Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15h13
(673 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical pr... 236 9e-63
Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical pr... 236 9e-63
AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuo... 236 9e-63
AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuo... 236 9e-63
Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical pr... 231 3e-61
Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical pr... 231 3e-61
AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuo... 231 3e-61
AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuro... 231 3e-61
Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical pr... 231 3e-61
Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical pr... 231 3e-61
AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuo... 231 3e-61
AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuo... 231 3e-61
Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical pr... 170 9e-43
AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical ... 170 9e-43
AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein. 170 9e-43
U40934-4|AAA81682.1| 873|Caenorhabditis elegans Vacuolar h atpa... 126 2e-29
AB055110-1|BAB62291.1| 873|Caenorhabditis elegans VHA-5 protein. 126 2e-29
Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical pr... 116 2e-26
AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein. 116 2e-26
Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical pr... 34 0.080
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 33 0.18
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 2.3
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 2.3
Z66499-8|CAI70408.1| 189|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z66499-7|CAA91298.2| 407|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 28 5.3
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 28 5.3
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 28 5.3
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 6.9
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 6.9
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 6.9
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 6.9
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 28 6.9
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 28 6.9
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 28 6.9
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 27 9.2
AC006790-12|AAF60728.2| 332|Caenorhabditis elegans Cyclin h pro... 27 9.2
>Z11115-8|CAD30452.1| 888|Caenorhabditis elegans Hypothetical
protein ZK637.8e protein.
Length = 888
Score = 236 bits (578), Expect = 9e-63
Identities = 110/141 (78%), Positives = 129/141 (91%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDEHE 144
ELTELKHILRKTQ FF+EHE
Sbjct: 135 SELTELKHILRKTQTFFEEHE 155
>Z11115-6|CAD30450.1| 894|Caenorhabditis elegans Hypothetical
protein ZK637.8c protein.
Length = 894
Score = 236 bits (578), Expect = 9e-63
Identities = 110/141 (78%), Positives = 129/141 (91%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDEHE 144
ELTELKHILRKTQ FF+EHE
Sbjct: 135 SELTELKHILRKTQTFFEEHE 155
>AF320903-1|AAG41436.1| 888|Caenorhabditis elegans UNC-32E vacuolar
proton pump 101kDa subunit variant protein.
Length = 888
Score = 236 bits (578), Expect = 9e-63
Identities = 110/141 (78%), Positives = 129/141 (91%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDEHE 144
ELTELKHILRKTQ FF+EHE
Sbjct: 135 SELTELKHILRKTQTFFEEHE 155
>AF320901-1|AAG41434.1| 894|Caenorhabditis elegans UNC-32C vacuolar
proton pump 102kDa subunit variant protein.
Length = 894
Score = 236 bits (578), Expect = 9e-63
Identities = 110/141 (78%), Positives = 129/141 (91%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDEHE 144
ELTELKHILRKTQ FF+EHE
Sbjct: 135 SELTELKHILRKTQTFFEEHE 155
>Z11115-9|CAD30453.1| 889|Caenorhabditis elegans Hypothetical
protein ZK637.8f protein.
Length = 889
Score = 231 bits (566), Expect = 3e-61
Identities = 112/158 (70%), Positives = 134/158 (84%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDEHEGGANTTESMTRALISDD 93
ELTELKHILRKTQ FF+E A T E + A + +
Sbjct: 135 SELTELKHILRKTQTFFEE----AGTGEMLPPAAVESE 168
>Z11115-5|CAA77453.2| 883|Caenorhabditis elegans Hypothetical
protein ZK637.8b protein.
Length = 883
Score = 231 bits (566), Expect = 3e-61
Identities = 112/158 (70%), Positives = 134/158 (84%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDEHEGGANTTESMTRALISDD 93
ELTELKHILRKTQ FF+E A T E + A + +
Sbjct: 135 SELTELKHILRKTQTFFEE----AGTGEMLPPAAVESE 168
>AF320904-1|AAG41437.1| 889|Caenorhabditis elegans UNC-32F vacuolar
proton pump 101kDa subunit variant protein.
Length = 889
Score = 231 bits (566), Expect = 3e-61
Identities = 112/158 (70%), Positives = 134/158 (84%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDEHEGGANTTESMTRALISDD 93
ELTELKHILRKTQ FF+E A T E + A + +
Sbjct: 135 SELTELKHILRKTQTFFEE----AGTGEMLPPAAVESE 168
>AF320900-1|AAG41433.1| 883|Caenorhabditis elegans UNC-32B neuronal
vacuolar protonpump 100 kDa subunit variant protein.
Length = 883
Score = 231 bits (566), Expect = 3e-61
Identities = 112/158 (70%), Positives = 134/158 (84%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDEHEGGANTTESMTRALISDD 93
ELTELKHILRKTQ FF+E A T E + A + +
Sbjct: 135 SELTELKHILRKTQTFFEE----AGTGEMLPPAAVESE 168
>Z11115-7|CAD30451.1| 899|Caenorhabditis elegans Hypothetical
protein ZK637.8d protein.
Length = 899
Score = 231 bits (565), Expect = 3e-61
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDE 150
ELTELKHILRKTQ FF+E
Sbjct: 135 SELTELKHILRKTQTFFEE 153
>Z11115-4|CAA77448.2| 905|Caenorhabditis elegans Hypothetical
protein ZK637.8a protein.
Length = 905
Score = 231 bits (565), Expect = 3e-61
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDE 150
ELTELKHILRKTQ FF+E
Sbjct: 135 SELTELKHILRKTQTFFEE 153
>AF320902-1|AAG41435.1| 899|Caenorhabditis elegans UNC-32D vacuolar
proton pump 103kDa subunit variant protein.
Length = 899
Score = 231 bits (565), Expect = 3e-61
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDE 150
ELTELKHILRKTQ FF+E
Sbjct: 135 SELTELKHILRKTQTFFEE 153
>AF320899-1|AAG41432.1| 905|Caenorhabditis elegans UNC-32A vacuolar
proton pump 103kDa subunit variant protein.
Length = 905
Score = 231 bits (565), Expect = 3e-61
Identities = 108/139 (77%), Positives = 127/139 (91%)
Frame = -3
Query: 566 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 387
++RSE+M L QL+LQS+A+Y CV+ELGELGLVQFRDLNPDV++FQRK+VNEVRRCDEMER
Sbjct: 16 IYRSEQMCLAQLYLQSDASYQCVAELGELGLVQFRDLNPDVSSFQRKYVNEVRRCDEMER 75
Query: 386 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 207
KLRYLE+EI++D IPML+ GE P+AP PREMIDLEATFEKLENELREVN+N E LK+N+
Sbjct: 76 KLRYLEREIKKDQIPMLD-TGENPDAPLPREMIDLEATFEKLENELREVNKNEETLKKNF 134
Query: 206 LELTELKHILRKTQVFFDE 150
ELTELKHILRKTQ FF+E
Sbjct: 135 SELTELKHILRKTQTFFEE 153
>Z50872-8|CAA90758.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 170 bits (413), Expect = 9e-43
Identities = 83/176 (47%), Positives = 118/176 (67%)
Frame = -3
Query: 575 MGSLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDE 396
MGS++RSE M LCQ+F QSE+AY CV+ELGELG+ QF DLN + NA+ RKFVNEVRRCDE
Sbjct: 1 MGSIYRSEHMKLCQIFFQSESAYQCVAELGELGMAQFIDLNEEQNAYTRKFVNEVRRCDE 60
Query: 395 MERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALK 216
MERK+ ++E EI +D +P+ + P APQP+ M ++EA EKLE EL ++N+N + LK
Sbjct: 61 MERKINFVEDEITKDLVPIPDYDEHIP-APQPKHMGEMEANLEKLEEELVQINKNCKVLK 119
Query: 215 RNYLELTELKHILRKTQVFFDEHEGGANTTESMTRALISDDPNRHMGHVQLGLRDK 48
N+++L E+K +L D H + +M+ IS+ G + G++D+
Sbjct: 120 NNHVQLLEMKAVLEHVTSLLDPH---SKREAAMS---ISEAARGEAGPISFGMKDE 169
>AL031269-3|CAA20334.1| 865|Caenorhabditis elegans Hypothetical
protein VW02B12L.1 protein.
Length = 865
Score = 170 bits (413), Expect = 9e-43
Identities = 83/176 (47%), Positives = 118/176 (67%)
Frame = -3
Query: 575 MGSLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDE 396
MGS++RSE M LCQ+F QSE+AY CV+ELGELG+ QF DLN + NA+ RKFVNEVRRCDE
Sbjct: 1 MGSIYRSEHMKLCQIFFQSESAYQCVAELGELGMAQFIDLNEEQNAYTRKFVNEVRRCDE 60
Query: 395 MERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALK 216
MERK+ ++E EI +D +P+ + P APQP+ M ++EA EKLE EL ++N+N + LK
Sbjct: 61 MERKINFVEDEITKDLVPIPDYDEHIP-APQPKHMGEMEANLEKLEEELVQINKNCKVLK 119
Query: 215 RNYLELTELKHILRKTQVFFDEHEGGANTTESMTRALISDDPNRHMGHVQLGLRDK 48
N+++L E+K +L D H + +M+ IS+ G + G++D+
Sbjct: 120 NNHVQLLEMKAVLEHVTSLLDPH---SKREAAMS---ISEAARGEAGPISFGMKDE 169
>AB055111-1|BAB62292.1| 865|Caenorhabditis elegans VHA-6 protein.
Length = 865
Score = 170 bits (413), Expect = 9e-43
Identities = 83/176 (47%), Positives = 118/176 (67%)
Frame = -3
Query: 575 MGSLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDE 396
MGS++RSE M LCQ+F QSE+AY CV+ELGELG+ QF DLN + NA+ RKFVNEVRRCDE
Sbjct: 1 MGSIYRSEHMKLCQIFFQSESAYQCVAELGELGMAQFIDLNEEQNAYTRKFVNEVRRCDE 60
Query: 395 MERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALK 216
MERK+ ++E EI +D +P+ + P APQP+ M ++EA EKLE EL ++N+N + LK
Sbjct: 61 MERKINFVEDEITKDLVPIPDYDEHIP-APQPKHMGEMEANLEKLEEELVQINKNCKVLK 119
Query: 215 RNYLELTELKHILRKTQVFFDEHEGGANTTESMTRALISDDPNRHMGHVQLGLRDK 48
N+++L E+K +L D H + +M+ IS+ G + G++D+
Sbjct: 120 NNHVQLLEMKAVLEHVTSLLDPH---SKREAAMS---ISEAARGEAGPISFGMKDE 169
>U40934-4|AAA81682.1| 873|Caenorhabditis elegans Vacuolar h atpase
protein 5 protein.
Length = 873
Score = 126 bits (303), Expect = 2e-29
Identities = 66/142 (46%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Frame = -3
Query: 575 MGSLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDE 396
MGSL RSEEM CQL ++ +AA+ V+E+G+ VQF+DLNP+VN+FQR FV ++RR DE
Sbjct: 1 MGSLSRSEEMRFCQLIVEKDAAFNIVAEIGKQPYVQFKDLNPNVNSFQRTFVKDIRRYDE 60
Query: 395 MERKLRYLEKEIRRDG--IPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEA 222
MERKLR+LE +I +D IP G+ P E+ LE T +LE +++ +N +
Sbjct: 61 MERKLRFLESQIVKDEIVIPGRVDTGDYTILP-TSELNTLEGTLTELEKDVKSMNDSDSQ 119
Query: 221 LKRNYLELTELKHILRKTQVFF 156
LK N+++L E +L KT FF
Sbjct: 120 LKANFMDLKEWDAVLDKTDEFF 141
>AB055110-1|BAB62291.1| 873|Caenorhabditis elegans VHA-5 protein.
Length = 873
Score = 126 bits (303), Expect = 2e-29
Identities = 66/142 (46%), Positives = 93/142 (65%), Gaps = 2/142 (1%)
Frame = -3
Query: 575 MGSLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDE 396
MGSL RSEEM CQL ++ +AA+ V+E+G+ VQF+DLNP+VN+FQR FV ++RR DE
Sbjct: 1 MGSLSRSEEMRFCQLIVEKDAAFNIVAEIGKQPYVQFKDLNPNVNSFQRTFVKDIRRYDE 60
Query: 395 MERKLRYLEKEIRRDG--IPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEA 222
MERKLR+LE +I +D IP G+ P E+ LE T +LE +++ +N +
Sbjct: 61 MERKLRFLESQIVKDEIVIPGRVDTGDYTILP-TSELNTLEGTLTELEKDVKSMNDSDSQ 119
Query: 221 LKRNYLELTELKHILRKTQVFF 156
LK N+++L E +L KT FF
Sbjct: 120 LKANFMDLKEWDAVLDKTDEFF 141
>Z99169-1|CAB16306.2| 966|Caenorhabditis elegans Hypothetical
protein C26H9A.1 protein.
Length = 966
Score = 116 bits (278), Expect = 2e-26
Identities = 60/144 (41%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Frame = -3
Query: 569 SLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEME 390
S+FRS+ M L Q+ L EAA+ CV+E+G+ G VQF DLN ++ + R FV ++RRC+EME
Sbjct: 47 SMFRSDPMKLYQMILVKEAAFECVAEIGKHGNVQFVDLNAKMSLYSRTFVKQMRRCEEME 106
Query: 389 RKLRYLEKEI--RRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALK 216
RKLR+LEK++ + G+ I AP EMI LE ++LE E ++N N AL+
Sbjct: 107 RKLRFLEKQVITCKPGLDPKSIDYTDLSAPTQAEMIQLEHKLDQLEREFLDLNNNDYALR 166
Query: 215 RNYLELTELKHILRKTQVFFDEHE 144
+N E ++R FF H+
Sbjct: 167 KNLNSSKEFLQVMRLVDEFFQVHK 190
>AB055112-1|BAB62293.1| 966|Caenorhabditis elegans VHA-7 protein.
Length = 966
Score = 116 bits (278), Expect = 2e-26
Identities = 60/144 (41%), Positives = 87/144 (60%), Gaps = 2/144 (1%)
Frame = -3
Query: 569 SLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEME 390
S+FRS+ M L Q+ L EAA+ CV+E+G+ G VQF DLN ++ + R FV ++RRC+EME
Sbjct: 47 SMFRSDPMKLYQMILVKEAAFECVAEIGKHGNVQFVDLNAKMSLYSRTFVKQMRRCEEME 106
Query: 389 RKLRYLEKEI--RRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALK 216
RKLR+LEK++ + G+ I AP EMI LE ++LE E ++N N AL+
Sbjct: 107 RKLRFLEKQVITCKPGLDPKSIDYTDLSAPTQAEMIQLEHKLDQLEREFLDLNNNDYALR 166
Query: 215 RNYLELTELKHILRKTQVFFDEHE 144
+N E ++R FF H+
Sbjct: 167 KNLNSSKEFLQVMRLVDEFFQVHK 190
>Z71181-3|CAA94896.1| 493|Caenorhabditis elegans Hypothetical
protein K07C5.3 protein.
Length = 493
Score = 34.3 bits (75), Expect = 0.080
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Frame = -3
Query: 428 KFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEK-LENE 252
KF + R DE++ +R + KE+ D + + G P+AP+ + L++ EK N+
Sbjct: 295 KFAAKRMRHDELDILIRLIRKELDTDADASIILKGVHPKAPEIFQSNGLDSVIEKYYNND 354
Query: 251 LREVNQNAEALKRNYLELTELKHILRKTQVFFDEHEGGANTTES 120
+ Q + +N + K R+ + +E + + +ES
Sbjct: 355 FEKSAQQKTSSSKNKVAEPSFKKSKRQEESDDEESDVEMSNSES 398
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = -3
Query: 470 QFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREM 291
++R+ ++ K+ V++ EME + LEK ++ + M E G + R
Sbjct: 306 KYREARDGKELYKSKYDIVVKKNLEMEETITTLEKNLKTLQMEMKEKFGVEDNLQRMRNT 365
Query: 290 I-DLEATFEKLENELREVNQNAEALKRNYLELTELKH 183
I DLEA K E+ + + R EL E+ H
Sbjct: 366 IDDLEAEISKKNLEIEDFLDEKHRMDREIKELKEIVH 402
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -3
Query: 239 NQNAEALKRNYLELTELKHILRKTQVFFDEHEGGANTTESMTRALISDDPNRHMGHVQLG 60
++N+E LK+ E+ ELK L KT+ ++ N E +T ISD NR ++
Sbjct: 768 SENSENLKKFEAEIAELKASLEKTEKELTKYRNLYN--EKLT--AISDKENRSQIEMEHK 823
Query: 59 LRDKQESLE 33
L++ + L+
Sbjct: 824 LKNAESDLQ 832
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/69 (30%), Positives = 36/69 (52%)
Frame = -3
Query: 239 NQNAEALKRNYLELTELKHILRKTQVFFDEHEGGANTTESMTRALISDDPNRHMGHVQLG 60
++N+E LK+ E+ ELK L KT+ ++ N E +T ISD NR ++
Sbjct: 780 SENSENLKKFEAEIAELKASLEKTEKELTKYRNLYN--EKLT--AISDKENRSQIEMEHK 835
Query: 59 LRDKQESLE 33
L++ + L+
Sbjct: 836 LKNAESDLQ 844
>Z66499-8|CAI70408.1| 189|Caenorhabditis elegans Hypothetical
protein T01B7.5b protein.
Length = 189
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 269 EKLENELREVNQNAEALKRNYLELTELKHILRKTQVFFDEHEGGANTTESMTRALIS 99
EKL++ L +++ E+LKR ++TE + L DE + A + LIS
Sbjct: 17 EKLDDPLVDIHPVVESLKRLEKKITECEDFLHSNSDHLDELKKWAESEPENMEELIS 73
>Z66499-7|CAA91298.2| 407|Caenorhabditis elegans Hypothetical
protein T01B7.5a protein.
Length = 407
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 269 EKLENELREVNQNAEALKRNYLELTELKHILRKTQVFFDEHEGGANTTESMTRALIS 99
EKL++ L +++ E+LKR ++TE + L DE + A + LIS
Sbjct: 235 EKLDDPLVDIHPVVESLKRLEKKITECEDFLHSNSDHLDELKKWAESEPENMEELIS 291
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = -3
Query: 392 ERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKR 213
ER L+ L KE DG +E A + E LE ELRE + +
Sbjct: 53 ERDLKQLIKEFDADGSGEIEFE---EFAAMVANFVVNNENDEGLEEELREAFRLYDKEGN 109
Query: 212 NYLELTELKHILRKTQVFFDEHE 144
Y+ +++L+ ILR E E
Sbjct: 110 GYINVSDLRDILRALDDNVSEEE 132
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 28.3 bits (60), Expect = 5.3
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = -3
Query: 302 PREMIDLEATFEKLENE-LREVNQNAEALKRNYLELTELKHILRKTQVFFDEHEGGANTT 126
P+++ E F+KL+N+ L++ + EAL+ + E E L T D + N
Sbjct: 1179 PKQLTKEEEQFKKLQNDLLKQAKERLEALEMS--EDMEKPRRLEDTVNLEDYGDDQENQE 1236
Query: 125 ESMTRALISDDPNRHMGHVQLGLRDKQE 42
+ T + + + +G R KQE
Sbjct: 1237 DENTPTNFPKTIDEEIEELSIGARKKQE 1264
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = -3
Query: 392 ERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKR 213
ER L+ L KE DG +E A + E LE ELRE + +
Sbjct: 53 ERDLKQLIKEFDADGSGEIEFE---EFAAMVANFVVNNENDEGLEEELREAFRLYDKEGN 109
Query: 212 NYLELTELKHILRKTQVFFDEHE 144
Y+ +++L+ ILR E E
Sbjct: 110 GYINVSDLRDILRALDDNVSEEE 132
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 287 DLEATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQ 165
DL F+KL NEL++ ++L E++ LK L K++
Sbjct: 736 DLRGNFDKLTNELKQKGVTVDSLNE---EISSLKEQLNKSE 773
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 287 DLEATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQ 165
DL F+KL NEL++ ++L E++ LK L K++
Sbjct: 736 DLRGNFDKLTNELKQKGVTVDSLNE---EISSLKEQLNKSE 773
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 287 DLEATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQ 165
DL F+KL NEL++ ++L E++ LK L K++
Sbjct: 496 DLRGNFDKLTNELKQKGVTVDSLNE---EISSLKEQLNKSE 533
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -3
Query: 287 DLEATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQ 165
DL F+KL NEL++ ++L E++ LK L K++
Sbjct: 736 DLRGNFDKLTNELKQKGVTVDSLNE---EISSLKEQLNKSE 773
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 27.9 bits (59), Expect = 6.9
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -3
Query: 443 NAFQRKFVNEVRRCDEMERKLRYLEKEIRRD 351
N+F ++ + R DE E+++ LEKE++++
Sbjct: 227 NSFYQEMMENRRTVDEKEQEMHRLEKELKKE 257
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/80 (22%), Positives = 36/80 (45%)
Frame = -3
Query: 428 KFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENEL 249
K + + +E+E + EK + + EIP + +AP+ + I+ + E+
Sbjct: 923 KIPEKAQEIEEIEESPKKSEKAPEKPQ-EIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEI 981
Query: 248 REVNQNAEALKRNYLELTEL 189
+E+ Q +E E+ EL
Sbjct: 982 QEIPQKSEKTSEKRPEIEEL 1001
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/80 (22%), Positives = 36/80 (45%)
Frame = -3
Query: 428 KFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENEL 249
K + + +E+E + EK + + EIP + +AP+ + I+ + E+
Sbjct: 921 KIPEKAQEIEEIEESPKKSEKAPEKPQ-EIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEI 979
Query: 248 REVNQNAEALKRNYLELTEL 189
+E+ Q +E E+ EL
Sbjct: 980 QEIPQKSEKTSEKRPEIEEL 999
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Frame = -3
Query: 446 VNAFQRKFVNEVRRCDEMERKLRYLEKEI-RRDGIPMLEIPGECPEAPQ-----PREMID 285
V A Q + + ++ D L + KEI +P E+ + E Q E D
Sbjct: 1013 VQAKQEMGMTKEQQEDAKRAFLAAIRKEIPNASEVPQSELKAKIKELHQRICKLETEKYD 1072
Query: 284 LEATFEKLENELREVNQNAEALKRN 210
LE E+ E +++E+N+ + RN
Sbjct: 1073 LEKRHERQEYDMKELNERQRQVTRN 1097
>AC006790-12|AAF60728.2| 332|Caenorhabditis elegans Cyclin h
protein 1 protein.
Length = 332
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -3
Query: 269 EKLENELREVNQNAEALKRNYLELTELKHILRKTQV 162
EKLE + VNQ + RN++ +TE + K+Q+
Sbjct: 254 EKLEKTVTRVNQIMREVDRNFVAVTEQERENHKSQL 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,580,686
Number of Sequences: 27780
Number of extensions: 277395
Number of successful extensions: 1069
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1052
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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