Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15h05
(562 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 320 2e-87
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 320 2e-87
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 320 2e-87
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 320 2e-87
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 320 2e-87
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 320 2e-87
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 320 2e-87
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 320 2e-87
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 320 2e-87
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 320 2e-87
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 320 2e-87
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 320 2e-87
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 319 4e-87
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 318 8e-87
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 256 5e-68
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 224 1e-58
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 175 7e-44
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 128 1e-29
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 87 4e-17
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 35 0.17
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 29 8.5
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 29 8.5
U35373-1|AAB33572.1| 389|Homo sapiens DXS8237E protein. 29 8.5
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 29 8.5
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 29 8.5
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 29 8.5
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 29 8.5
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 29 8.5
AY596776-1|AAT02353.1| 127|Homo sapiens HCV p7-transactivated p... 29 8.5
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 29 8.5
AK124507-1|BAC85868.1| 127|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 29 8.5
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 46 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 105
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 106 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 165
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 166 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 225
Query: 20 RSLAP 6
+ P
Sbjct: 226 KGGKP 230
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 46 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 105
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 106 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 165
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 166 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 225
Query: 20 RSLAP 6
+ P
Sbjct: 226 KGGKP 230
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 320 bits (786), Expect = 2e-87
Identities = 154/185 (83%), Positives = 165/185 (89%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 319 bits (784), Expect = 4e-87
Identities = 154/185 (83%), Positives = 164/185 (88%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 318 bits (781), Expect = 8e-87
Identities = 153/185 (82%), Positives = 164/185 (88%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAE LR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLR 106
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N
Sbjct: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNY 166
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP PDH+ + EPKDE +P P SE
Sbjct: 167 YVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQ 226
Query: 20 RSLAP 6
+ P
Sbjct: 227 KGGKP 231
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 256 bits (626), Expect = 5e-68
Identities = 121/146 (82%), Positives = 129/146 (88%)
Frame = -3
Query: 443 LYAERVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 264
LYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 263 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 84
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 83 DHILVTEPKDEPVPLEPTSEVRSLAP 6
DH+ + EPKDE +P P SE + P
Sbjct: 121 DHVSIVEPKDEILPTTPISEQKGGKP 146
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 224 bits (548), Expect = 1e-58
Identities = 109/127 (85%), Positives = 116/127 (91%)
Frame = -3
Query: 515 KGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLRYKLIGGLAVRRACYG 336
+GRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 335 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 156
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 155 LGIKVKI 135
V +
Sbjct: 126 WDTSVHL 132
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 175 bits (427), Expect = 7e-44
Identities = 82/105 (78%), Positives = 88/105 (83%)
Frame = -3
Query: 320 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 141
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 140 KIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEVRSLAP 6
KIMLPWD GK GPKKP PDH+ + EPKDE +P P SE + P
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDEILPTTPISEQKGGKP 105
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 128 bits (310), Expect = 1e-29
Identities = 63/71 (88%), Positives = 68/71 (95%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLR
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLR 106
Query: 380 YKLIGGLAVRR 348
YKL+GGLAVRR
Sbjct: 107 YKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 87.0 bits (206), Expect = 4e-17
Identities = 42/49 (85%), Positives = 46/49 (93%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRG 414
EIII+ATRTQ+VLGEKGRRIRELT+VVQKRF PE SVELYAE+VATRG
Sbjct: 47 EIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 35.1 bits (77), Expect = 0.17
Identities = 18/47 (38%), Positives = 19/47 (40%)
Frame = -2
Query: 177 CASQARSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAPR 37
CAS RS R Q Q P P A RP PG+ APR
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGSLGPSAPAAPR 160
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>U35373-1|AAB33572.1| 389|Homo sapiens DXS8237E protein.
Length = 389
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 120 PARQERPEEATTRPHPGNRAQGRARAPRADQRSALPR 10
P RP + + HP RA+ R R+ R Q + LPR
Sbjct: 75 PPWSSRPTDIRRQGHPRRRAKRRRRSTRPRQLNRLPR 111
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>AY596776-1|AAT02353.1| 127|Homo sapiens HCV p7-transactivated
protein 1 protein.
Length = 127
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -2
Query: 375 AYRRSRCTSCLLW--CSPFHHGIWCP 304
A RR RC +C LW C WCP
Sbjct: 88 AARRCRCGACALWTPCGSARSAPWCP 113
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 151 SRTRSRSRSTSKSRSARRSKSKSSS 175
>AK124507-1|BAC85868.1| 127|Homo sapiens protein ( Homo sapiens
cDNA FLJ42516 fis, clone BRACE2047385. ).
Length = 127
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = -2
Query: 375 AYRRSRCTSCLLW--CSPFHHGIWCP 304
A RR RC +C LW C WCP
Sbjct: 88 AARRCRCGACALWTPCGSARSAPWCP 113
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 29.5 bits (63), Expect = 8.5
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = -1
Query: 148 SRSKSCCRGTSKARTARRSHNQTTS 74
SR++S R TSK+R+ARRS ++++S
Sbjct: 131 SRTRSRSRSTSKSRSARRSKSKSSS 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,068,611
Number of Sequences: 237096
Number of extensions: 2118305
Number of successful extensions: 10342
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 9891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10337
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -