Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15k14
(708 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 118 7e-29
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 64 9e-13
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 56 3e-10
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 46 3e-07
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 36 5e-04
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 32 0.005
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 31 0.008
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 28 0.100
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 24 1.2
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 23 3.7
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 23 3.7
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 5.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 6.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 8.7
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.7
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 118 bits (283), Expect = 7e-29
Identities = 67/230 (29%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
Frame = -2
Query: 674 LTKEEIRCALCNXVFPYFHALNKHMNEHFSN----YVCETCGLGFVDKGRFVMHQQRHE- 510
+ ++ +C LC F + H+ H Y C CG F R H + H
Sbjct: 57 IEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTG 116
Query: 509 QGAFPCESCGKVFKAEYNRDLHVDRVHRKRGRVYCPKCDVKLMSYPQKLKHLVEVH-GEQ 333
+ + CE C K F + N +H R+H K C C+ + + KL + +H GE+
Sbjct: 117 EKPYQCEYCSKSFSVKENLSVH-RRIHTKERPYKCDVCE-RAFEHSGKLHRHMRIHTGER 174
Query: 332 PMSFPCTMCDKVCETRRTLTIHWRKDHLKDFRYECQCCGQKFFTRFALNNHMPTHTGERN 153
P CT+C K L IH R H + Y C+ CG+ F L H THTGE+
Sbjct: 175 PHK--CTVCSKTFIQSGQLVIHMRT-HTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKP 231
Query: 152 FKCKVCEKSYPRLKTLKDHMRIHTNDRRYRCHICGQAFIQNCSLKGHMKS 3
+ C +C KS+ LK H H ++ Y+C +C + F +++ H+K+
Sbjct: 232 YTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIKT 281
Score = 93.1 bits (221), Expect = 2e-21
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 3/200 (1%)
Frame = -2
Query: 668 KEEIRCALCNXVFPYFHALNKHMNEHFSN--YVCETCGLGFVDKGRFVMHQQRH-EQGAF 498
++ RC +C F L +H H Y CE C F K +H++ H ++ +
Sbjct: 89 EDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHRRIHTKERPY 148
Query: 497 PCESCGKVFKAEYNRDLHVDRVHRKRGRVYCPKCDVKLMSYPQKLKHLVEVHGEQPMSFP 318
C+ C + F+ H+ R+H C C + Q + H+ GE+P +
Sbjct: 149 KCDVCERAFEHSGKLHRHM-RIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKP--YV 205
Query: 317 CTMCDKVCETRRTLTIHWRKDHLKDFRYECQCCGQKFFTRFALNNHMPTHTGERNFKCKV 138
C C K + L +H R H + Y C CG+ F L H H GE+ +KC +
Sbjct: 206 CKACGKGFTCSKQLKVHTRT-HTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTL 264
Query: 137 CEKSYPRLKTLKDHMRIHTN 78
C +++ KT++ H++ H++
Sbjct: 265 CHETFGSKKTMELHIKTHSD 284
Score = 45.6 bits (103), Expect = 5e-07
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = -2
Query: 206 FTRFALNNHMP-THTGERNFKCKVCEKSYPRLKTLKDHMRIHTNDRR--YRCHICGQAFI 36
FT A + P T+ E+ ++C +C+K++ + + H+R H + YRC+ICG+ F
Sbjct: 43 FTSPACGSETPLTNIEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTFA 102
Query: 35 QNCSLKGHMKS 3
L H ++
Sbjct: 103 VPARLTRHYRT 113
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 64.5 bits (150), Expect = 9e-13
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -2
Query: 260 KDHLKDFRYECQCCGQKFFTRFALNNHMPTHTGERNFKCKVCEKSYPRLKTLKDHMRIHT 81
+ H + +EC C ++F L HM HTGE+ + C C++ + ++ L+ H+R+HT
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHT 61
Query: 80 NDRRYRCHIC 51
+R Y C +C
Sbjct: 62 GERPYACELC 71
Score = 62.9 bits (146), Expect = 3e-12
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = -2
Query: 173 THTGERNFKCKVCEKSYPRLKTLKDHMRIHTNDRRYRCHICGQAFIQNCSLKGHMK 6
THTGE+ F+C C K + R LK HMR+HT ++ Y C C + F+Q +L+ H++
Sbjct: 3 THTGEKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLR 58
Score = 35.9 bits (79), Expect = 4e-04
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -2
Query: 500 FPCESCGKVFKAEYNRDLHVDRVHRKRGRVYCPKCDVKLMSYPQKLKHLVEVHGEQPMSF 321
F C C K F +++ H+ R+H +C CD + + +HL GE+P +
Sbjct: 10 FECPECHKRFTRDHHLKTHM-RLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERP--Y 66
Query: 320 PCTMC 306
C +C
Sbjct: 67 ACELC 71
Score = 27.5 bits (58), Expect = 0.13
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -2
Query: 92 RIHTNDRRYRCHICGQAFIQNCSLKGHMK 6
R HT ++ + C C + F ++ LK HM+
Sbjct: 2 RTHTGEKPFECPECHKRFTRDHHLKTHMR 30
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 56.0 bits (129), Expect = 3e-10
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = -2
Query: 359 HLVEVHGEQPMSFPCTMCDKVCETRRTLTIHWRKDHLKDFRYECQCCGQKFFTRFALNNH 180
H G+ SF C C+KV + L +H R L +C CG+ F + L H
Sbjct: 5 HCAAAEGQAKKSFSCKYCEKVYVSLGALKMHIRTHTLP---CKCHLCGKAFSRPWLLQGH 61
Query: 179 MPTHTGERNFKCKVCEKSY 123
+ THTGE+ F C+ C +++
Sbjct: 62 IRTHTGEKPFSCQHCNRAF 80
Score = 53.2 bits (122), Expect = 2e-09
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = -2
Query: 161 ERNFKCKVCEKSYPRLKTLKDHMRIHTNDRRYRCHICGQAFIQNCSLKGHMKS 3
+++F CK CEK Y L LK H+R HT +CH+CG+AF + L+GH+++
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRT 64
Score = 50.0 bits (114), Expect = 2e-08
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = -2
Query: 236 YECQCCGQKFFTRFALNNHMPTHTGERNFKCKVCEKSYPRLKTLKDHMRIHTNDRRYRCH 57
+ C+ C + + + AL H+ THT KC +C K++ R L+ H+R HT ++ + C
Sbjct: 17 FSCKYCEKVYVSLGALKMHIRTHT--LPCKCHLCGKAFSRPWLLQGHIRTHTGEKPFSCQ 74
Query: 56 ICGQAF 39
C +AF
Sbjct: 75 HCNRAF 80
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = -2
Query: 191 LNNHMPTHTGERNFKCKVCEKSYPRLKTLKDHMRIHTNDRRYRCHICGQAFIQNCSLKGH 12
L H+ H G + FKC+ C S L H++ H+N +YRC C A SLK H
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLH 63
Query: 11 MK 6
++
Sbjct: 64 LR 65
Score = 35.5 bits (78), Expect = 5e-04
Identities = 13/61 (21%), Positives = 31/61 (50%)
Frame = -2
Query: 260 KDHLKDFRYECQCCGQKFFTRFALNNHMPTHTGERNFKCKVCEKSYPRLKTLKDHMRIHT 81
++H ++C+ C + LN+H+ +H+ ++C C + +LK H+R ++
Sbjct: 9 RNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLRKYS 68
Query: 80 N 78
+
Sbjct: 69 H 69
Score = 29.1 bits (62), Expect = 0.043
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -2
Query: 107 LKDHMRIHTNDRRYRCHICGQAFIQNCSLKGHMKS 3
L+ H+R H + ++C C + + L H+KS
Sbjct: 4 LEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKS 38
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -2
Query: 662 EIRCALCNXVFPYFHALNKHMNEH 591
+ RCA C Y H+L H+ ++
Sbjct: 44 QYRCANCTYATKYCHSLKLHLRKY 67
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 35.5 bits (78), Expect = 5e-04
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -2
Query: 236 YECQCCGQKFFTRFALNNHMPTHTGER--NFKCKVCEKSYPRLKTLKDHMRIHTNDR 72
+ CQ CG+ ++ +L H+ ER ++C +CE+ Y +L H+ + R
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSR 62
Score = 32.7 bits (71), Expect = 0.004
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 407 CPKCDVKLMSYPQKLKHLVEVHGEQPMSFPCTMCDKVCETRRTLTIH 267
C C L S +H+ + H E+ + C +C++V +R +L H
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTH 54
Score = 32.3 bits (70), Expect = 0.005
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -2
Query: 500 FPCESCGKVFKAEYNRDLHVDRVHRKRGRVY-CPKCDVKLMSYPQKLKHLVEVHGEQP 330
F C+ CGKV ++ + HV H +R Y C C+ S + H+ H +P
Sbjct: 6 FTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVYCSRNSLMTHIYTYHKSRP 63
Score = 23.4 bits (48), Expect = 2.1
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 68 YRCHICGQAFIQNCSLKGHM 9
+ C +CG+ SLK H+
Sbjct: 6 FTCQLCGKVLCSKASLKRHV 25
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 32.3 bits (70), Expect = 0.005
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = -2
Query: 407 CPKCDVKLMSYPQKLKHLVEVHGEQPMSFPCTMCDKVCETRRTLTIHWRKDH 252
CP C Y +H + H + + C C++ T+ +LT H H
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQH 59
Score = 29.9 bits (64), Expect = 0.025
Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Frame = -2
Query: 665 EEIRCALCNXVFPYFHALNKHMNEHFSN----YVCETCGLGFVDKGRFVMHQQRHEQGA 501
E C C F +++L +H + YVCE C + K H+ +G+
Sbjct: 4 EPQECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHRGS 62
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 31.5 bits (68), Expect = 0.008
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -2
Query: 236 YECQCCGQKFFTRFALNNHM-PTHTGERNFK-CKVCEKSYPRLKTLKDHMRIH 84
Y C CG+ T+ L H H N C +C K + L +L +H I+
Sbjct: 372 YTCDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNHKSIY 424
Score = 25.0 bits (52), Expect = 0.70
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 653 CALCNXVFPYFHALNKH 603
CALC+ VF ++LN H
Sbjct: 404 CALCHKVFRTLNSLNNH 420
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -2
Query: 68 YRCHICGQAFIQNCSLKGH 12
Y C +CG+ +LK H
Sbjct: 372 YTCDVCGKTLSTKLTLKRH 390
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 27.9 bits (59), Expect = 0.100
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -2
Query: 236 YECQCCGQKFFTRFALNNHMPT-HTG-ERNFKCKVCEKSYPRLKTLKDHMRIH 84
+ C+ C + + L H+ HT + C +C++ Y L +L++H I+
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIY 55
Score = 26.2 bits (55), Expect = 0.30
Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Frame = -2
Query: 407 CPKCDVKLMSYPQKLKHLVEVHGEQPMSFPCTMCDKVCETRRTLTIH---WRKDHLKD 243
C C+ L S + +H+ VH C +C +V + +L H + + H K+
Sbjct: 5 CEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQHSKN 62
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -2
Query: 500 FPCESCGKVFKAEYNRDLHVDRVHRKRGRVYCPKCDV 390
F CE C K+ + H+ VH + + P C++
Sbjct: 3 FRCEPCNKILTSLTRLRRHIQNVHTRPSKE--PICNI 37
Score = 23.0 bits (47), Expect = 2.8
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Frame = -2
Query: 665 EEIRCALCNXVFPYFHALNKHM-NEH---FSNYVCETC-----GLGFVDKGRFVMHQQRH 513
+E RC CN + L +H+ N H +C C L + + + H+Q H
Sbjct: 1 DEFRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNICKRVYSSLNSLRNHKSIYHRQ-H 59
Query: 512 EQGAFPCESCGKVFKAEYNRDLHVDRV 432
+ + ++ + E + H DRV
Sbjct: 60 SKNEQQRKEMEQMREREREQREHSDRV 86
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 419 GRVY-CPKCDVKLMSYPQKLKHLVEVHGE 336
G Y C C + Y Q LKH+++ HGE
Sbjct: 1067 GHFYVCGDCTMAEDVY-QTLKHIIQTHGE 1094
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 506 GAFPCESCGKVFKAEYNRDL 447
G + CE C FK +DL
Sbjct: 123 GVYSCEGCKGFFKRTVRKDL 142
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = -2
Query: 506 GAFPCESCGKVFKAEYNRDL 447
G + CE C FK +DL
Sbjct: 123 GVYSCEGCKGFFKRTVRKDL 142
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 5.0
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +1
Query: 436 RSTCRSRLYSALNTFPQLSQGKAPCSWR 519
R TCR S N P + AP +W+
Sbjct: 372 RLTCRKCFKSRTNLDPSNRKLPAPANWK 399
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.8 bits (44), Expect = 6.6
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = -2
Query: 500 FPCESCGKVFKAEYNRDLHVDRVHRKRGRVY 408
F K+F + ++ + R+HR RG V+
Sbjct: 285 FRTTKSSKMFGSRFDEERLTLRIHRGRGSVH 315
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 161 ERNFKCKVCEKSYPRLKTLK-DHMRIHTNDRRY 66
E N +C V + PR++ LK D H +Y
Sbjct: 418 EANIRCHVAGEPLPRVQWLKNDEALNHDQPDKY 450
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -2
Query: 518 RHEQGAFPCESC 483
+HE G+ CE+C
Sbjct: 271 KHEAGSHSCEAC 282
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = -2
Query: 527 HQQRHEQGAFPCESCGKVFKAEYNRDLHVDRVH 429
H+ R+ SC + EY +D D++H
Sbjct: 239 HEDRNSYRNDGERSCSRDRSREYKKDRRYDQLH 271
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,795
Number of Sequences: 438
Number of extensions: 3858
Number of successful extensions: 58
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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