Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15j10
(676 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M36661-1|AAA61256.1| 468|Homo sapiens UMPS protein. 38 0.033
J03626-1|AAA61255.1| 480|Homo sapiens UMPS protein. 38 0.033
D86230-1|BAA19923.1| 480|Homo sapiens UMP synthase protein. 38 0.033
D86228-1|BAA19921.1| 480|Homo sapiens UMP synthase protein. 38 0.033
D86227-1|BAA19920.1| 480|Homo sapiens UMP synthase protein. 38 0.033
CR456787-1|CAG33068.1| 480|Homo sapiens UMPS protein. 38 0.033
BC007511-1|AAH07511.1| 480|Homo sapiens uridine monophosphate s... 38 0.033
BC000364-1|AAH00364.1| 480|Homo sapiens uridine monophosphate s... 38 0.033
AY691629-1|AAT85801.1| 480|Homo sapiens uridine monophosphate s... 38 0.033
AB062285-1|BAB93468.1| 480|Homo sapiens uridine monophosphate s... 38 0.033
AB041359-1|BAB20663.1| 480|Homo sapiens UMP synthase protein. 38 0.033
AF288687-1|AAG01173.1| 1086|Homo sapiens CGI-152 protein protein. 30 8.6
AB058728-1|BAB47454.1| 1203|Homo sapiens KIAA1825 protein protein. 30 8.6
>M36661-1|AAA61256.1| 468|Homo sapiens UMPS protein.
Length = 468
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 431 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 466
>J03626-1|AAA61255.1| 480|Homo sapiens UMPS protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>D86230-1|BAA19923.1| 480|Homo sapiens UMP synthase protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>D86228-1|BAA19921.1| 480|Homo sapiens UMP synthase protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>D86227-1|BAA19920.1| 480|Homo sapiens UMP synthase protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>CR456787-1|CAG33068.1| 480|Homo sapiens UMPS protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>BC007511-1|AAH07511.1| 480|Homo sapiens uridine monophosphate
synthetase (orotate phosphoribosyl transferase and
orotid protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>BC000364-1|AAH00364.1| 480|Homo sapiens uridine monophosphate
synthetase (orotate phosphoribosyl transferase and
orotid protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>AY691629-1|AAT85801.1| 480|Homo sapiens uridine monophosphate
synthetase (orotate phosphoribosyl transferase and
orotid protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>AB062285-1|BAB93468.1| 480|Homo sapiens uridine monophosphate
synthetase protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>AB041359-1|BAB20663.1| 480|Homo sapiens UMP synthase protein.
Length = 480
Score = 37.9 bits (84), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -3
Query: 671 GADVIVVGRGITAAKNPEVQAVAYKDALWKCYIKRI 564
G+D+I+VGRGI +A + A Y+ A W+ Y+ R+
Sbjct: 443 GSDIIIVGRGIISAADRLEAAEMYRKAAWEAYLSRL 478
>AF288687-1|AAG01173.1| 1086|Homo sapiens CGI-152 protein protein.
Length = 1086
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 383 KFGMLVLDPIMEDFNSAFKKHIVSGYFVSQI*FLQYWHLGNY 508
KFG + ++ DF+ FK+ + +FV Q+ + W L Y
Sbjct: 103 KFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEY 144
>AB058728-1|BAB47454.1| 1203|Homo sapiens KIAA1825 protein protein.
Length = 1203
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 383 KFGMLVLDPIMEDFNSAFKKHIVSGYFVSQI*FLQYWHLGNY 508
KFG + ++ DF+ FK+ + +FV Q+ + W L Y
Sbjct: 220 KFGSNKAEMVVPDFSELFKERATAPFFVFQVFCVGLWCLDEY 261
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,061,282
Number of Sequences: 237096
Number of extensions: 1517882
Number of successful extensions: 2414
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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