Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15i05
         (596 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U36221-1|AAB19240.1|  530|Homo sapiens pancreatic zymogen granul...    29   9.5  
D38225-1|BAA07400.1|  384|Homo sapiens pancreatic GP2 protein.         29   9.5  
BC032693-1|AAH32693.2|  383|Homo sapiens glycoprotein 2 (zymogen...    29   9.5  
AB035542-1|BAA88167.1|  380|Homo sapiens pancreatic zymogen gran...    29   9.5  
AB035541-1|BAA88166.1|  527|Homo sapiens pancreatic zymogen gran...    29   9.5  

>U36221-1|AAB19240.1|  530|Homo sapiens pancreatic zymogen granule
           membrane protein GP-2 protein.
          Length = 530

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 440 VYMYTFKFVQNFILQDAHMRINELEAPPLNFYVSAQSRRRLFIEPVTVR-DGS 595
           +Y  T   V +FI++D  + IN   A PL+  VS Q+  +  +  + V  DG+
Sbjct: 289 IYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQPIVSSLNVSVDGN 341


>D38225-1|BAA07400.1|  384|Homo sapiens pancreatic GP2 protein.
          Length = 384

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 440 VYMYTFKFVQNFILQDAHMRINELEAPPLNFYVSAQSRRRLFIEPVTVR-DGS 595
           +Y  T   V +FI++D  + IN   A PL+  VS Q+  +  +  + V  DG+
Sbjct: 143 IYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQPIVSSLNVSVDGN 195


>BC032693-1|AAH32693.2|  383|Homo sapiens glycoprotein 2 (zymogen
           granule membrane) protein.
          Length = 383

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 440 VYMYTFKFVQNFILQDAHMRINELEAPPLNFYVSAQSRRRLFIEPVTVR-DGS 595
           +Y  T   V +FI++D  + IN   A PL+  VS Q+  +  +  + V  DG+
Sbjct: 142 IYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQPIVSSLNVSVDGN 194


>AB035542-1|BAA88167.1|  380|Homo sapiens pancreatic zymogen granule
           membrane associated protein GP2 beta form protein.
          Length = 380

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 440 VYMYTFKFVQNFILQDAHMRINELEAPPLNFYVSAQSRRRLFIEPVTVR-DGS 595
           +Y  T   V +FI++D  + IN   A PL+  VS Q+  +  +  + V  DG+
Sbjct: 139 IYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQPIVSSLNVSVDGN 191


>AB035541-1|BAA88166.1|  527|Homo sapiens pancreatic zymogen granule
           membrane associated protein GP2 alpha form protein.
          Length = 527

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 440 VYMYTFKFVQNFILQDAHMRINELEAPPLNFYVSAQSRRRLFIEPVTVR-DGS 595
           +Y  T   V +FI++D  + IN   A PL+  VS Q+  +  +  + V  DG+
Sbjct: 286 IYKNTLSLVNDFIIRDTILNINFQCAYPLDMKVSLQAALQPIVSSLNVSVDGN 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,449,179
Number of Sequences: 237096
Number of extensions: 1815961
Number of successful extensions: 2631
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2631
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)