Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15k15
(719 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069831-1|AAL39976.1| 485|Drosophila melanogaster SD07771p pro... 30 3.6
AL138972-12|CAB72295.1| 721|Drosophila melanogaster EG:BACR7C10... 30 3.6
AE014298-419|ABC67171.1| 485|Drosophila melanogaster CG9900-PC,... 30 3.6
AE014298-418|AAF45794.1| 721|Drosophila melanogaster CG9900-PB,... 30 3.6
X64390-1|CAB76122.1| 721|Drosophila melanogaster zw10 protein p... 29 4.8
AY075226-1|AAL68093.1| 495|Drosophila melanogaster AT17674p pro... 29 6.4
AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-P... 29 6.4
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 29 8.4
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 29 8.4
>AY069831-1|AAL39976.1| 485|Drosophila melanogaster SD07771p
protein.
Length = 485
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 661 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 485
K K V + V + + D+ + ++A +++ + +LE YET+K+K + YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193
Query: 484 AMLSTLEMTQPLLEI 440
S E L+++
Sbjct: 194 LQQSLQERFDRLVQL 208
>AL138972-12|CAB72295.1| 721|Drosophila melanogaster
EG:BACR7C10.3,FBgn0004643;mit(1)15 protein.
Length = 721
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 661 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 485
K K V + V + + D+ + ++A +++ + +LE YET+K+K + YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193
Query: 484 AMLSTLEMTQPLLEI 440
S E L+++
Sbjct: 194 LQQSLQERFDRLVQL 208
>AE014298-419|ABC67171.1| 485|Drosophila melanogaster CG9900-PC,
isoform C protein.
Length = 485
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 661 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 485
K K V + V + + D+ + ++A +++ + +LE YET+K+K + YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193
Query: 484 AMLSTLEMTQPLLEI 440
S E L+++
Sbjct: 194 LQQSLQERFDRLVQL 208
>AE014298-418|AAF45794.1| 721|Drosophila melanogaster CG9900-PB,
isoform B protein.
Length = 721
Score = 29.9 bits (64), Expect = 3.6
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 661 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 485
K K V + V + + D+ + ++A +++ + +LE YET+K+K + YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193
Query: 484 AMLSTLEMTQPLLEI 440
S E L+++
Sbjct: 194 LQQSLQERFDRLVQL 208
>X64390-1|CAB76122.1| 721|Drosophila melanogaster zw10 protein
protein.
Length = 721
Score = 29.5 bits (63), Expect = 4.8
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 661 KCIKMKRVKCNKVRTVTEIVNSDEKIQKTYELAEFDLKNL-SSLESYETLKIKLALSKYM 485
K K V + V + + D+ + ++A +++ + +LE YET+K+K + YM
Sbjct: 134 KATKDYLVLLDLVGRLRAFIYGDDSVDGDAQVATPEVRRIFKALECYETIKVKYHVQAYM 193
Query: 484 AMLSTLEMTQPLLEI 440
S E L+++
Sbjct: 194 LQQSLQERFARLVQL 208
>AY075226-1|AAL68093.1| 495|Drosophila melanogaster AT17674p
protein.
Length = 495
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 238 RPSIVKMLSREFDTEALVNFENDNCNVRIA-KTFGASKRKNTT-RSDDYESNKQPDYDMD 65
+P++ + +RE EAL +FE + I K F + + K++ DD + + D +
Sbjct: 401 KPAVTQQNNRENKPEALEDFERSSILTSIMDKVFSSQESKSSNGNCDDDKIPELEDINKP 460
Query: 64 LSDFSITEVEATS 26
++D + + E+ S
Sbjct: 461 INDMFVEDPESVS 473
>AE014134-1754|AAF52849.2| 1317|Drosophila melanogaster CG13131-PA
protein.
Length = 1317
Score = 29.1 bits (62), Expect = 6.4
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = -2
Query: 238 RPSIVKMLSREFDTEALVNFENDNCNVRIA-KTFGASKRKNTT-RSDDYESNKQPDYDMD 65
+P++ + +RE EAL +FE + I K F + + K++ DD + + D +
Sbjct: 401 KPAVTQQNNRENKPEALEDFERSSILTSIMDKVFSSQESKSSNGNCDDDKIPELEDINKP 460
Query: 64 LSDFSITEVEATS 26
++D + + E+ S
Sbjct: 461 INDMFVEDPESVS 473
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 169 NCNVRIAKTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITE 41
N N+R + T+ +K T+S ++PD+ L D+ +TE
Sbjct: 15052 NTNLRDSGTYTCKVKKQETQSTVEVLQRKPDFIKVLEDYEVTE 15094
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 169 NCNVRIAKTFGASKRKNTTRSDDYESNKQPDYDMDLSDFSITE 41
N N+R + T+ +K T+S ++PD+ L D+ +TE
Sbjct: 16911 NTNLRDSGTYTCKVKKQETQSTVEVLQRKPDFIKVLEDYEVTE 16953
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,585,291
Number of Sequences: 53049
Number of extensions: 629183
Number of successful extensions: 1489
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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