Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15i11
(689 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070974-1|AAL48596.1| 336|Drosophila melanogaster RE07422p pro... 231 7e-61
AY113636-1|AAM29641.1| 336|Drosophila melanogaster RH73327p pro... 231 9e-61
AE013599-448|AAF59231.1| 336|Drosophila melanogaster CG1598-PA ... 231 9e-61
BT001458-1|AAN71213.1| 119|Drosophila melanogaster GM18141p pro... 79 4e-15
BT029977-1|ABM92851.1| 483|Drosophila melanogaster IP18248p pro... 33 0.37
BT029973-1|ABM92847.1| 513|Drosophila melanogaster IP18148p pro... 33 0.37
AY118408-1|AAM48437.1| 1005|Drosophila melanogaster RE63030p pro... 33 0.37
AE014296-1428|AAF50437.2| 1005|Drosophila melanogaster CG7112-PA... 33 0.37
U49439-1|AAB01100.1| 2210|Drosophila melanogaster ASH1 protein. 30 3.4
BT016048-1|AAV36933.1| 407|Drosophila melanogaster LP19671p pro... 30 3.4
AE014297-3544|AAF56295.1| 479|Drosophila melanogaster CG17782-P... 30 3.4
AE014296-3176|AAF49140.2| 2217|Drosophila melanogaster CG8887-PA... 30 3.4
AJ250870-3|CAC17710.1| 394|Drosophila melanogaster chromatin co... 29 7.9
AJ250867-1|CAC17705.1| 394|Drosophila melanogaster chromatin co... 29 7.9
>AY070974-1|AAL48596.1| 336|Drosophila melanogaster RE07422p
protein.
Length = 336
Score = 231 bits (565), Expect = 7e-61
Identities = 108/158 (68%), Positives = 129/158 (81%), Gaps = 2/158 (1%)
Frame = -3
Query: 687 GKADALESKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCV 508
GK L+ KVAP ++Q S+ G+AD N+D S K+D+ML VI QVN QFK+P+QTTFVCV
Sbjct: 173 GKLLRLKMKVAPLLSQFVSMLGMADVNADTLSQKLDDMLRVITQVNEQFKNPDQTTFVCV 232
Query: 507 CIAEFLSLYETERLVQELTRCGIDTHNIIVNQLLL--RSSAPCELCAARHKVQEKYLEQI 334
CIAEF SLYETERLVQELT+CGID HNIIVNQLL S C +CA+R K+QEKYL+QI
Sbjct: 233 CIAEFFSLYETERLVQELTKCGIDVHNIIVNQLLFLQNSHDSCSMCASRFKIQEKYLDQI 292
Query: 333 ADLYEDFHVTKLPLLEKEVRGASAVNAFSELLLKPYDP 220
ADLYEDFHVTKLPLLEKEVRG ++++FSE L+KPY+P
Sbjct: 293 ADLYEDFHVTKLPLLEKEVRGPESISSFSENLMKPYNP 330
>AY113636-1|AAM29641.1| 336|Drosophila melanogaster RH73327p
protein.
Length = 336
Score = 231 bits (564), Expect = 9e-61
Identities = 108/158 (68%), Positives = 128/158 (81%), Gaps = 2/158 (1%)
Frame = -3
Query: 687 GKADALESKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCV 508
GK L+ KVAP ++Q S+ G+AD N+D S K+D+ML VI QVN QFK+P+QTTFVCV
Sbjct: 173 GKLLRLKMKVAPLLSQFVSMLGMADVNADTLSQKLDDMLRVITQVNEQFKNPDQTTFVCV 232
Query: 507 CIAEFLSLYETERLVQELTRCGIDTHNIIVNQLLL--RSSAPCELCAARHKVQEKYLEQI 334
CIAEF SLYETERLVQELT+CGID HNIIVNQLL S C +CA+R K+QEKYL+QI
Sbjct: 233 CIAEFFSLYETERLVQELTKCGIDVHNIIVNQLLFLQNSHDSCSMCASRFKIQEKYLDQI 292
Query: 333 ADLYEDFHVTKLPLLEKEVRGASAVNAFSELLLKPYDP 220
ADLYEDFHVTKLPLLEKEVRG ++ +FSE L+KPY+P
Sbjct: 293 ADLYEDFHVTKLPLLEKEVRGPESIRSFSENLMKPYNP 330
>AE013599-448|AAF59231.1| 336|Drosophila melanogaster CG1598-PA
protein.
Length = 336
Score = 231 bits (564), Expect = 9e-61
Identities = 108/158 (68%), Positives = 128/158 (81%), Gaps = 2/158 (1%)
Frame = -3
Query: 687 GKADALESKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCV 508
GK L+ KVAP ++Q S+ G+AD N+D S K+D+ML VI QVN QFK+P+QTTFVCV
Sbjct: 173 GKLLRLKMKVAPLLSQFVSMLGMADVNADTLSQKLDDMLRVITQVNEQFKNPDQTTFVCV 232
Query: 507 CIAEFLSLYETERLVQELTRCGIDTHNIIVNQLLL--RSSAPCELCAARHKVQEKYLEQI 334
CIAEF SLYETERLVQELT+CGID HNIIVNQLL S C +CA+R K+QEKYL+QI
Sbjct: 233 CIAEFFSLYETERLVQELTKCGIDVHNIIVNQLLFLQNSHDSCSMCASRFKIQEKYLDQI 292
Query: 333 ADLYEDFHVTKLPLLEKEVRGASAVNAFSELLLKPYDP 220
ADLYEDFHVTKLPLLEKEVRG ++ +FSE L+KPY+P
Sbjct: 293 ADLYEDFHVTKLPLLEKEVRGPESIRSFSENLMKPYNP 330
>BT001458-1|AAN71213.1| 119|Drosophila melanogaster GM18141p
protein.
Length = 119
Score = 79.4 bits (187), Expect = 4e-15
Identities = 34/45 (75%), Positives = 41/45 (91%)
Frame = -3
Query: 354 EKYLEQIADLYEDFHVTKLPLLEKEVRGASAVNAFSELLLKPYDP 220
+KYL+QIADLYEDFHVTKLPLLEKEVRG ++ +FSE L+KPY+P
Sbjct: 69 QKYLDQIADLYEDFHVTKLPLLEKEVRGPESIRSFSENLMKPYNP 113
>BT029977-1|ABM92851.1| 483|Drosophila melanogaster IP18248p
protein.
Length = 483
Score = 33.1 bits (72), Expect = 0.37
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = -3
Query: 495 FLSLYETERLVQE--------LTRCGIDTHNIIVNQLLLRSSAPCELCAARHKVQEKYLE 340
+L LY+ ERL+++ T CGI+TH L +A LC H + L+
Sbjct: 68 YLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLD 127
Query: 339 QIADLYEDFHVTKLPLLEKEVR 274
+ L++ VT L + E ++R
Sbjct: 128 GLPVLFQ-VAVTLLSICESDLR 148
>BT029973-1|ABM92847.1| 513|Drosophila melanogaster IP18148p
protein.
Length = 513
Score = 33.1 bits (72), Expect = 0.37
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = -3
Query: 495 FLSLYETERLVQE--------LTRCGIDTHNIIVNQLLLRSSAPCELCAARHKVQEKYLE 340
+L LY+ ERL+++ T CGI+TH L +A LC H + L+
Sbjct: 98 YLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLD 157
Query: 339 QIADLYEDFHVTKLPLLEKEVR 274
+ L++ VT L + E ++R
Sbjct: 158 GLPVLFQ-VAVTLLSICESDLR 178
>AY118408-1|AAM48437.1| 1005|Drosophila melanogaster RE63030p
protein.
Length = 1005
Score = 33.1 bits (72), Expect = 0.37
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = -3
Query: 495 FLSLYETERLVQE--------LTRCGIDTHNIIVNQLLLRSSAPCELCAARHKVQEKYLE 340
+L LY+ ERL+++ T CGI+TH L +A LC H + L+
Sbjct: 643 YLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLD 702
Query: 339 QIADLYEDFHVTKLPLLEKEVR 274
+ L++ VT L + E ++R
Sbjct: 703 GLPVLFQ-VAVTLLSICESDLR 723
>AE014296-1428|AAF50437.2| 1005|Drosophila melanogaster CG7112-PA
protein.
Length = 1005
Score = 33.1 bits (72), Expect = 0.37
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Frame = -3
Query: 495 FLSLYETERLVQE--------LTRCGIDTHNIIVNQLLLRSSAPCELCAARHKVQEKYLE 340
+L LY+ ERL+++ T CGI+TH L +A LC H + L+
Sbjct: 643 YLRLYQLERLIKDQLPKLHEHFTACGIETHMYASQWFLTLYTARFPLCFVFHVLDVFLLD 702
Query: 339 QIADLYEDFHVTKLPLLEKEVR 274
+ L++ VT L + E ++R
Sbjct: 703 GLPVLFQ-VAVTLLSICESDLR 723
>U49439-1|AAB01100.1| 2210|Drosophila melanogaster ASH1 protein.
Length = 2210
Score = 29.9 bits (64), Expect = 3.4
Identities = 22/101 (21%), Positives = 45/101 (44%)
Frame = -3
Query: 534 PNQTTFVCVCIAEFLSLYETERLVQELTRCGIDTHNIIVNQLLLRSSAPCELCAARHKVQ 355
P++ C+C LY+ E L+ + ++C + H + + CE C R +
Sbjct: 1837 PDEDVIRCIC-----GLYKDEGLMIQCSKCMVWQHTECTKADIDADNYQCERCEPREVDR 1891
Query: 354 EKYLEQIADLYEDFHVTKLPLLEKEVRGASAVNAFSELLLK 232
E LE+ + ++++ L + +VR AV ++ +K
Sbjct: 1892 EIPLEEFTEEGHRYYLS-LMRGDLQVRQGDAVYVLRDIPIK 1931
>BT016048-1|AAV36933.1| 407|Drosophila melanogaster LP19671p
protein.
Length = 407
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 239 RSSENAFTAEAPRTSFSSKGSFVTWKSSYKSAICSRYFSWTL 364
R +N + P S SS F W Y A SRY W L
Sbjct: 173 RRKDNHYYYSRPGVSSSSSNPFAKWTRPYSHAQNSRYPYWAL 214
>AE014297-3544|AAF56295.1| 479|Drosophila melanogaster CG17782-PA
protein.
Length = 479
Score = 29.9 bits (64), Expect = 3.4
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 239 RSSENAFTAEAPRTSFSSKGSFVTWKSSYKSAICSRYFSWTL 364
R +N + P S SS F W Y A SRY W L
Sbjct: 245 RRKDNHYYYSRPGVSSSSSNPFAKWTRPYSHAQNSRYPYWAL 286
>AE014296-3176|AAF49140.2| 2217|Drosophila melanogaster CG8887-PA
protein.
Length = 2217
Score = 29.9 bits (64), Expect = 3.4
Identities = 22/101 (21%), Positives = 45/101 (44%)
Frame = -3
Query: 534 PNQTTFVCVCIAEFLSLYETERLVQELTRCGIDTHNIIVNQLLLRSSAPCELCAARHKVQ 355
P++ C+C LY+ E L+ + ++C + H + + CE C R +
Sbjct: 1844 PDEDVIRCIC-----GLYKDEGLMIQCSKCMVWQHTECTKADIDADNYQCERCEPREVDR 1898
Query: 354 EKYLEQIADLYEDFHVTKLPLLEKEVRGASAVNAFSELLLK 232
E LE+ + ++++ L + +VR AV ++ +K
Sbjct: 1899 EIPLEEFTEEGHRYYLS-LMRGDLQVRQGDAVYVLRDIPIK 1938
>AJ250870-3|CAC17710.1| 394|Drosophila melanogaster chromatin
component KLETT protein.
Length = 394
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 631 TVWTSRFQLGHVQQQNG*DVISYQT--SECTVQRPESNYICV 512
T WTS Q +VQ+Q V Y T S VQ P+ ++ V
Sbjct: 13 THWTSPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAV 54
>AJ250867-1|CAC17705.1| 394|Drosophila melanogaster chromatin
component KLETT protein.
Length = 394
Score = 28.7 bits (61), Expect = 7.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 631 TVWTSRFQLGHVQQQNG*DVISYQT--SECTVQRPESNYICV 512
T WTS Q +VQ+Q V Y T S VQ P+ ++ V
Sbjct: 13 THWTSPLQAANVQEQQSSPVALYPTSASPVAVQSPQDAFLAV 54
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,046,300
Number of Sequences: 53049
Number of extensions: 646277
Number of successful extensions: 1522
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3005453946
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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