Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15j07
(669 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY119628-1|AAM50282.1| 826|Drosophila melanogaster RE19835p pro... 30 2.5
AE014298-2591|AAF48747.2| 826|Drosophila melanogaster CG5800-PA... 30 2.5
AY061181-1|AAL28729.1| 158|Drosophila melanogaster LD14807p pro... 30 3.3
AF132165-1|AAD34753.1| 737|Drosophila melanogaster unknown prot... 29 7.6
AF017777-4|AAC28403.1| 737|Drosophila melanogaster penguin prot... 29 7.6
AE014298-3120|AAF50828.1| 737|Drosophila melanogaster CG1685-PA... 29 7.6
U30470-1|AAA74264.1| 268|Drosophila melanogaster SET protein. 28 10.0
AY118922-1|AAM50782.1| 269|Drosophila melanogaster LD23703p pro... 28 10.0
AM294390-1|CAL26320.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294389-1|CAL26319.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294388-1|CAL26318.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294387-1|CAL26317.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294386-1|CAL26316.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294385-1|CAL26315.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294384-1|CAL26314.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294383-1|CAL26313.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294382-1|CAL26312.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AM294381-1|CAL26311.1| 269|Drosophila melanogaster CG4299 protein. 28 10.0
AE014297-1979|AAF55155.1| 269|Drosophila melanogaster CG4299-PA... 28 10.0
>AY119628-1|AAM50282.1| 826|Drosophila melanogaster RE19835p
protein.
Length = 826
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGEPKGKKAKMS 581
D+E+ DDS D+D + EP KK+K++
Sbjct: 781 DDEKADDSDGDDDDVSDDEPAYKKSKLT 808
>AE014298-2591|AAF48747.2| 826|Drosophila melanogaster CG5800-PA
protein.
Length = 826
Score = 30.3 bits (65), Expect = 2.5
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGEPKGKKAKMS 581
D+E+ DDS D+D + EP KK+K++
Sbjct: 781 DDEKADDSDGDDDDVSDDEPAYKKSKLT 808
>AY061181-1|AAL28729.1| 158|Drosophila melanogaster LD14807p
protein.
Length = 158
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 642 LSSRMKIMKKVNPRAKKRKCRIMPKAKLHRPRRMPRNEQTA 520
L R ++ PR K+R R+ P+ + HRP+R +TA
Sbjct: 56 LLPRRQLPAMTAPRKKRRPRRLPPQQRRHRPKRPSLQAKTA 96
>AF132165-1|AAD34753.1| 737|Drosophila melanogaster unknown
protein.
Length = 737
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 661 EEEGDDSQFKDEDNEEGEPKGKKAK 587
++EGD+ + K+ ++ EPK KKAK
Sbjct: 595 DDEGDEKEQKEAAADDAEPKVKKAK 619
>AF017777-4|AAC28403.1| 737|Drosophila melanogaster penguin
protein.
Length = 737
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 661 EEEGDDSQFKDEDNEEGEPKGKKAK 587
++EGD+ + K+ ++ EPK KKAK
Sbjct: 595 DDEGDEKEQKEAAADDAEPKVKKAK 619
>AE014298-3120|AAF50828.1| 737|Drosophila melanogaster CG1685-PA
protein.
Length = 737
Score = 28.7 bits (61), Expect = 7.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -3
Query: 661 EEEGDDSQFKDEDNEEGEPKGKKAK 587
++EGD+ + K+ ++ EPK KKAK
Sbjct: 595 DDEGDEKEQKEAAADDAEPKVKKAK 619
>U30470-1|AAA74264.1| 268|Drosophila melanogaster SET protein.
Length = 268
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 239 DNEDNDEEAFDDEDGEDGE 257
>AY118922-1|AAM50782.1| 269|Drosophila melanogaster LD23703p
protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294390-1|CAL26320.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294389-1|CAL26319.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294388-1|CAL26318.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294387-1|CAL26317.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294386-1|CAL26316.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294385-1|CAL26315.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294384-1|CAL26314.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294383-1|CAL26313.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294382-1|CAL26312.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AM294381-1|CAL26311.1| 269|Drosophila melanogaster CG4299 protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
>AE014297-1979|AAF55155.1| 269|Drosophila melanogaster CG4299-PA
protein.
Length = 269
Score = 28.3 bits (60), Expect = 10.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 664 DEEEGDDSQFKDEDNEEGE 608
D E+ D+ F DED E+GE
Sbjct: 240 DNEDNDEEAFDDEDGEDGE 258
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,419,114
Number of Sequences: 53049
Number of extensions: 483349
Number of successful extensions: 2023
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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