Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15k07
(285 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071725-1|AAL49347.1| 92|Drosophila melanogaster RH41593p pro... 92 9e-20
AY071189-1|AAL48811.1| 92|Drosophila melanogaster RE23595p pro... 92 9e-20
AE014134-878|AAN10530.1| 92|Drosophila melanogaster CG5827-PB,... 92 9e-20
AE014134-877|AAF52217.1| 92|Drosophila melanogaster CG5827-PA,... 92 9e-20
BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p pro... 31 0.30
AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-P... 29 1.2
AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein... 28 2.1
EF057934-1|ABL84869.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057933-1|ABL84868.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057932-1|ABL84867.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057931-1|ABL84866.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057930-1|ABL84865.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057929-1|ABL84864.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057928-1|ABL84863.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057927-1|ABL84862.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057926-1|ABL84861.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057925-1|ABL84860.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057924-1|ABL84859.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
EF057923-1|ABL84858.1| 668|Drosophila melanogaster Nup75 protein. 27 3.7
BT022831-1|AAY55247.1| 665|Drosophila melanogaster IP13359p pro... 27 3.7
AY070887-1|AAL48509.1| 668|Drosophila melanogaster LD29726p pro... 27 3.7
AE013599-2638|AAF57735.1| 668|Drosophila melanogaster CG5733-PA... 27 3.7
AE013599-2587|AAM68477.1| 750|Drosophila melanogaster CG30325-P... 27 3.7
AY058499-1|AAL13728.1| 1308|Drosophila melanogaster LD15470p pro... 27 4.9
AF146756-1|AAF66735.1| 1226|Drosophila melanogaster transforming... 27 4.9
AF146700-1|AAD30171.1| 1190|Drosophila melanogaster transforming... 27 4.9
AE014297-142|AAN13288.1| 1308|Drosophila melanogaster CG9765-PC,... 27 4.9
AE014297-141|AAO41502.1| 1293|Drosophila melanogaster CG9765-PD,... 27 4.9
AE014297-140|AAN13287.1| 1226|Drosophila melanogaster CG9765-PA,... 27 4.9
AE014297-139|AAF52099.2| 1190|Drosophila melanogaster CG9765-PB,... 27 4.9
X64418-1|CAB55570.1| 1090|Drosophila melanogaster kurz protein p... 26 6.5
BT010244-1|AAQ23562.1| 1192|Drosophila melanogaster RE43077p pro... 26 6.5
AL009195-2|CAA15706.1| 1192|Drosophila melanogaster EG:30B8.2,FB... 26 6.5
AE014298-366|AAF45757.1| 1192|Drosophila melanogaster CG3228-PA ... 26 6.5
Z22228-1|CAA80230.1| 139|Drosophila melanogaster lysozyme precu... 26 8.6
L35153-1|AAA64457.1| 857|Drosophila melanogaster polycomblike n... 26 8.6
AY119049-1|AAM50909.1| 140|Drosophila melanogaster LP06719p pro... 26 8.6
AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p pro... 26 8.6
AE014296-192|AAF47453.1| 140|Drosophila melanogaster CG1165-PA ... 26 8.6
AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA... 26 8.6
>AY071725-1|AAL49347.1| 92|Drosophila melanogaster RH41593p
protein.
Length = 92
Score = 92.3 bits (219), Expect = 9e-20
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -1
Query: 249 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCG 121
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCG
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCG 43
Score = 78.2 bits (184), Expect = 2e-15
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -2
Query: 122 DAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRSAVR 3
D+MKR+ VGIWSCKRCKRTVAGGAWV+STTAA+S RSAVR
Sbjct: 45 DSMKRAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVR 84
>AY071189-1|AAL48811.1| 92|Drosophila melanogaster RE23595p
protein.
Length = 92
Score = 92.3 bits (219), Expect = 9e-20
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -1
Query: 249 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCG 121
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCG
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCG 43
Score = 78.2 bits (184), Expect = 2e-15
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -2
Query: 122 DAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRSAVR 3
D+MKR+ VGIWSCKRCKRTVAGGAWV+STTAA+S RSAVR
Sbjct: 45 DSMKRAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVR 84
>AE014134-878|AAN10530.1| 92|Drosophila melanogaster CG5827-PB,
isoform B protein.
Length = 92
Score = 92.3 bits (219), Expect = 9e-20
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -1
Query: 249 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCG 121
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCG
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCG 43
Score = 78.2 bits (184), Expect = 2e-15
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -2
Query: 122 DAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRSAVR 3
D+MKR+ VGIWSCKRCKRTVAGGAWV+STTAA+S RSAVR
Sbjct: 45 DSMKRAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVR 84
>AE014134-877|AAF52217.1| 92|Drosophila melanogaster CG5827-PA,
isoform A protein.
Length = 92
Score = 92.3 bits (219), Expect = 9e-20
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -1
Query: 249 MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCG 121
MAKRTKKVGI GKYGTRYGASLRKMVKKME+TQH+KYTCSFCG
Sbjct: 1 MAKRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCG 43
Score = 78.2 bits (184), Expect = 2e-15
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -2
Query: 122 DAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRSAVR 3
D+MKR+ VGIWSCKRCKRTVAGGAWV+STTAA+S RSAVR
Sbjct: 45 DSMKRAVVGIWSCKRCKRTVAGGAWVYSTTAAASVRSAVR 84
>BT025932-1|ABG02176.1| 918|Drosophila melanogaster IP13252p
protein.
Length = 918
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2
Query: 149 CWVTSIFLTILRREAP*RVPYLPVIPTFLVRLAILVNLSDTKVDK 283
C V SI LTI R+PY+ +I FL L++L+NL T D+
Sbjct: 543 CVVLSI-LTIALTAIGLRIPYMCMISLFLYILSLLINLLTTLHDR 586
>AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-PA
protein.
Length = 1290
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 216 GKYGTRYGASLRKMVKKMEVTQHAKYTCSFC 124
G YG+ +G S M+ M +H + C +C
Sbjct: 219 GWYGSEFGLSAYGMLMAMSHAEHLPFKCEYC 249
>AJ277094-1|CAB83192.1| 1192|Drosophila melanogaster kurz protein
protein.
Length = 1192
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 25 EAAVVENTQAPPATVLLHRLQDQMPTQERF 114
EAA ENT PPA L + + P RF
Sbjct: 778 EAAKTENTDLPPAVTRLGHVISRFPVAPRF 807
>EF057934-1|ABL84869.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057933-1|ABL84868.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057932-1|ABL84867.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057931-1|ABL84866.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057930-1|ABL84865.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057929-1|ABL84864.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057928-1|ABL84863.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057927-1|ABL84862.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057926-1|ABL84861.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057925-1|ABL84860.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057924-1|ABL84859.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>EF057923-1|ABL84858.1| 668|Drosophila melanogaster Nup75 protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>BT022831-1|AAY55247.1| 665|Drosophila melanogaster IP13359p
protein.
Length = 665
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1
Query: 180 KMVKKMEVTQHAKYTCSFCGC 118
K VKK E +QH K TCS C C
Sbjct: 572 KDVKK-EPSQHFKKTCSLCKC 591
>AY070887-1|AAL48509.1| 668|Drosophila melanogaster LD29726p
protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>AE013599-2638|AAF57735.1| 668|Drosophila melanogaster CG5733-PA
protein.
Length = 668
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 259 VYQNGQTYQKGWNYWQIWH 203
VYQ G QK + W+ WH
Sbjct: 243 VYQEGYALQKFHSQWEFWH 261
>AE013599-2587|AAM68477.1| 750|Drosophila melanogaster CG30325-PA
protein.
Length = 750
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1
Query: 180 KMVKKMEVTQHAKYTCSFCGC 118
K VKK E +QH K TCS C C
Sbjct: 657 KDVKK-EPSQHFKKTCSLCKC 676
>AY058499-1|AAL13728.1| 1308|Drosophila melanogaster LD15470p
protein.
Length = 1308
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 236 PKRLELLANMAHVTVPLYVKWSKRWK*PNTQSILAHFVDAMKRSCVGI 93
PK E N+ + L K +K + PN + + V++M+R C I
Sbjct: 404 PKEPEKALNLKEASSELSTKSAKSLEYPNQEKQFSVAVESMERPCTAI 451
>AF146756-1|AAF66735.1| 1226|Drosophila melanogaster transforming
acidic coiled-coilprotein D-TACC protein.
Length = 1226
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 236 PKRLELLANMAHVTVPLYVKWSKRWK*PNTQSILAHFVDAMKRSCVGI 93
PK E N+ + L K +K + PN + + V++M+R C I
Sbjct: 309 PKEPEKALNLKEASSELSTKSAKSLEYPNQEKQFSVAVESMERPCTAI 356
>AF146700-1|AAD30171.1| 1190|Drosophila melanogaster transforming
acidic coiled-coilcontaining protein protein.
Length = 1190
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 236 PKRLELLANMAHVTVPLYVKWSKRWK*PNTQSILAHFVDAMKRSCVGI 93
PK E N+ + L K +K + PN + + V++M+R C I
Sbjct: 309 PKEPEKALNLKEASSELSTKSAKSLEYPNQEKQFSVAVESMERPCTAI 356
>AE014297-142|AAN13288.1| 1308|Drosophila melanogaster CG9765-PC,
isoform C protein.
Length = 1308
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 236 PKRLELLANMAHVTVPLYVKWSKRWK*PNTQSILAHFVDAMKRSCVGI 93
PK E N+ + L K +K + PN + + V++M+R C I
Sbjct: 404 PKEPEKALNLKEASSELSTKSAKSLEYPNQEKQFSVAVESMERPCTAI 451
>AE014297-141|AAO41502.1| 1293|Drosophila melanogaster CG9765-PD,
isoform D protein.
Length = 1293
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 236 PKRLELLANMAHVTVPLYVKWSKRWK*PNTQSILAHFVDAMKRSCVGI 93
PK E N+ + L K +K + PN + + V++M+R C I
Sbjct: 389 PKEPEKALNLKEASSELSTKSAKSLEYPNQEKQFSVAVESMERPCTAI 436
>AE014297-140|AAN13287.1| 1226|Drosophila melanogaster CG9765-PA,
isoform A protein.
Length = 1226
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 236 PKRLELLANMAHVTVPLYVKWSKRWK*PNTQSILAHFVDAMKRSCVGI 93
PK E N+ + L K +K + PN + + V++M+R C I
Sbjct: 309 PKEPEKALNLKEASSELSTKSAKSLEYPNQEKQFSVAVESMERPCTAI 356
>AE014297-139|AAF52099.2| 1190|Drosophila melanogaster CG9765-PB,
isoform B protein.
Length = 1190
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -2
Query: 236 PKRLELLANMAHVTVPLYVKWSKRWK*PNTQSILAHFVDAMKRSCVGI 93
PK E N+ + L K +K + PN + + V++M+R C I
Sbjct: 309 PKEPEKALNLKEASSELSTKSAKSLEYPNQEKQFSVAVESMERPCTAI 356
>X64418-1|CAB55570.1| 1090|Drosophila melanogaster kurz protein
protein.
Length = 1090
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 25 EAAVVENTQAPPATVLLHRLQDQMPTQERF 114
E A ENT PPA L + + P RF
Sbjct: 689 EVAKTENTDLPPAVTRLGHVISRFPVAPRF 718
>BT010244-1|AAQ23562.1| 1192|Drosophila melanogaster RE43077p
protein.
Length = 1192
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 25 EAAVVENTQAPPATVLLHRLQDQMPTQERF 114
E A ENT PPA L + + P RF
Sbjct: 778 EVAKTENTDLPPAVTRLGHVISRFPVAPRF 807
>AL009195-2|CAA15706.1| 1192|Drosophila melanogaster
EG:30B8.2,FBgn0001330;kz protein.
Length = 1192
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 25 EAAVVENTQAPPATVLLHRLQDQMPTQERF 114
E A ENT PPA L + + P RF
Sbjct: 778 EVAKTENTDLPPAVTRLGHVISRFPVAPRF 807
>AE014298-366|AAF45757.1| 1192|Drosophila melanogaster CG3228-PA
protein.
Length = 1192
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 25 EAAVVENTQAPPATVLLHRLQDQMPTQERF 114
E A ENT PPA L + + P RF
Sbjct: 778 EVAKTENTDLPPAVTRLGHVISRFPVAPRF 807
>Z22228-1|CAA80230.1| 139|Drosophila melanogaster lysozyme
precursor protein.
Length = 139
Score = 25.8 bits (54), Expect = 8.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 235 QKGWNYWQIWH 203
Q+GW+ W +WH
Sbjct: 116 QQGWSAWAVWH 126
>L35153-1|AAA64457.1| 857|Drosophila melanogaster polycomblike
nuclear protein protein.
Length = 857
Score = 25.8 bits (54), Expect = 8.6
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 98 GIWSCKRCKR 69
GIWSCKRC +
Sbjct: 462 GIWSCKRCAK 471
>AY119049-1|AAM50909.1| 140|Drosophila melanogaster LP06719p
protein.
Length = 140
Score = 25.8 bits (54), Expect = 8.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 235 QKGWNYWQIWH 203
Q+GW+ W +WH
Sbjct: 117 QQGWSAWAVWH 127
>AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p
protein.
Length = 1043
Score = 25.8 bits (54), Expect = 8.6
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 98 GIWSCKRCKR 69
GIWSCKRC +
Sbjct: 462 GIWSCKRCAK 471
>AE014296-192|AAF47453.1| 140|Drosophila melanogaster CG1165-PA
protein.
Length = 140
Score = 25.8 bits (54), Expect = 8.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -3
Query: 235 QKGWNYWQIWH 203
Q+GW+ W +WH
Sbjct: 117 QQGWSAWAVWH 127
>AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA
protein.
Length = 1043
Score = 25.8 bits (54), Expect = 8.6
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 98 GIWSCKRCKR 69
GIWSCKRC +
Sbjct: 462 GIWSCKRCAK 471
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,281,285
Number of Sequences: 53049
Number of extensions: 291719
Number of successful extensions: 771
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 465714480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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