Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15l17
(703 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061101-1|AAL28649.1| 560|Drosophila melanogaster LD08952p pro... 119 3e-27
AE014297-2465|AAF55513.1| 560|Drosophila melanogaster CG7175-PA... 119 3e-27
AY058430-1|AAL13659.1| 538|Drosophila melanogaster GH20840p pro... 31 1.5
AE014297-2707|AAF55699.1| 538|Drosophila melanogaster CG11407-P... 31 1.5
BT023259-1|AAY55675.1| 364|Drosophila melanogaster IP10662p pro... 29 4.6
AE014297-3503|AAF56262.1| 364|Drosophila melanogaster CG13609-P... 29 4.6
BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p pro... 29 6.1
AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD... 29 6.1
AE014296-1829|ABC66156.1| 142|Drosophila melanogaster CG34001-P... 29 8.1
>AY061101-1|AAL28649.1| 560|Drosophila melanogaster LD08952p
protein.
Length = 560
Score = 119 bits (287), Expect = 3e-27
Identities = 75/229 (32%), Positives = 127/229 (55%), Gaps = 4/229 (1%)
Frame = -1
Query: 700 KDAVLK---IYCMCPETVRERLKELASLKEYQVLSTNPRVLSMVVHKKKMLSRLSKIQAA 530
+DAVL+ + + P+TV ERL++L ++E+QVL TNPR+L +V ++ K RL +
Sbjct: 312 EDAVLRCLEVLTLGPDTVLERLRDLQEIEEFQVLGTNPRILRLVHYQNKARLRLDYLNQL 371
Query: 529 KKQCYSLNHLISSSKVFNNYISNFGNKVCGRDIAILISSSLNREGFDHNKEISESERLKE 350
+ +C SL+ L S+ F + + ++ GRDI + +S+ L ++ ++
Sbjct: 372 RVRCASLHILSCGSEAFAKFARDGSDRTKGRDIVVYLSNVLGKD-------------VQV 418
Query: 349 VLQQLRRHKFWLHTALDVVCDNLQFLKS-RFNDRDIIKNCQLVLYPVTEIEQYITKLLDI 173
+ L RH W H L V L++L+S +F +I N L+LYP+ IE+ + LL
Sbjct: 419 LRNLLSRHPNWCHIPLLHVKQCLEYLRSKKFKLNEIFANIHLLLYPIKRIEEKML-LLQS 477
Query: 172 RDNKEIHSQDRGNMYYNNLNYEKLTGEQILSLVLYEIEKKYHFSGDGIW 26
D +E ++ N++ L+ +IL+L+LY IE ++HF+GDGIW
Sbjct: 478 PDAQE-------DLQLPVANFDSLSNNEILTLILYLIESEFHFTGDGIW 519
>AE014297-2465|AAF55513.1| 560|Drosophila melanogaster CG7175-PA
protein.
Length = 560
Score = 119 bits (287), Expect = 3e-27
Identities = 75/229 (32%), Positives = 127/229 (55%), Gaps = 4/229 (1%)
Frame = -1
Query: 700 KDAVLK---IYCMCPETVRERLKELASLKEYQVLSTNPRVLSMVVHKKKMLSRLSKIQAA 530
+DAVL+ + + P+TV ERL++L ++E+QVL TNPR+L +V ++ K RL +
Sbjct: 312 EDAVLRCLEVLTLGPDTVLERLRDLQEIEEFQVLGTNPRILRLVHYQNKARLRLDYLNQL 371
Query: 529 KKQCYSLNHLISSSKVFNNYISNFGNKVCGRDIAILISSSLNREGFDHNKEISESERLKE 350
+ +C SL+ L S+ F + + ++ GRDI + +S+ L ++ ++
Sbjct: 372 RVRCASLHILSCGSEAFAKFARDGSDRTKGRDIVVYLSNVLGKD-------------VQV 418
Query: 349 VLQQLRRHKFWLHTALDVVCDNLQFLKS-RFNDRDIIKNCQLVLYPVTEIEQYITKLLDI 173
+ L RH W H L V L++L+S +F +I N L+LYP+ IE+ + LL
Sbjct: 419 LRNLLSRHPNWCHIPLLHVKQCLEYLRSKKFKLNEIFANIHLLLYPIKRIEEKML-LLQS 477
Query: 172 RDNKEIHSQDRGNMYYNNLNYEKLTGEQILSLVLYEIEKKYHFSGDGIW 26
D +E ++ N++ L+ +IL+L+LY IE ++HF+GDGIW
Sbjct: 478 PDAQE-------DLQLPVANFDSLSNNEILTLILYLIESEFHFTGDGIW 519
>AY058430-1|AAL13659.1| 538|Drosophila melanogaster GH20840p
protein.
Length = 538
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 352 EVLQQLRRHKFWLHTALDVVCDNLQFLKSRFNDRDIIKNCQLVLYPVTEIEQYITKLLDI 173
E ++R H W HT D+ F+ +D++K ++ YP EIE I+K+ D+
Sbjct: 396 EETHKMRDHHNWFHTGDLGYVDDDGFIYIVERKKDMLKFQNIMYYP-NEIESVISKMPDV 454
>AE014297-2707|AAF55699.1| 538|Drosophila melanogaster CG11407-PA
protein.
Length = 538
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = -1
Query: 352 EVLQQLRRHKFWLHTALDVVCDNLQFLKSRFNDRDIIKNCQLVLYPVTEIEQYITKLLDI 173
E ++R H W HT D+ F+ +D++K ++ YP EIE I+K+ D+
Sbjct: 396 EETHKMRDHHNWFHTGDLGYVDDDGFIYIVERKKDMLKFQNIMYYP-NEIESVISKMPDV 454
>BT023259-1|AAY55675.1| 364|Drosophila melanogaster IP10662p
protein.
Length = 364
Score = 29.5 bits (63), Expect = 4.6
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -1
Query: 511 LNHLISS-SKVFNNYISNFGNKVCGRDIAILISSSLNRE--GFDHNKEISESERLKEVLQ 341
LN LI++ S F I N C ILI S ++ GF N E S SERL+E+LQ
Sbjct: 126 LNLLITAMSSGFAGCIHFPSNPNCNIKALILIYSRDHQALVGFIPNNEDSFSERLQEILQ 185
Query: 340 QLRR 329
+R
Sbjct: 186 GAKR 189
>AE014297-3503|AAF56262.1| 364|Drosophila melanogaster CG13609-PA
protein.
Length = 364
Score = 29.5 bits (63), Expect = 4.6
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -1
Query: 511 LNHLISS-SKVFNNYISNFGNKVCGRDIAILISSSLNRE--GFDHNKEISESERLKEVLQ 341
LN LI++ S F I N C ILI S ++ GF N E S SERL+E+LQ
Sbjct: 126 LNLLITAMSSGFAGCIHFPSNPNCNIKALILIYSRDHQALVGFIPNNEDSFSERLQEILQ 185
Query: 340 QLRR 329
+R
Sbjct: 186 GAKR 189
>BT024213-1|ABC86275.1| 1354|Drosophila melanogaster RE29404p
protein.
Length = 1354
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -1
Query: 700 KDAVLKIYCMCPETVRERLKELASLKEYQVLSTNPRVLSMVVHKKKMLSRLS 545
+D +L+ Y +R L A+LK+YQ + NP + + H+ +L LS
Sbjct: 514 RDNLLRFYMQSRFDIRPDLALAATLKKYQDMYNNPIKATNLEHRDVVLDILS 565
>AE014297-634|AAF53998.3| 1354|Drosophila melanogaster CG31146-PD
protein.
Length = 1354
Score = 29.1 bits (62), Expect = 6.1
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -1
Query: 700 KDAVLKIYCMCPETVRERLKELASLKEYQVLSTNPRVLSMVVHKKKMLSRLS 545
+D +L+ Y +R L A+LK+YQ + NP + + H+ +L LS
Sbjct: 514 RDNLLRFYMQSRFDIRPDLALAATLKKYQDMYNNPIKATNLEHRDVVLDILS 565
>AE014296-1829|ABC66156.1| 142|Drosophila melanogaster CG34001-PA
protein.
Length = 142
Score = 28.7 bits (61), Expect = 8.1
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 181 LDIRDNKEIHSQDRGNMYYNNLNYEKL-TGEQILSLVLYEIEKKY 50
L++R N+++H Q G++YYN L G IL +++K +
Sbjct: 17 LEVRSNQDMHGQFIGDLYYNKYGQPILIIGHHILQGREQKLDKPF 61
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,326,860
Number of Sequences: 53049
Number of extensions: 478360
Number of successful extensions: 1647
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1643
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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