Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15m01
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    25   3.0  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    25   3.0  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.0  
AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    24   4.0  
AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione S-tran...    24   4.0  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    24   5.3  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    24   5.3  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   7.0  

>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 629 PDHPNGLEFLLRDCRNVVNF 570
           PD PN L  +L D R V+N+
Sbjct: 28  PDQPNVLLIILDDFRPVINY 47


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -3

Query: 251 KIDNEITSTASKTSD-CRNIIDHESCFANEFKGTIPTNSDGDTSSSRVEK 105
           K +  + +  S  +D C      E CF +EF+  + +N +   ++  VEK
Sbjct: 125 KAEQCLAANTSPCNDPCEAAYKQELCFLDEFRKYVDSNMNSLIAAVAVEK 174


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 596 RDCRNVVNFFEKKGVSHVQTAEELFKSI 513
           RD    +N F++K  S ++  EE+ + I
Sbjct: 38  RDLNTDINMFQRKYTSEIRRCEEMERKI 65


>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 434 FQIGMPENCMWYELLPISS 490
           F I +PE+C  +E +P+S+
Sbjct: 245 FSIAIPESCKPHERIPVST 263


>AF515521-1|AAM61888.1|  233|Anopheles gambiae glutathione
           S-transferase u1 protein.
          Length = 233

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 187 MNHVLLMNLRVLYPQI 140
           +NH L  NL  LYPQI
Sbjct: 93  VNHRLCFNLAFLYPQI 108


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 564 KKGGLTCANCRRT 526
           ++ G+TCANC+ T
Sbjct: 55  RRSGVTCANCQTT 67


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
          CYP9K1 protein.
          Length = 531

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 14 IGLLFYFVISRDTYFFVN 67
          + LL+Y+V+ R T FF +
Sbjct: 21 LALLYYYVVVRSTRFFAD 38


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 227 LKLFHCQS*LHYQNWQHYQQFYFWQ 301
           L+L   +  LH  NW  +   +FWQ
Sbjct: 779 LQLSMSEDRLHVFNWLPFASCFFWQ 803


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,928
Number of Sequences: 2352
Number of extensions: 12583
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)