIEDLKCVYCNFDFQDNREAVKHALSN 515
+NEH+ +++ NNE +K + + +D +C+ + + V++ + N
Sbjct: 410 NNEHLHDEYNIIQTEDNNEEEKHYTEYSIDQDFECIDDDKHYSGKHSPVENMIVN 464
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = -3
Query: 472 NRADIISVYMKGNYILHSEGASFTCVNCNGVFNSIRSLLMHL-VHAEHFAYRPP 314
+R+D+++ +M+ LH+ ++C CN VF+ L HL H Y P
Sbjct: 379 SRSDMLTRHMR----LHTGAKPYSCPTCNQVFSRSDHLSTHLRTHTGEKPYACP 428
>U41027-2|AAV28335.1| 447|Caenorhabditis elegans Hypothetical
protein R08E3.4a protein.
Length = 447
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/85 (16%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -3
Query: 592 IEDLKCVYCNFDFQDNREAVKHALSNVY----HQSAVAETKLNANRADIISVYMKGNYIL 425
++ +C +C F + +H+++++ V++ + ++ + + +++ + +
Sbjct: 158 VKPYECRFCKKRFFRKDQMQEHSMTHIKTGFGFDCPVSQCNMQFSQHNALRAHLEETHTI 217
Query: 424 HSEGASFTCVNCNGVFNSIRSLLMH 350
S + +C CN +F + R LL+H
Sbjct: 218 SSTNPA-SCKRCNLMFANSRRLLLH 241
>U41027-1|AAV28336.1| 480|Caenorhabditis elegans Hypothetical
protein R08E3.4b protein.
Length = 480
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/85 (16%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Frame = -3
Query: 592 IEDLKCVYCNFDFQDNREAVKHALSNVY----HQSAVAETKLNANRADIISVYMKGNYIL 425
++ +C +C F + +H+++++ V++ + ++ + + +++ + +
Sbjct: 158 VKPYECRFCKKRFFRKDQMQEHSMTHIKTGFGFDCPVSQCNMQFSQHNALRAHLEETHTI 217
Query: 424 HSEGASFTCVNCNGVFNSIRSLLMH 350
S + +C CN +F + R LL+H
Sbjct: 218 SSTNPA-SCKRCNLMFANSRRLLLH 241
>AY314779-1|AAQ84886.1| 454|Caenorhabditis elegans secretin
receptor-like proteinSEB-3 protein.
Length = 454
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 539 LTVILKIEVAINAFQIFDFIQCRKLFV 619
++VIL + AI F IFD IQCR+L +
Sbjct: 125 VSVILLV-AAIVLFSIFDSIQCRRLSI 150
>AL132948-34|CAD31836.1| 248|Caenorhabditis elegans Hypothetical
protein Y39B6A.46 protein.
Length = 248
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 421 SEGASFTCVNCNGVFNSIRSLLMHLVHAEHFAYRPP 314
S+ C C FN+ + L H AEH A RPP
Sbjct: 107 SQPRELYCFTCGDAFNNRKGLYRHGKTAEH-ATRPP 141
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -3
Query: 628 NEVDKQFAALNKIEDLKCVYCNFDFQDNREAVKHALS--NVYHQSAVAE 488
+E+ + + LN+ ++++C+YC + N + K N YHQ + +
Sbjct: 353 SEIWEHYKCLNEKQNVECIYCWKVLKRNDSSTKSMWGHMNAYHQDILRD 401
>AL031620-2|CAA20927.2| 454|Caenorhabditis elegans Hypothetical
protein C18B12.2 protein.
Length = 454
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +2
Query: 539 LTVILKIEVAINAFQIFDFIQCRKLFV 619
++VIL + AI F IFD IQCR+L +
Sbjct: 125 VSVILLV-AAIVLFSIFDSIQCRRLSI 150
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 9.7
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 4/157 (2%)
Frame = -3
Query: 583 LKCVYCNFDFQDNREAVKHALSNVYHQSAVAETKLNANR-ADIISVYMKGNYILHSEGAS 407
L C C FQ + H S+ + + E A + AD +S++ + + G +
Sbjct: 539 LHCEECGRGFQQHSTLDHHVASHNDPRPYICEDCGFATKTADHLSLHRRQH-----TGDN 593
Query: 406 FTC--VNCNGVFNSIRSLLMHLVHAEHFAYRPP-AECTFRYYLELKHNINMLAKNKYVYY 236
F+C C+ L HL H A R + R ++E H L +++ ++
Sbjct: 594 FSCHIAGCDYSSTKKSQLAAHL--RTHMAVRAHLCKICGRGFIEKSH----LVRHERIHL 647
Query: 235 SFGRFKCGVCDADIEEGENAKRHVLSPKHRENMGATY 125
FKC C+ + K H++ KH + T+
Sbjct: 648 EEKPFKCDQCEYASSRRDKLKEHII--KHHNSEVLTF 682
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 9.7
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 4/157 (2%)
Frame = -3
Query: 583 LKCVYCNFDFQDNREAVKHALSNVYHQSAVAETKLNANR-ADIISVYMKGNYILHSEGAS 407
L C C FQ + H S+ + + E A + AD +S++ + + G +
Sbjct: 539 LHCEECGRGFQQHSTLDHHVASHNDPRPYICEDCGFATKTADHLSLHRRQH-----TGDN 593
Query: 406 FTC--VNCNGVFNSIRSLLMHLVHAEHFAYRPP-AECTFRYYLELKHNINMLAKNKYVYY 236
F+C C+ L HL H A R + R ++E H L +++ ++
Sbjct: 594 FSCHIAGCDYSSTKKSQLAAHL--RTHMAVRAHLCKICGRGFIEKSH----LVRHERIHL 647
Query: 235 SFGRFKCGVCDADIEEGENAKRHVLSPKHRENMGATY 125
FKC C+ + K H++ KH + T+
Sbjct: 648 EEKPFKCDQCEYASSRRDKLKEHII--KHHNSEVLTF 682
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 27.5 bits (58), Expect = 9.7
Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 4/157 (2%)
Frame = -3
Query: 583 LKCVYCNFDFQDNREAVKHALSNVYHQSAVAETKLNANR-ADIISVYMKGNYILHSEGAS 407
L C C FQ + H S+ + + E A + AD +S++ + + G +
Sbjct: 539 LHCEECGRGFQQHSTLDHHVASHNDPRPYICEDCGFATKTADHLSLHRRQH-----TGDN 593
Query: 406 FTC--VNCNGVFNSIRSLLMHLVHAEHFAYRPP-AECTFRYYLELKHNINMLAKNKYVYY 236
F+C C+ L HL H A R + R ++E H L +++ ++
Sbjct: 594 FSCHIAGCDYSSTKKSQLAAHL--RTHMAVRAHLCKICGRGFIEKSH----LVRHERIHL 647
Query: 235 SFGRFKCGVCDADIEEGENAKRHVLSPKHRENMGATY 125
FKC C+ + K H++ KH + T+
Sbjct: 648 EEKPFKCDQCEYASSRRDKLKEHII--KHHNSEVLTF 682
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +2
Query: 116 LIDVCGTHILSMLRR*DMSFRVLTLLDVRVANATFESPKRVINVFVFRQ 262
++ +CG H +R + VLT LDVR+ + + FV Q
Sbjct: 675 IVLICGAHFPQTIRLSSNNLTVLTNLDVRLEDIIYSCSSNFSRFFVGSQ 723
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,376,959
Number of Sequences: 27780
Number of extensions: 345625
Number of successful extensions: 1278
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1274
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -