Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15h16
         (391 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14 pro...   144   9e-35
BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14 p...   144   9e-35
BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14 p...   144   9e-35
BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14 p...   144   9e-35
BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14 p...   144   9e-35
BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14 p...   144   9e-35
BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal pr...   133   2e-31

>M13934-2|AAB59505.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  144 bits (349), Expect = 9e-35
 Identities = 73/106 (68%), Positives = 79/106 (74%)
 Frame = -3

Query: 347 NTFVHXTDLSGRETIARVXGGMKVKADRDEASPYXAMLAAQDVAEKCKTLGITALHIKLR 168
           +TFVH TDLSG+ETI RV GGMKVKADRDE+SPY AMLAAQDVA++CK LGITALHIKLR
Sbjct: 39  DTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLR 98

Query: 167 AXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDSTRRNG 30
           A           GAQ          MKIGRIEDVTP+PSDSTRR G
Sbjct: 99  ATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKG 144


>BC091474-1|AAH91474.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  144 bits (349), Expect = 9e-35
 Identities = 73/106 (68%), Positives = 79/106 (74%)
 Frame = -3

Query: 347 NTFVHXTDLSGRETIARVXGGMKVKADRDEASPYXAMLAAQDVAEKCKTLGITALHIKLR 168
           +TFVH TDLSG+ETI RV GGMKVKADRDE+SPY AMLAAQDVA++CK LGITALHIKLR
Sbjct: 39  DTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLR 98

Query: 167 AXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDSTRRNG 30
           A           GAQ          MKIGRIEDVTP+PSDSTRR G
Sbjct: 99  ATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKG 144


>BC020515-1|AAH20515.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  144 bits (349), Expect = 9e-35
 Identities = 73/106 (68%), Positives = 79/106 (74%)
 Frame = -3

Query: 347 NTFVHXTDLSGRETIARVXGGMKVKADRDEASPYXAMLAAQDVAEKCKTLGITALHIKLR 168
           +TFVH TDLSG+ETI RV GGMKVKADRDE+SPY AMLAAQDVA++CK LGITALHIKLR
Sbjct: 39  DTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLR 98

Query: 167 AXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDSTRRNG 30
           A           GAQ          MKIGRIEDVTP+PSDSTRR G
Sbjct: 99  ATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKG 144


>BC006784-1|AAH06784.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  144 bits (349), Expect = 9e-35
 Identities = 73/106 (68%), Positives = 79/106 (74%)
 Frame = -3

Query: 347 NTFVHXTDLSGRETIARVXGGMKVKADRDEASPYXAMLAAQDVAEKCKTLGITALHIKLR 168
           +TFVH TDLSG+ETI RV GGMKVKADRDE+SPY AMLAAQDVA++CK LGITALHIKLR
Sbjct: 39  DTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLR 98

Query: 167 AXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDSTRRNG 30
           A           GAQ          MKIGRIEDVTP+PSDSTRR G
Sbjct: 99  ATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKG 144


>BC003401-1|AAH03401.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  144 bits (349), Expect = 9e-35
 Identities = 73/106 (68%), Positives = 79/106 (74%)
 Frame = -3

Query: 347 NTFVHXTDLSGRETIARVXGGMKVKADRDEASPYXAMLAAQDVAEKCKTLGITALHIKLR 168
           +TFVH TDLSG+ETI RV GGMKVKADRDE+SPY AMLAAQDVA++CK LGITALHIKLR
Sbjct: 39  DTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLR 98

Query: 167 AXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDSTRRNG 30
           A           GAQ          MKIGRIEDVTP+PSDSTRR G
Sbjct: 99  ATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKG 144


>BC001126-1|AAH01126.1|  151|Homo sapiens ribosomal protein S14
           protein.
          Length = 151

 Score =  144 bits (349), Expect = 9e-35
 Identities = 73/106 (68%), Positives = 79/106 (74%)
 Frame = -3

Query: 347 NTFVHXTDLSGRETIARVXGGMKVKADRDEASPYXAMLAAQDVAEKCKTLGITALHIKLR 168
           +TFVH TDLSG+ETI RV GGMKVKADRDE+SPY AMLAAQDVA++CK LGITALHIKLR
Sbjct: 39  DTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLR 98

Query: 167 AXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDSTRRNG 30
           A           GAQ          MKIGRIEDVTP+PSDSTRR G
Sbjct: 99  ATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKG 144


>BC072682-1|AAH72682.1|  170|Homo sapiens similar to ribosomal
           protein S14 protein.
          Length = 170

 Score =  133 bits (321), Expect = 2e-31
 Identities = 67/106 (63%), Positives = 75/106 (70%)
 Frame = -3

Query: 347 NTFVHXTDLSGRETIARVXGGMKVKADRDEASPYXAMLAAQDVAEKCKTLGITALHIKLR 168
           +TFVH TDLSG++TI RV GGMKVKADRDE+SPY AML  QDVA++CK LGI ALHI+LR
Sbjct: 39  DTFVHVTDLSGKQTICRVTGGMKVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLR 98

Query: 167 AXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDSTRRNG 30
           A           GAQ          MKIGRIEDVTP+PSDST R G
Sbjct: 99  ATGGNRTKTLGPGAQSALRALACSGMKIGRIEDVTPIPSDSTLRKG 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,477,134
Number of Sequences: 237096
Number of extensions: 1062115
Number of successful extensions: 2055
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2055
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)