Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15k07
(285 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 24 0.32
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 1.3
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 1.3
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 1.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 2.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 3.9
AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced prot... 21 3.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 3.9
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 20 5.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 20 5.2
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 20 6.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 20 6.8
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 20 6.8
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 20 6.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 20 6.8
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 20 6.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 20 6.8
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 19 9.0
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 19 9.0
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 24.2 bits (50), Expect = 0.32
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 167 FLTILRREAP*RVPYLPVIP 226
FL ++ P VPY PVIP
Sbjct: 639 FLVVISSSNPLNVPYGPVIP 658
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.2 bits (45), Expect = 1.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 247 GQTYQKGWNYWQIWHTL 197
G+ W+Y+ I+HTL
Sbjct: 165 GKNITTPWDYYYIYHTL 181
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.2 bits (45), Expect = 1.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 247 GQTYQKGWNYWQIWHTL 197
G+ W+Y+ I+HTL
Sbjct: 180 GKNITTPWDYYYIYHTL 196
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 22.2 bits (45), Expect = 1.3
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 247 GQTYQKGWNYWQIWHTL 197
G+ W+Y+ I+HTL
Sbjct: 68 GKNITTPWDYYYIYHTL 84
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 2.2
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 200 RVPYLPVIPTFLV 238
R+P LP+IP + V
Sbjct: 784 RIPILPMIPVYCV 796
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 3.9
Identities = 7/25 (28%), Positives = 13/25 (52%)
Frame = -2
Query: 260 GLPKWPNVPKRLELLANMAHVTVPL 186
G+P PN+P + + M + P+
Sbjct: 428 GMPPLPNMPGSMPTMPTMPSMAGPI 452
>AB264333-1|BAF44088.1| 36|Apis mellifera ecdysone-induced protein
75 protein.
Length = 36
Score = 20.6 bits (41), Expect = 3.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = +1
Query: 70 LLHRLQDQMPTQERFIASTK 129
L H L MPT + ++S K
Sbjct: 10 LPHHLSPNMPTMDSTVSSAK 29
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 3.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 172 DHFT*RGTVTCAIFASNSNLFGTFGHFGK 258
D+F V A+FA S+ + F FG+
Sbjct: 596 DNFGPLSNVRFAVFALGSSAYPNFCAFGR 624
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 20.2 bits (40), Expect = 5.2
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3
Query: 280 VNFCIGEVYQNGQT 239
VN+ +G +QNG T
Sbjct: 167 VNYTLGHHHQNGAT 180
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 20.2 bits (40), Expect = 5.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +3
Query: 78 SLTRPDADTRTFHSIHK 128
+ TRP T TFH I K
Sbjct: 334 TFTRPCGITLTFHEILK 350
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 148 RKVYLLILWML*NVLVSASGLVS 80
+K LI W + V+ + +G+VS
Sbjct: 208 KKTPFLISWGIAQVVTTVAGIVS 230
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 19.8 bits (39), Expect = 6.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 150 HAKYTCSFCG 121
H +YTC CG
Sbjct: 480 HDEYTCMDCG 489
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 19.8 bits (39), Expect = 6.8
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -2
Query: 152 NTQSILAHFVD---AMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRS 12
N +LA + D A +C GI S + + + WV + ++ RS
Sbjct: 97 NGGPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRLWVLDSGLINNVRS 146
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 6.8
Identities = 5/9 (55%), Positives = 5/9 (55%)
Frame = -3
Query: 232 KGWNYWQIW 206
K WN W W
Sbjct: 694 KSWNKWNDW 702
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 6.8
Identities = 5/9 (55%), Positives = 5/9 (55%)
Frame = -3
Query: 232 KGWNYWQIW 206
K WN W W
Sbjct: 694 KSWNKWNDW 702
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 19.8 bits (39), Expect = 6.8
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -3
Query: 148 RKVYLLILWML*NVLVSASGLVS 80
+K LI W + V+ + +G+VS
Sbjct: 208 KKTPFLISWGIAQVVTTVAGIVS 230
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.8 bits (39), Expect = 6.8
Identities = 5/9 (55%), Positives = 5/9 (55%)
Frame = -3
Query: 232 KGWNYWQIW 206
K WN W W
Sbjct: 694 KSWNKWNDW 702
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 19.4 bits (38), Expect = 9.0
Identities = 9/29 (31%), Positives = 11/29 (37%)
Frame = -1
Query: 207 GTRYGASLRKMVKKMEVTQHAKYTCSFCG 121
G + S + V T YTC CG
Sbjct: 210 GKGFTCSKQLKVHTRTHTGEKPYTCDICG 238
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 19.4 bits (38), Expect = 9.0
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 7 TADLHDEAAVVENTQAPP 60
T D HDE A +PP
Sbjct: 183 TPDPHDETAKKPRVLSPP 200
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,076
Number of Sequences: 438
Number of extensions: 2085
Number of successful extensions: 19
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 5619645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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