Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15j04
(470 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-301|AAX52653.1| 386|Drosophila melanogaster CG31931-PA... 32 0.45
AE014296-1323|AAN12020.1| 294|Drosophila melanogaster CG32371-P... 31 0.79
AY070709-1|AAL48180.1| 652|Drosophila melanogaster SD02261p pro... 31 1.0
AE014296-3203|AAF49118.1| 652|Drosophila melanogaster CG8743-PA... 31 1.0
BT014672-1|AAT27296.1| 294|Drosophila melanogaster AT13084p pro... 30 1.4
S65627-1|AAB28337.1| 285|Drosophila melanogaster cAMP-regulated... 28 5.5
BT028845-1|ABI34226.2| 331|Drosophila melanogaster RT01111p pro... 28 5.5
BT028814-1|ABI34195.2| 331|Drosophila melanogaster RT01011p pro... 28 5.5
BT028813-1|ABI34194.2| 285|Drosophila melanogaster RT01009p pro... 28 5.5
AE014298-2705|AAS65403.1| 281|Drosophila melanogaster CG6103-PG... 28 5.5
AE014298-2704|AAN09464.2| 285|Drosophila melanogaster CG6103-PF... 28 5.5
AE014298-2703|AAS65402.1| 331|Drosophila melanogaster CG6103-PD... 28 5.5
AE014298-2702|AAF48827.1| 359|Drosophila melanogaster CG6103-PE... 28 5.5
BT011033-1|AAR30193.1| 755|Drosophila melanogaster RE44811p pro... 27 9.7
AY075543-1|AAL68350.1| 159|Drosophila melanogaster RH34376p pro... 27 9.7
AE014134-3303|AAF53934.3| 159|Drosophila melanogaster CG31676-P... 27 9.7
AE014134-818|AAF52182.2| 755|Drosophila melanogaster CG3753-PA ... 27 9.7
>AE014134-301|AAX52653.1| 386|Drosophila melanogaster CG31931-PA
protein.
Length = 386
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 190 FVPSLLSDVWNVWLLIVACSVTSAACQ*TA 279
F SLL ++W+ WL I AC +T A TA
Sbjct: 288 FPNSLLINIWDFWLCIAACDLTEKAGDETA 317
>AE014296-1323|AAN12020.1| 294|Drosophila melanogaster CG32371-PA
protein.
Length = 294
Score = 31.1 bits (67), Expect = 0.79
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 317 AARVDLAHTEDPGAVH*QAAEVTEHATINSQTFHTSDSSEGT-KRFRRLPSFGFRLLQNR 141
+A+ DLA TE VH + TE A+ ++ T SEG+ + R + R+ Q R
Sbjct: 199 SAQTDLAITEPENQVHESQTKTTEKASAQTEKATTEPDSEGSIEELRNYCKYVSRMKQER 258
>AY070709-1|AAL48180.1| 652|Drosophila melanogaster SD02261p
protein.
Length = 652
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 192 RSFATVG-CVECLAVNSSVFCNFGGLSMNGSWIFCMCEVY 308
RS AT C+ L +F F LS +W++ C++Y
Sbjct: 510 RSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIY 549
>AE014296-3203|AAF49118.1| 652|Drosophila melanogaster CG8743-PA
protein.
Length = 652
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 192 RSFATVG-CVECLAVNSSVFCNFGGLSMNGSWIFCMCEVY 308
RS AT C+ L +F F LS +W++ C++Y
Sbjct: 510 RSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIY 549
>BT014672-1|AAT27296.1| 294|Drosophila melanogaster AT13084p
protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -1
Query: 317 AARVDLAHTEDPGAVH*QAAEVTEHATINSQTFHTSDSSEGT-KRFRRLPSFGFRLLQNR 141
+A+ D+A TE VH + TE A+ ++ T SEG+ + R + R+ Q R
Sbjct: 199 SAQTDMAITEPENQVHESQTKTTEKASAQTEKATTEPDSEGSIEELRNYCKYVSRMKQER 258
>S65627-1|AAB28337.1| 285|Drosophila melanogaster cAMP-regulated
enhancer-bindingprotein protein.
Length = 285
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 20 CTRKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCR 139
C RKKK ++ + L ++V L+N NK + EL L C+
Sbjct: 243 CRRKKK-EYIKCLENRVAVLENQNKALIEELKSLKELYCQ 281
>BT028845-1|ABI34226.2| 331|Drosophila melanogaster RT01111p
protein.
Length = 331
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 20 CTRKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCR 139
C RKKK ++ + L ++V L+N NK + EL L C+
Sbjct: 289 CRRKKK-EYIKCLENRVAVLENQNKALIEELKSLKELYCQ 327
>BT028814-1|ABI34195.2| 331|Drosophila melanogaster RT01011p
protein.
Length = 331
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 20 CTRKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCR 139
C RKKK ++ + L ++V L+N NK + EL L C+
Sbjct: 289 CRRKKK-EYIKCLENRVAVLENQNKALIEELKSLKELYCQ 327
>BT028813-1|ABI34194.2| 285|Drosophila melanogaster RT01009p
protein.
Length = 285
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 20 CTRKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCR 139
C RKKK ++ + L ++V L+N NK + EL L C+
Sbjct: 243 CRRKKK-EYIKCLENRVAVLENQNKALIEELKSLKELYCQ 281
>AE014298-2705|AAS65403.1| 281|Drosophila melanogaster CG6103-PG,
isoform G protein.
Length = 281
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 20 CTRKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCR 139
C RKKK ++ + L ++V L+N NK + EL L C+
Sbjct: 239 CRRKKK-EYIKCLENRVAVLENQNKALIEELKSLKELYCQ 277
>AE014298-2704|AAN09464.2| 285|Drosophila melanogaster CG6103-PF,
isoform F protein.
Length = 285
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 20 CTRKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCR 139
C RKKK ++ + L ++V L+N NK + EL L C+
Sbjct: 243 CRRKKK-EYIKCLENRVAVLENQNKALIEELKSLKELYCQ 281
>AE014298-2703|AAS65402.1| 331|Drosophila melanogaster CG6103-PD,
isoform D protein.
Length = 331
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 20 CTRKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCR 139
C RKKK ++ + L ++V L+N NK + EL L C+
Sbjct: 289 CRRKKK-EYIKCLENRVAVLENQNKALIEELKSLKELYCQ 327
>AE014298-2702|AAF48827.1| 359|Drosophila melanogaster CG6103-PE,
isoform E protein.
Length = 359
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 20 CTRKKKIKHRQILNDKVIYLQNSNKNKLFELSGLSLKSCR 139
C RKKK ++ + L ++V L+N NK + EL L C+
Sbjct: 317 CRRKKK-EYIKCLENRVAVLENQNKALIEELKSLKELYCQ 355
>BT011033-1|AAR30193.1| 755|Drosophila melanogaster RE44811p
protein.
Length = 755
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 222 IPHIRQ*RRNEAISSPALVWLSTVTKSCLQDF 127
+P + + R + PALVW + TK L F
Sbjct: 462 LPQLAEKNRETVVLDPALVWTNAETKETLDAF 493
>AY075543-1|AAL68350.1| 159|Drosophila melanogaster RH34376p
protein.
Length = 159
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 128 KSCRHDFVTVESQTRAGDEIASFLR--YCRMCGMSGC 232
+SC ++ + + A D+ +S+++ YCR C GC
Sbjct: 93 RSCFYEDMDDSADKCANDQTSSYIKTVYCRTCTTDGC 129
>AE014134-3303|AAF53934.3| 159|Drosophila melanogaster CG31676-PA
protein.
Length = 159
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 128 KSCRHDFVTVESQTRAGDEIASFLR--YCRMCGMSGC 232
+SC ++ + + A D+ +S+++ YCR C GC
Sbjct: 93 RSCFYEDMDDSADKCANDQTSSYIKTVYCRTCTTDGC 129
>AE014134-818|AAF52182.2| 755|Drosophila melanogaster CG3753-PA
protein.
Length = 755
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 222 IPHIRQ*RRNEAISSPALVWLSTVTKSCLQDF 127
+P + + R + PALVW + TK L F
Sbjct: 462 LPQLAEKNRETVVLDPALVWTNAETKETLDAF 493
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,852,776
Number of Sequences: 53049
Number of extensions: 395251
Number of successful extensions: 973
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 972
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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