Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15i03
(354 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein. 113 1e-25
BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25 p... 113 1e-25
BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25 p... 113 1e-25
BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25 p... 113 1e-25
AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25 p... 113 1e-25
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 33 0.25
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 33 0.25
AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens ... 31 1.3
BC028615-1|AAH28615.1| 408|Homo sapiens solute carrier family 3... 29 4.1
Z95326-1|CAI20271.2| 408|Homo sapiens solute carrier family 35,... 29 5.4
BX640761-1|CAE45867.1| 228|Homo sapiens hypothetical protein pr... 29 5.4
BC114925-1|AAI14926.1| 408|Homo sapiens SLC35F1 protein protein. 29 5.4
BC110844-1|AAI10845.1| 201|Homo sapiens DLG2 protein protein. 29 5.4
BC104969-1|AAI04970.1| 202|Homo sapiens DLG2 protein protein. 29 5.4
AL449196-1|CAI16177.2| 408|Homo sapiens solute carrier family 3... 29 5.4
AL136478-1|CAM28261.1| 408|Homo sapiens solute carrier family 3... 29 5.4
AL133379-1|CAI19872.2| 408|Homo sapiens solute carrier family 3... 29 5.4
AK125152-1|BAC86065.1| 202|Homo sapiens protein ( Homo sapiens ... 29 5.4
AK125151-1|BAC86064.1| 202|Homo sapiens protein ( Homo sapiens ... 29 5.4
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 28 7.2
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 28 7.2
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 28 7.2
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 28 7.2
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 28 7.2
AB083591-1|BAB89304.1| 233|Homo sapiens putative G-protein coup... 28 7.2
D87450-1|BAA13391.1| 1287|Homo sapiens KIAA0261 protein. 28 9.5
AL844892-1|CAH73376.1| 1275|Homo sapiens wings apart-like homolo... 28 9.5
AL731569-1|CAI16708.1| 1275|Homo sapiens wings apart-like homolo... 28 9.5
AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein. 28 9.5
AL080186-1|CAB45767.1| 299|Homo sapiens hypothetical protein pr... 28 9.5
AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein. 28 9.5
AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein. 28 9.5
>M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein.
Length = 125
Score = 113 bits (272), Expect = 1e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = -3
Query: 238 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 59
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 58 HGQVIYTRATKGDDPVA 8
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 113 bits (272), Expect = 1e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = -3
Query: 238 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 59
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 58 HGQVIYTRATKGDDPVA 8
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 113 bits (272), Expect = 1e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = -3
Query: 238 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 59
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 58 HGQVIYTRATKGDDPVA 8
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 113 bits (272), Expect = 1e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = -3
Query: 238 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 59
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 58 HGQVIYTRATKGDDPVA 8
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 113 bits (272), Expect = 1e-25
Identities = 58/77 (75%), Positives = 61/77 (79%)
Frame = -3
Query: 238 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQVVQH 59
LNN VLFDK TY+KL KEVP YKLITPAVVSERLK+RGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 58 HGQVIYTRATKGDDPVA 8
QVIYTR TKG D A
Sbjct: 104 RAQVIYTRNTKGGDAPA 120
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGP 259
R+TRRL P++ RR R P A P+ R P
Sbjct: 382 RKTRRLSPSASPPRRRHRPSPPATPPKTRDSP 413
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 351 RTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 250
RTR P+ + RR R D + + PRRR P+ +
Sbjct: 287 RTRSRSPSHTRPRRRHRSDKMYS-PRRRPSPRRR 319
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGP 259
R+TRRL P++ RR R P A P+ R P
Sbjct: 382 RKTRRLSPSASPPRRRHRPSPPATPPKTRDSP 413
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 351 RTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 250
RTR P+ + RR R D + + PRRR P+ +
Sbjct: 287 RTRSRSPSHTRPRRRHRSDKMYS-PRRRPSPRRR 319
>AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ39715 fis, clone SMINT2013228. ).
Length = 120
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 178 VGLPCTVSHTWVYQTTPGCSTCH 246
+GL T +HTW Y+ P CS C+
Sbjct: 20 LGLLHTHTHTWYYRCEPTCSACY 42
>BC028615-1|AAH28615.1| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 54 PWCWTTCLMRP------FSLSS-MSALLAREPRT-FNLSDTTAGVISLYCGTSLYSFSYV 209
PW W L+ F L S M ++ + T NLS TA + SL+CG L+ + +
Sbjct: 277 PWDWQIGLLYVGFSACMFGLYSFMQVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 336
Query: 210 GL 215
GL
Sbjct: 337 GL 338
>Z95326-1|CAI20271.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 54 PWCWTTCLMRP------FSLSSMSALLAREPR--TFNLSDTTAGVISLYCGTSLYSFSYV 209
PW W L+ F L S ++ ++ + NLS TA + SL+CG L+ + +
Sbjct: 277 PWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 336
Query: 210 GL 215
GL
Sbjct: 337 GL 338
>BX640761-1|CAE45867.1| 228|Homo sapiens hypothetical protein
protein.
Length = 228
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 54 PWCWTTCLMRP------FSLSSMSALLAREPR--TFNLSDTTAGVISLYCGTSLYSFSYV 209
PW W L+ F L S ++ ++ + NLS TA + SL+CG L+ + +
Sbjct: 97 PWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 156
Query: 210 GL 215
GL
Sbjct: 157 GL 158
>BC114925-1|AAI14926.1| 408|Homo sapiens SLC35F1 protein protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 54 PWCWTTCLMRP------FSLSSMSALLAREPR--TFNLSDTTAGVISLYCGTSLYSFSYV 209
PW W L+ F L S ++ ++ + NLS TA + SL+CG L+ + +
Sbjct: 277 PWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 336
Query: 210 GL 215
GL
Sbjct: 337 GL 338
>BC110844-1|AAI10845.1| 201|Homo sapiens DLG2 protein protein.
Length = 201
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 48 TCPWCWTTCLMRPFSLSSMSALLAREPRT-FNLSDTTAGVISLYCGTSLYSFSYVGLSNN 224
+C WC+ +C S + +SAL P++ F+LS G+ L + + GL +
Sbjct: 45 SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100
Query: 225 TWLFNLSRTFPLDHF 269
L FP F
Sbjct: 101 FLAIYLQAFFPSPKF 115
>BC104969-1|AAI04970.1| 202|Homo sapiens DLG2 protein protein.
Length = 202
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 48 TCPWCWTTCLMRPFSLSSMSALLAREPRT-FNLSDTTAGVISLYCGTSLYSFSYVGLSNN 224
+C WC+ +C S + +SAL P++ F+LS G+ L + + GL +
Sbjct: 45 SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100
Query: 225 TWLFNLSRTFPLDHF 269
L FP F
Sbjct: 101 FLAIYLQAFFPSPKF 115
>AL449196-1|CAI16177.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 54 PWCWTTCLMRP------FSLSSMSALLAREPR--TFNLSDTTAGVISLYCGTSLYSFSYV 209
PW W L+ F L S ++ ++ + NLS TA + SL+CG L+ + +
Sbjct: 277 PWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 336
Query: 210 GL 215
GL
Sbjct: 337 GL 338
>AL136478-1|CAM28261.1| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 54 PWCWTTCLMRP------FSLSSMSALLAREPR--TFNLSDTTAGVISLYCGTSLYSFSYV 209
PW W L+ F L S ++ ++ + NLS TA + SL+CG L+ + +
Sbjct: 277 PWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 336
Query: 210 GL 215
GL
Sbjct: 337 GL 338
>AL133379-1|CAI19872.2| 408|Homo sapiens solute carrier family 35,
member F1 protein.
Length = 408
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +3
Query: 54 PWCWTTCLMRP------FSLSSMSALLAREPR--TFNLSDTTAGVISLYCGTSLYSFSYV 209
PW W L+ F L S ++ ++ + NLS TA + SL+CG L+ + +
Sbjct: 277 PWDWQIGLLYVGFSACMFGLYSFMPVVIKKTSATSVNLSLLTADLYSLFCGLFLFHYKFS 336
Query: 210 GL 215
GL
Sbjct: 337 GL 338
>AK125152-1|BAC86065.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ43162 fis, clone FCBBF2007510. ).
Length = 202
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 48 TCPWCWTTCLMRPFSLSSMSALLAREPRT-FNLSDTTAGVISLYCGTSLYSFSYVGLSNN 224
+C WC+ +C S + +SAL P++ F+LS G+ L + + GL +
Sbjct: 45 SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100
Query: 225 TWLFNLSRTFPLDHF 269
L FP F
Sbjct: 101 FLAIYLQAFFPSPKF 115
>AK125151-1|BAC86064.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ43161 fis, clone FCBBF2001183. ).
Length = 202
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 48 TCPWCWTTCLMRPFSLSSMSALLAREPRT-FNLSDTTAGVISLYCGTSLYSFSYVGLSNN 224
+C WC+ +C S + +SAL P++ F+LS G+ L + + GL +
Sbjct: 45 SCNWCYFSCSGTMCSTTGVSAL----PKSKFHLSAKCRGICFLLSSHRIVGHLFAGLLRD 100
Query: 225 TWLFNLSRTFPLDHF 269
L FP F
Sbjct: 101 FLAIYLQAFFPSPKF 115
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 259
R+TRRL P++ RR R P A P+ R P
Sbjct: 383 RKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 259
R+TRRL P++ RR R P A P+ R P
Sbjct: 383 RKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 259
R+TRRL P++ RR R P A P+ R P
Sbjct: 378 RKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 410
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 259
R+TRRL P++ RR R P A P+ R P
Sbjct: 383 RKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 259
R+TRRL P++ RR R P A P+ R P
Sbjct: 378 RKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 410
>AB083591-1|BAB89304.1| 233|Homo sapiens putative G-protein coupled
receptor protein.
Length = 233
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +1
Query: 106 VLFSPGNLGPLIFQIRQQV*LACTVGLPCTVSHT-WVYQTTP 228
+L SP I + L CT+GL C+ SH W+ T P
Sbjct: 181 LLLSPAGTSCYISLLGALAFLPCTLGLGCSFSHVGWLLWTQP 222
>D87450-1|BAA13391.1| 1287|Homo sapiens KIAA0261 protein.
Length = 1287
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 351 RTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKE 253
R R RP + ++ R RR+ PVA P R G E
Sbjct: 61 RARVPRPPAGRRERERRRRPVAKAPARLRGEYE 93
>AL844892-1|CAH73376.1| 1275|Homo sapiens wings apart-like homolog
(Drosophila) protein.
Length = 1275
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 351 RTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKE 253
R R RP + ++ R RR+ PVA P R G E
Sbjct: 49 RARVPRPPAGRRERERRRRPVAKAPARLRGEYE 81
>AL731569-1|CAI16708.1| 1275|Homo sapiens wings apart-like homolog
(Drosophila) protein.
Length = 1275
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 351 RTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKE 253
R R RP + ++ R RR+ PVA P R G E
Sbjct: 49 RARVPRPPAGRRERERRRRPVAKAPARLRGEYE 81
>AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein.
Length = 805
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 250
R RR NS+++ RRR + P + R RS +++
Sbjct: 592 RDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDR 626
>AL080186-1|CAB45767.1| 299|Homo sapiens hypothetical protein
protein.
Length = 299
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 250
R RR NS+++ RRR + P + R RS +++
Sbjct: 86 RDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDR 120
>AF314185-1|AAL76164.1| 283|Homo sapiens SR rich protein protein.
Length = 283
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 250
R RR NS+++ RRR + P + R RS +++
Sbjct: 70 RDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDR 104
>AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein.
Length = 805
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 354 RRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 250
R RR NS+++ RRR + P + R RS +++
Sbjct: 592 RDRRRSNRNSIERERRRNRSPSRERRRSRSRSRDR 626
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,078,132
Number of Sequences: 237096
Number of extensions: 1361116
Number of successful extensions: 3212
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3189
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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