Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15l17
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 26 0.30
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 25 0.70
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 25 0.70
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 25 0.70
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.70
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 25 0.92
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 24 1.6
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.1
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 22 4.9
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 22 4.9
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 22 4.9
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 4.9
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 4.9
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 4.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 8.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 8.6
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 26.2 bits (55), Expect = 0.30
Identities = 11/33 (33%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = -1
Query: 268 SRFNDRDIIKNCQLV-LYPVTEIEQYI-TKLLD 176
+ +ND ++NC+LV L+ + + ++Y+ +KL+D
Sbjct: 159 NNYNDPSNVRNCELVGLHDLDQSQEYVRSKLVD 191
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.0 bits (52), Expect = 0.70
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 187 KLLDIRDNKEIHSQDRGNMYYNNLNY 110
K++ NK IH+ + YNN NY
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNY 105
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 271 KSRFNDRDIIKNCQLVLYPVTEIEQ 197
K +N+ + NC+ + Y + IEQ
Sbjct: 97 KYNYNNNNYNNNCKKLYYNINYIEQ 121
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.0 bits (52), Expect = 0.70
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 187 KLLDIRDNKEIHSQDRGNMYYNNLNY 110
K++ NK IH+ + YNN NY
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNY 105
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 271 KSRFNDRDIIKNCQLVLYPVTEIEQ 197
K +N+ + NC+ + Y + IEQ
Sbjct: 97 KYNYNNNNYNNNCKKLYYNINYIEQ 121
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 25.0 bits (52), Expect = 0.70
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 187 KLLDIRDNKEIHSQDRGNMYYNNLNY 110
K++ NK IH+ + YNN NY
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNNNY 105
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 271 KSRFNDRDIIKNCQLVLYPVTEIEQ 197
K +N+ + NC+ + Y + IEQ
Sbjct: 97 KYNYNNNNYNNNCKKLYYNINYIEQ 121
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.70
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -1
Query: 187 KLLDIRDNKEIHSQDRGNMYYNNLNY 110
K++ NK IH+ + YNN NY
Sbjct: 313 KIISSLSNKTIHNNNNYKYNYNNNNY 338
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = +1
Query: 55 SSLSHIILNSESVHQLAFHNSNYCNTYF 138
SSLS+ +++ + ++ ++N+NY N +
Sbjct: 316 SSLSNKTIHNNNNYKYNYNNNNYNNNNY 343
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.6 bits (51), Expect = 0.92
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 154 HSQDRGNMYYNNLNYEKL 101
+S + N YYNN NY+KL
Sbjct: 309 NSCNYSNNYYNNNNYKKL 326
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.8 bits (49), Expect = 1.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -1
Query: 187 KLLDIRDNKEIHSQDRGNMYYNNLNY 110
K++ N+ IH+ + YNN NY
Sbjct: 80 KIISSLSNRTIHNNNNYKYNYNNNNY 105
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = -1
Query: 271 KSRFNDRDIIKNCQLVLYPVTEIEQ 197
K +N+ + NC+ + Y + IEQ
Sbjct: 97 KYNYNNNNYNNNCKKLYYNINYIEQ 121
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 190 TKLLDIRDNKEIHSQDRGNMYYNNLNYEKLTGEQI 86
+K++ NK IH+ + Y L Y + EQI
Sbjct: 312 SKIISSLSNKTIHNNNNYKNYNKKLYYNIINIEQI 346
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.9
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = -1
Query: 391 DHNKEISESERLKEVLQQLRRHKFWLHTALDVVCDNLQFLKSRFNDRDIIKN-CQLVLYP 215
D N+E E +R E L + K L+ ++ +SR +++ KN + Y
Sbjct: 7 DRNREYKEKDRRYEKLHN-EKEKL-----LEERTSRKRYSRSREREQNSYKNEREYRKYR 60
Query: 214 VTEIEQYIT-KLLDIRDNKEIHSQDRGNMYYNNLNYEKL 101
T E+ K + +I S N YNN NY+KL
Sbjct: 61 ETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKL 99
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.9
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = -1
Query: 391 DHNKEISESERLKEVLQQLRRHKFWLHTALDVVCDNLQFLKSRFNDRDIIKN-CQLVLYP 215
D N+E E +R E L + K L+ ++ +SR +++ KN + Y
Sbjct: 7 DRNREYKEKDRRYEKLHN-EKEKL-----LEERTSRKRYSRSREREQNSYKNEREYRKYR 60
Query: 214 VTEIEQYIT-KLLDIRDNKEIHSQDRGNMYYNNLNYEKL 101
T E+ K + +I S N YNN NY+KL
Sbjct: 61 ETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKL 99
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.9
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = -1
Query: 391 DHNKEISESERLKEVLQQLRRHKFWLHTALDVVCDNLQFLKSRFNDRDIIKN-CQLVLYP 215
D N+E E +R E L + K L+ ++ +SR +++ KN + Y
Sbjct: 7 DRNREYKEKDRRYEKLHN-EKEKL-----LEERTSRKRYSRSREREQNSYKNEREYRKYR 60
Query: 214 VTEIEQYIT-KLLDIRDNKEIHSQDRGNMYYNNLNYEKL 101
T E+ K + +I S N YNN NY+KL
Sbjct: 61 ETSKERSRDRKEREKSKEHKIISSLSNNYNYNNNNYKKL 99
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 4.9
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 6/34 (17%)
Frame = -1
Query: 187 KLLDIRDNKEIHSQDR-----GNMY-YNNLNYEK 104
K++ NK IH+ + N Y YNN NY K
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNNKYNYNNNNYNK 113
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -1
Query: 187 KLLDIRDNKEIHSQDRGNMYYNNLNYEKL 101
K++ NK IH+ + YNN N +KL
Sbjct: 80 KIISSLSNKTIHNNNNYKYNYNN-NCKKL 107
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.9
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = -1
Query: 208 EIEQYITKLLDIRDNKEIHSQDRGNMYYNN 119
E+E+ IT LD R + N+ Y N
Sbjct: 73 ELERNITIKLDTRAEDSTRGEQEANLGYTN 102
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 151 SQDRGNMYYNNLNYEKLTGEQ 89
S+DR Y + YEKL E+
Sbjct: 5 SRDRNREYRKDRRYEKLHNEK 25
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 151 SQDRGNMYYNNLNYEKLTGEQ 89
S+DR Y + YEKL E+
Sbjct: 5 SRDRNREYRKDRRYEKLHNEK 25
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = -1
Query: 175 IRDNKEIHSQDRGNMYYNNLNY 110
I +N ++ + N YNN NY
Sbjct: 90 IHNNNNYNNNNYNNYNYNNNNY 111
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,906
Number of Sequences: 438
Number of extensions: 3561
Number of successful extensions: 34
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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