Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15k19
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 308 1e-83
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 308 1e-83
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 308 1e-83
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 307 2e-83
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 307 3e-83
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 305 9e-83
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 301 1e-81
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 166 8e-41
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 157 3e-38
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 140 4e-33
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 60 8e-09
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 49 2e-05
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 49 2e-05
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 49 2e-05
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 49 2e-05
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 49 2e-05
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 48 3e-05
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 3.0
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 3.0
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 3.0
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 3.0
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 3.0
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 31 4.0
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 31 4.0
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 31 4.0
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 5.3
BC024176-1|AAH24176.1| 399|Homo sapiens ZNF302 protein protein. 30 9.2
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 30 9.2
AF326206-1|AAK11224.1| 399|Homo sapiens ZNF140-like transcripti... 30 9.2
AF265236-1|AAF74775.1| 478|Homo sapiens ZNF135-like protein pro... 30 9.2
AF155656-1|AAF67475.1| 411|Homo sapiens zinc finger protein ZNF... 30 9.2
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 308 bits (757), Expect = 1e-83
Identities = 147/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 307 bits (754), Expect = 2e-83
Identities = 146/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
G+NTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GRNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 307 bits (753), Expect = 3e-83
Identities = 146/224 (65%), Positives = 175/224 (78%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG++ +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYERVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 305 bits (749), Expect = 9e-83
Identities = 146/224 (65%), Positives = 174/224 (77%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 279
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 301 bits (740), Expect = 1e-81
Identities = 145/224 (64%), Positives = 172/224 (76%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 320
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLL
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLL 175
Query: 319 NMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 140
NMLNISPFS+GLV++QV+D+G+I+ PE+LD E L ++F GV NVA++ L GYPT+A
Sbjct: 176 NMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVA 235
Query: 139 SAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
S PHSI NG+K +L +K F+ DPS F A A
Sbjct: 236 SVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPSAFVAAA 279
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 166 bits (403), Expect = 8e-41
Identities = 78/100 (78%), Positives = 86/100 (86%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 115
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 380
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 116 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 60.1 bits (139), Expect = 8e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = -2
Query: 193 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAA 14
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F A
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 215
Query: 13 VA 8
A
Sbjct: 216 AA 217
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 157 bits (382), Expect = 3e-38
Identities = 76/100 (76%), Positives = 85/100 (85%)
Frame = -2
Query: 679 GKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGA 500
GKNTMMRKAI+ HL+NNPALEKLLP ++GNVGFVFT+ DL E+RD LL NKV A AR GA
Sbjct: 56 GKNTMMRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGA 114
Query: 499 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 380
IAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 115 IAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 60.1 bits (139), Expect = 8e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = -2
Query: 193 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAA 14
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F A
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 214
Query: 13 VA 8
A
Sbjct: 215 AA 216
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 140 bits (339), Expect = 4e-33
Identities = 67/118 (56%), Positives = 84/118 (71%)
Frame = -2
Query: 361 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVAN 182
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 181 VAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAAVA 8
VA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F A A
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAA 119
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 60.1 bits (139), Expect = 8e-09
Identities = 29/62 (46%), Positives = 36/62 (58%)
Frame = -2
Query: 193 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFAA 14
GV NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F A
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 60
Query: 13 VA 8
A
Sbjct: 61 AA 62
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 48.8 bits (111), Expect = 2e-05
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Frame = -2
Query: 682 WGKNTMMRKAI----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 515
+GKN +M A+ D +N L ++ ++G VG +FT EV + +
Sbjct: 67 FGKNKVMMVALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDY 124
Query: 514 ARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGA 338
AR G A +V + P + L +PT + +G + +++D + K GD +
Sbjct: 125 ARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTP 184
Query: 337 SEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 218
+A +L + + + +K ++DS + ++ D PE
Sbjct: 185 EQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 48.8 bits (111), Expect = 2e-05
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Frame = -2
Query: 682 WGKNTMMRKAI----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 515
+GKN +M A+ D +N L ++ ++G VG +FT EV + +
Sbjct: 67 FGKNKVMMVALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDY 124
Query: 514 ARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGA 338
AR G A +V + P + L +PT + +G + +++D + K GD +
Sbjct: 125 ARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTP 184
Query: 337 SEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 218
+A +L + + + +K ++DS + ++ D PE
Sbjct: 185 EQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 48.8 bits (111), Expect = 2e-05
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Frame = -2
Query: 682 WGKNTMMRKAI----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 515
+GKN +M A+ D +N L ++ ++G VG +FT EV + +
Sbjct: 67 FGKNKVMMVALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDY 124
Query: 514 ARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGA 338
AR G A +V + P + L +PT + +G + +++D + K GD +
Sbjct: 125 ARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTP 184
Query: 337 SEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 218
+A +L + + + +K ++DS + ++ D PE
Sbjct: 185 EQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 48.8 bits (111), Expect = 2e-05
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Frame = -2
Query: 682 WGKNTMMRKAI----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 515
+GKN +M A+ D +N L ++ ++G VG +FT EV + +
Sbjct: 67 FGKNKVMMVALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDY 124
Query: 514 ARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGA 338
AR G A +V + P + L +PT + +G + +++D + K GD +
Sbjct: 125 ARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTP 184
Query: 337 SEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 218
+A +L + + + +K ++DS + ++ D PE
Sbjct: 185 EQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 48.8 bits (111), Expect = 2e-05
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Frame = -2
Query: 682 WGKNTMMRKAI----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 515
+GKN +M A+ D +N L ++ ++G VG +FT EV + +
Sbjct: 67 FGKNKVMMVALGRSPSDEYKDN--LHQVSKRLRGEVGLLFTNRTKEEVNEWFTKYTEMDY 124
Query: 514 ARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGA 338
AR G A +V + P + L +PT + +G + +++D + K GD +
Sbjct: 125 ARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTP 184
Query: 337 SEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 218
+A +L + + + +K ++DS + ++ D PE
Sbjct: 185 EQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 48.0 bits (109), Expect = 3e-05
Identities = 37/160 (23%), Positives = 71/160 (44%), Gaps = 5/160 (3%)
Frame = -2
Query: 682 WGKNTMMRKAI----KDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAP 515
+GKN +M A+ D +N L ++ ++G VG +FT EV + +
Sbjct: 67 FGKNKVMMVALGRSPSDEYKDN--LHQVSKTLRGEVGLLFTNRTKEEVNEWFTKYTEMDY 124
Query: 514 ARPGAIAPLSVVIPAHNTGLGPEKTS-FFQALSIPTKISKGTIEIINDVHILKPGDKVGA 338
AR G A +V + P + L +PT + +G + +++D + K GD +
Sbjct: 125 ARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEGDVLTP 184
Query: 337 SEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPE 218
+A +L + + + +K ++DS + ++ D PE
Sbjct: 185 EQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 177 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 356
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 249 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 307
Query: 357 GFKMCTSL 380
G +S+
Sbjct: 308 GLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 177 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 356
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 357 GFKMCTSL 380
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 177 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 356
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 357 GFKMCTSL 380
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 177 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 356
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 357 GFKMCTSL 380
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +3
Query: 177 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 356
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 357 GFKMCTSL 380
G +S+
Sbjct: 273 GLSTSSSV 280
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 4.0
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 343 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 167
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 31.1 bits (67), Expect = 4.0
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 343 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 167
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 31.1 bits (67), Expect = 4.0
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = -2
Query: 343 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 167
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 139
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 261 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 380
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>BC024176-1|AAH24176.1| 399|Homo sapiens ZNF302 protein protein.
Length = 399
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 531 FSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 635
FS+ S T+ +S KP + CG SFSR LL
Sbjct: 266 FSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSLL 300
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 29.9 bits (64), Expect = 9.2
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Frame = -3
Query: 654 PSKTTWTTIQPSRNCCHTSRATLASCSPAETSWRSV----TNCWRTKSK---LQLVPVPL 496
P TT TT P+ + TS AT ++ S TS S T T SK L P P+
Sbjct: 46 PVPTTSTTSAPTTST--TSAATTSTISAPTTSTTSAPTTSTTSASTASKTSGLGTTPSPI 103
Query: 495 PHCQSSFPPTT 463
P ++ PPTT
Sbjct: 104 PTTSTTSPPTT 114
>AF326206-1|AAK11224.1| 399|Homo sapiens ZNF140-like transcription
factor protein.
Length = 399
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 531 FSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 635
FS+ S T+ +S KP + CG SFSR LL
Sbjct: 266 FSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSLL 300
>AF265236-1|AAF74775.1| 478|Homo sapiens ZNF135-like protein
protein.
Length = 478
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 531 FSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 635
FS+ S T+ +S KP + CG SFSR LL
Sbjct: 345 FSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSLL 379
>AF155656-1|AAF67475.1| 411|Homo sapiens zinc finger protein
ZNF140-like protein protein.
Length = 411
Score = 29.9 bits (64), Expect = 9.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 531 FSNSLSRTSTRSPRVNTKPTLPLMCGNSFSRAGLL 635
FS+ S T+ +S KP + CG SFSR LL
Sbjct: 266 FSHGSSLTNHQSTHTGEKPYECMNCGKSFSRVSLL 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,826,529
Number of Sequences: 237096
Number of extensions: 2872309
Number of successful extensions: 7392
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 6921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7391
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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