Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15m02
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457564-1|AAL68794.1|   91|Anopheles gambiae hypothetical prote...    28   0.32 
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            25   1.7  
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            25   1.7  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            25   1.7  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            25   1.7  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            25   1.7  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    23   6.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   9.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   9.1  

>AF457564-1|AAL68794.1|   91|Anopheles gambiae hypothetical protein
           17 protein.
          Length = 91

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +2

Query: 182 QSFGSNYTTPKLYI*YCIYVIHIMFTCKKVLFI 280
           Q F +  TT KLY  Y + V+ +M  C  +LFI
Sbjct: 6   QLFSTRETTMKLYSGYRLLVLLVMTVCCLLLFI 38


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 162 CQVFIYNSLLEAITLHLNFIFNIAFMLFI 248
           C VFI N L   ITL +   F++A+  ++
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRYV 153


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 162 CQVFIYNSLLEAITLHLNFIFNIAFMLFI 248
           C VFI N L   ITL +   F++A+  ++
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRYV 153


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 162 CQVFIYNSLLEAITLHLNFIFNIAFMLFI 248
           C VFI N L   ITL +   F++A+  ++
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRYV 153


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 162 CQVFIYNSLLEAITLHLNFIFNIAFMLFI 248
           C VFI N L   ITL +   F++A+  ++
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRYV 153


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 162 CQVFIYNSLLEAITLHLNFIFNIAFMLFI 248
           C VFI N L   ITL +   F++A+  ++
Sbjct: 125 CFVFISNKLASDITLTIGQAFDLAYRRYV 153


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -2

Query: 182 VINKYLTSFVNVVNCEYLYLLFENGFF 102
           +++  LT+FV VV+  YLYL   + ++
Sbjct: 3   LLSYVLTAFVFVVSIAYLYLRSRHNYW 29


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 639  LGDVLXEFARCLHEIIGASHH 577
            L D+L E+A  L  IIGA +H
Sbjct: 2379 LRDLLSEYASHLPAIIGALYH 2399


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 639  LGDVLXEFARCLHEIIGASHH 577
            L D+L E+A  L  IIGA +H
Sbjct: 2380 LRDLLSEYASHLPAIIGALYH 2400


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,154
Number of Sequences: 2352
Number of extensions: 9986
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)