Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15l18
(716 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 324 5e-91
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 324 5e-91
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.8
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 324 bits (796), Expect = 5e-91
Identities = 150/187 (80%), Positives = 165/187 (88%)
Frame = -3
Query: 657 YFXXXXXXXXXXXATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI 478
YF ATSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+
Sbjct: 114 YFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGIT 173
Query: 477 GLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPF 298
GLYRGFGVSVQGIIIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPF
Sbjct: 174 GLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPF 233
Query: 297 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 118
DTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLY
Sbjct: 234 DTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLY 293
Query: 117 DEIKKVL 97
DEIK +L
Sbjct: 294 DEIKNLL 300
Score = 38.3 bits (85), Expect = 7e-05
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -2
Query: 715 DKYKQVFLGGVDKKTQF 665
DKYKQVFLGGVDK TQF
Sbjct: 95 DKYKQVFLGGVDKNTQF 111
Score = 37.5 bits (83), Expect = 1e-04
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Frame = -3
Query: 540 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 367
++ + G+ +C +I K G + +RG +V +A F F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 366 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 199
+ + AG S YP D R R+ G+A + + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 198 EGTSAFFKG 172
+G + ++G
Sbjct: 170 DGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 348 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 175
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 174 GAFSNVLR 151
G +NV+R
Sbjct: 75 GNLANVIR 82
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 324 bits (796), Expect = 5e-91
Identities = 150/187 (80%), Positives = 165/187 (88%)
Frame = -3
Query: 657 YFXXXXXXXXXXXATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI 478
YF ATSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+
Sbjct: 114 YFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGIT 173
Query: 477 GLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPF 298
GLYRGFGVSVQGIIIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPF
Sbjct: 174 GLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPF 233
Query: 297 DTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLY 118
DTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLY
Sbjct: 234 DTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLY 293
Query: 117 DEIKKVL 97
DEIK +L
Sbjct: 294 DEIKNLL 300
Score = 38.3 bits (85), Expect = 7e-05
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -2
Query: 715 DKYKQVFLGGVDKKTQF 665
DKYKQVFLGGVDK TQF
Sbjct: 95 DKYKQVFLGGVDKNTQF 111
Score = 37.5 bits (83), Expect = 1e-04
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Frame = -3
Query: 540 QREFSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD--PKNT 367
++ + G+ +C +I K G + +RG +V +A F F D + + KNT
Sbjct: 50 EQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNT 109
Query: 366 PIVISWAIAQTVTTVAGIIS----YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKT 199
+ + AG S YP D R R+ G+A + + +C I K
Sbjct: 110 QFLRYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKA 169
Query: 198 EGTSAFFKG 172
+G + ++G
Sbjct: 170 DGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.006
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -3
Query: 348 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 175
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 174 GAFSNVLR 151
G +NV+R
Sbjct: 75 GNLANVIR 82
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +2
Query: 107 LISSYKTSTKAPPVPLRTLEKAPL 178
L++++KT T+ P + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.316 0.132 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,153
Number of Sequences: 438
Number of extensions: 3462
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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