Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15l12
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 355 9e-98
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 355 9e-98
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 355 9e-98
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 355 9e-98
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 355 9e-98
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 355 9e-98
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 355 9e-98
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 355 9e-98
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 355 9e-98
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 355 9e-98
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 355 9e-98
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 355 9e-98
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 353 3e-97
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 353 3e-97
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 256 6e-68
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 9e-59
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 175 2e-43
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 164 2e-40
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 122 9e-28
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.24
BC035907-1|AAH35907.1| 308|Homo sapiens USP51 protein protein. 32 2.3
AJ583823-1|CAE47750.2| 711|Homo sapiens ubiquitin specific prot... 32 2.3
AK125913-1|BAC86342.1| 628|Homo sapiens protein ( Homo sapiens ... 31 4.0
AJ318887-1|CAC83011.2| 1090|Homo sapiens ASPP1 protein protein. 31 4.0
AB018314-1|BAA34491.1| 948|Homo sapiens KIAA0771 protein protein. 31 4.0
AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens ... 31 5.2
AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens ... 31 5.2
EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein. 30 9.1
BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein. 30 9.1
BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26 pro... 30 9.1
BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein. 30 9.1
AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26 ... 30 9.1
AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic pre... 30 9.1
AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens ... 30 9.1
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 30 9.1
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 27 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 86
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 87 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 146
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 147 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 206
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 207 VSIVEPKDEILPTTPISE 224
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 8 RKFVADGIFKAELNEFLT 25
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 27 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 86
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 87 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 146
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 147 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 206
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 207 VSIVEPKDEILPTTPISE 224
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 8 RKFVADGIFKAELNEFLT 25
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 355 bits (873), Expect = 9e-98
Identities = 171/198 (86%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 353 bits (869), Expect = 3e-97
Identities = 170/198 (85%), Positives = 181/198 (91%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 353 bits (868), Expect = 3e-97
Identities = 170/198 (85%), Positives = 180/198 (90%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRA 280
AEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRA
Sbjct: 88 AEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 147
Query: 279 KSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDH 100
KSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH
Sbjct: 148 KSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDH 207
Query: 99 ILVTEPKDEPVPLEPTSE 46
+ + EPKDE +P P SE
Sbjct: 208 VSIVEPKDEILPTTPISE 225
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 256 bits (627), Expect = 6e-68
Identities = 121/140 (86%), Positives = 127/140 (90%)
Frame = -1
Query: 465 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 286
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 285 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 106
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 105 DHILVTEPKDEPVPLEPTSE 46
DH+ + EPKDE +P P SE
Sbjct: 121 DHVSIVEPKDEILPTTPISE 140
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 9e-59
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = -1
Query: 537 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 358
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 357 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 178
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 177 LGIKVKI 157
V +
Sbjct: 126 WDTSVHL 132
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 175 bits (425), Expect = 2e-43
Identities = 81/99 (81%), Positives = 86/99 (86%)
Frame = -1
Query: 342 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 163
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 162 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSE 46
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISE 99
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 164 bits (399), Expect = 2e-40
Identities = 81/90 (90%), Positives = 86/90 (95%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRGLCAIAQAESLRYKLIGGLAVRR 370
AEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 88 AEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 122 bits (295), Expect = 9e-28
Identities = 60/68 (88%), Positives = 64/68 (94%)
Frame = -1
Query: 639 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELY 460
ELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELY
Sbjct: 28 ELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELY 87
Query: 459 AEKVATRG 436
AEKVATRG
Sbjct: 88 AEKVATRG 95
Score = 38.3 bits (85), Expect = 0.026
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -3
Query: 697 RKFVGDGVFKAELNEFLT 644
RKFV DG+FKAELNEFLT
Sbjct: 9 RKFVADGIFKAELNEFLT 26
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 35.1 bits (77), Expect = 0.24
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -3
Query: 199 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPR 59
CAS RS R Q Q P P A RP PG+ APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>BC035907-1|AAH35907.1| 308|Homo sapiens USP51 protein protein.
Length = 308
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 600 PALPRRSTRPRPAPLVRNSLSSALKTPSP 686
P PRR RPRP P R+ L P P
Sbjct: 97 PVCPRRKPRPRPQPRARSRSQPGLSAPPP 125
>AJ583823-1|CAE47750.2| 711|Homo sapiens ubiquitin specific
proteinase 51 protein.
Length = 711
Score = 31.9 bits (69), Expect = 2.3
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 600 PALPRRSTRPRPAPLVRNSLSSALKTPSP 686
P PRR RPRP P R+ L P P
Sbjct: 97 PVCPRRKPRPRPQPRARSRSQPGLSAPPP 125
>AK125913-1|BAC86342.1| 628|Homo sapiens protein ( Homo sapiens
cDNA FLJ43925 fis, clone TESTI4012505, weakly similar
to Tumor suppressor p53-binding protein 2. ).
Length = 628
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 600 PALPRRSTRPRPAPLVRNSLSSALKTPSP 686
P LP ST P P P + SLS+ P P
Sbjct: 479 PVLPSGSTSPSPLPFLHGSLSTGTPQPQP 507
>AJ318887-1|CAC83011.2| 1090|Homo sapiens ASPP1 protein protein.
Length = 1090
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 600 PALPRRSTRPRPAPLVRNSLSSALKTPSP 686
P LP ST P P P + SLS+ P P
Sbjct: 612 PVLPSGSTSPSPLPFLHGSLSTGTPQPQP 640
>AB018314-1|BAA34491.1| 948|Homo sapiens KIAA0771 protein protein.
Length = 948
Score = 31.1 bits (67), Expect = 4.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 600 PALPRRSTRPRPAPLVRNSLSSALKTPSP 686
P LP ST P P P + SLS+ P P
Sbjct: 470 PVLPSGSTSPSPLPFLHGSLSTGTPQPQP 498
>AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens
cDNA FLJ45222 fis, clone BRCAN2019953. ).
Length = 177
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 647 H*GSWPRTGTPAWKCGSLPSARRSL-LWPPGHRVCS 543
H GSWPR P + S PS ++L LW R+ S
Sbjct: 81 HGGSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 116
>AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens
cDNA FLJ45020 fis, clone BRAWH3016123. ).
Length = 206
Score = 30.7 bits (66), Expect = 5.2
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 647 H*GSWPRTGTPAWKCGSLPSARRSL-LWPPGHRVCS 543
H GSWPR P + S PS ++L LW R+ S
Sbjct: 110 HGGSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 145
>EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein.
Length = 514
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 478 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 606
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein.
Length = 404
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 478 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 606
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 295 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 336
>BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26
protein.
Length = 514
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 478 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 606
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein.
Length = 373
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 478 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 606
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 264 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 305
>AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26
protein.
Length = 514
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 478 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 606
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic
preconditioning upregulated protein 2 protein.
Length = 498
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 478 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 606
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 389 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 430
>AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21016 fis, clone CAE05735. ).
Length = 367
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 478 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 606
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 258 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 299
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 29.9 bits (64), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +1
Query: 478 LWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPH 606
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 616 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 657
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,971,945
Number of Sequences: 237096
Number of extensions: 2616708
Number of successful extensions: 11415
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 10733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11414
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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