Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15h05
(562 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal prot... 304 6e-83
BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p pro... 304 6e-83
AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p pro... 304 6e-83
AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA... 304 6e-83
X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal prot... 298 3e-81
AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila d... 34 0.11
AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown prot... 34 0.11
AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF... 34 0.11
AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE... 34 0.11
AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD... 34 0.11
AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC... 34 0.11
AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB... 34 0.11
AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA... 34 0.11
AE014297-610|AAF54020.1| 693|Drosophila melanogaster CG10101-PA... 29 5.7
M77166-1|AAA28528.1| 873|Drosophila melanogaster fasciclin II p... 28 7.5
M77165-1|AAA28527.1| 811|Drosophila melanogaster fasciclin II p... 28 7.5
BT014661-1|AAT27285.1| 773|Drosophila melanogaster GH15080p pro... 28 7.5
AL033125-2|CAA21826.1| 850|Drosophila melanogaster EG:EG0007.3,... 28 7.5
AL033125-1|CAA21825.1| 788|Drosophila melanogaster EG:EG0007.3,... 28 7.5
AE014298-607|AAN09119.1| 811|Drosophila melanogaster CG3665-PC,... 28 7.5
AE014298-606|AAN09118.1| 773|Drosophila melanogaster CG3665-PB,... 28 7.5
AE014298-605|AAF45925.2| 873|Drosophila melanogaster CG3665-PA,... 28 7.5
BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro... 28 9.9
BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p pro... 28 9.9
AY089510-1|AAL90248.1| 697|Drosophila melanogaster GH20325p pro... 28 9.9
AY058603-1|AAL13832.1| 1553|Drosophila melanogaster LD29482p pro... 28 9.9
AY051977-1|AAK93401.1| 931|Drosophila melanogaster LD44526p pro... 28 9.9
AY032851-1|AAK51129.1| 960|Drosophila melanogaster Cornetto pro... 28 9.9
AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1 pr... 28 9.9
AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH0352... 28 9.9
AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA... 28 9.9
AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA... 28 9.9
AE014296-1202|AAF50605.2| 960|Drosophila melanogaster CG32386-P... 28 9.9
AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,... 28 9.9
AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,... 28 9.9
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P... 28 9.9
AE013599-1631|AAF58428.1| 697|Drosophila melanogaster CG13325-P... 28 9.9
>L13690-1|AAA28875.1| 246|Drosophila melanogaster ribosomal protein
S3/AP endonucleaseDNA repair protein protein.
Length = 246
Score = 304 bits (746), Expect = 6e-83
Identities = 145/186 (77%), Positives = 162/186 (87%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIIIMAT+TQ VLGEKGRRIRELT++VQKRFN +ELYAE+VA RGLCAIAQAESLR
Sbjct: 49 EIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLR 108
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL GGLAVRRACYGVLR+IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND
Sbjct: 109 YKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 168
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E + P +E
Sbjct: 169 YVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEY 228
Query: 20 RSLAPA 3
+ P+
Sbjct: 229 KIPPPS 234
>BT024258-1|ABC86320.1| 253|Drosophila melanogaster IP15838p
protein.
Length = 253
Score = 304 bits (746), Expect = 6e-83
Identities = 145/186 (77%), Positives = 162/186 (87%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIIIMAT+TQ VLGEKGRRIRELT++VQKRFN +ELYAE+VA RGLCAIAQAESLR
Sbjct: 56 EIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLR 115
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL GGLAVRRACYGVLR+IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND
Sbjct: 116 YKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 175
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E + P +E
Sbjct: 176 YVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEY 235
Query: 20 RSLAPA 3
+ P+
Sbjct: 236 KIPPPS 241
>AY118971-1|AAM50831.1| 246|Drosophila melanogaster LD47488p
protein.
Length = 246
Score = 304 bits (746), Expect = 6e-83
Identities = 145/186 (77%), Positives = 162/186 (87%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIIIMAT+TQ VLGEKGRRIRELT++VQKRFN +ELYAE+VA RGLCAIAQAESLR
Sbjct: 49 EIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLR 108
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL GGLAVRRACYGVLR+IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND
Sbjct: 109 YKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 168
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E + P +E
Sbjct: 169 YVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEY 228
Query: 20 RSLAPA 3
+ P+
Sbjct: 229 KIPPPS 234
>AE014297-3319|AAF56129.1| 246|Drosophila melanogaster CG6779-PA
protein.
Length = 246
Score = 304 bits (746), Expect = 6e-83
Identities = 145/186 (77%), Positives = 162/186 (87%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIIIMAT+TQ VLGEKGRRIRELT++VQKRFN +ELYAE+VA RGLCAIAQAESLR
Sbjct: 49 EIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLR 108
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL GGLAVRRACYGVLR+IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND
Sbjct: 109 YKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 168
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E + P +E
Sbjct: 169 YVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEY 228
Query: 20 RSLAPA 3
+ P+
Sbjct: 229 KIPPPS 234
>X72921-1|CAA51425.1| 246|Drosophila melanogaster ribosomal protein
S3 protein.
Length = 246
Score = 298 bits (732), Expect = 3e-81
Identities = 143/186 (76%), Positives = 160/186 (86%)
Frame = -3
Query: 560 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLCAIAQAESLR 381
EIIIMAT+TQ VL EKGRRIRELT++VQKRFN +ELYAE+VA RGLCAIAQAESLR
Sbjct: 49 EIIIMATKTQQVLAEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLR 108
Query: 380 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 201
YKL G LAVRRACYGVLR+IMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND
Sbjct: 109 YKLTGELAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCND 168
Query: 200 YVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 21
YV TATRHVLLRQGVLGIKVK+MLP+D + K GPKKP PD++ V EPK+E + P +E
Sbjct: 169 YVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPETEY 228
Query: 20 RSLAPA 3
+ P+
Sbjct: 229 KIPPPS 234
>AJ238847-1|CAB52798.1| 1301|Drosophila melanogaster drosophila
dodeca-satellite protein1 protein.
Length = 1301
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 527 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLC-AIAQAE 390
+LG+ G+R+RE+ V R NIP QS E +E + G IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227
>AF132179-1|AAD34767.1| 1301|Drosophila melanogaster unknown
protein.
Length = 1301
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 527 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLC-AIAQAE 390
+LG+ G+R+RE+ V R NIP QS E +E + G IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227
>AE013599-2691|AAM68451.1| 1301|Drosophila melanogaster CG5170-PF,
isoform F protein.
Length = 1301
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 527 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLC-AIAQAE 390
+LG+ G+R+RE+ V R NIP QS E +E + G IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227
>AE013599-2690|AAM68450.1| 1301|Drosophila melanogaster CG5170-PE,
isoform E protein.
Length = 1301
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 527 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLC-AIAQAE 390
+LG+ G+R+RE+ V R NIP QS E +E + G IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227
>AE013599-2689|AAM68449.1| 1301|Drosophila melanogaster CG5170-PD,
isoform D protein.
Length = 1301
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 527 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLC-AIAQAE 390
+LG+ G+R+RE+ V R NIP QS E +E + G IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227
>AE013599-2688|AAF57691.2| 1301|Drosophila melanogaster CG5170-PC,
isoform C protein.
Length = 1301
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 527 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLC-AIAQAE 390
+LG+ G+R+RE+ V R NIP QS E +E + G IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227
>AE013599-2687|AAS64810.1| 1301|Drosophila melanogaster CG5170-PB,
isoform B protein.
Length = 1301
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 527 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLC-AIAQAE 390
+LG+ G+R+RE+ V R NIP QS E +E + G IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227
>AE013599-2686|AAS64809.1| 1301|Drosophila melanogaster CG5170-PA,
isoform A protein.
Length = 1301
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -3
Query: 527 VLGEKGRRIRELTSVVQKRFNIPEQSVELYAERVATRGLC-AIAQAE 390
+LG+ G+R+RE+ V R NIP QS E +E + G IAQAE
Sbjct: 183 ILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIAQAE 227
>AE014297-610|AAF54020.1| 693|Drosophila melanogaster CG10101-PA
protein.
Length = 693
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 432 FSIQFYR--LLWNVESLLYYGSQLTDSASFLSEHTL 533
+ +QFYR + N E L++YGS T SEH L
Sbjct: 103 YRVQFYRPEMSANFEDLMFYGSPRTAVLVLNSEHVL 138
>M77166-1|AAA28528.1| 873|Drosophila melanogaster fasciclin II
protein.
Length = 873
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 110 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 24
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>M77165-1|AAA28527.1| 811|Drosophila melanogaster fasciclin II
protein.
Length = 811
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 110 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 24
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>BT014661-1|AAT27285.1| 773|Drosophila melanogaster GH15080p
protein.
Length = 773
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 110 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 24
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>AL033125-2|CAA21826.1| 850|Drosophila melanogaster
EG:EG0007.3,FBgn0000635;Fas2 protein.
Length = 850
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 110 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 24
++ P++P+P H V K+EPV + P S+
Sbjct: 599 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 627
>AL033125-1|CAA21825.1| 788|Drosophila melanogaster
EG:EG0007.3,FBgn0000635;Fas2 protein.
Length = 788
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 110 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 24
++ P++P+P H V K+EPV + P S+
Sbjct: 599 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 627
>AE014298-607|AAN09119.1| 811|Drosophila melanogaster CG3665-PC,
isoform C protein.
Length = 811
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 110 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 24
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>AE014298-606|AAN09118.1| 773|Drosophila melanogaster CG3665-PB,
isoform B protein.
Length = 773
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 110 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 24
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>AE014298-605|AAF45925.2| 873|Drosophila melanogaster CG3665-PA,
isoform A protein.
Length = 873
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 110 KNGPKKPQPDHILVTEPKDEPVPLEPTSE 24
++ P++P+P H V K+EPV + P S+
Sbjct: 622 RSAPEEPKPLHNPVQHDKEEPVVVSPYSD 650
>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p
protein.
Length = 1031
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -2
Query: 348 CLLWCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRWTHDPLWRPLQ*LRQHCYQTCA 172
C C HH + C CI + WS + +EVC P +HC TCA
Sbjct: 707 CAQRCRCVHHKV-CRKADGMCICETGWSGTRCDEVC---------PEGFYGEHCMNTCA 755
>BT014632-1|AAT27256.1| 2112|Drosophila melanogaster SD12316p protein.
Length = 2112
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 296 HNHGHQIP**NGEHHSKHDVQRDLR 370
H+HGH + N HH++H Q+ L+
Sbjct: 1961 HSHGHDLAAINYNHHNRHHQQQLLK 1985
>AY089510-1|AAL90248.1| 697|Drosophila melanogaster GH20325p
protein.
Length = 697
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 179 HVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 27
H+L+ + G+ + + P +GK P + Q HI EP+D LEPT+
Sbjct: 647 HLLIEAPIGGLDI-FLRP---KGKISPTEKQTSHIDDKEPRDPENLLEPTT 693
>AY058603-1|AAL13832.1| 1553|Drosophila melanogaster LD29482p protein.
Length = 1553
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 296 HNHGHQIP**NGEHHSKHDVQRDLR 370
H+HGH + N HH++H Q+ L+
Sbjct: 1402 HSHGHDLAAINYNHHNRHHQQQLLK 1426
>AY051977-1|AAK93401.1| 931|Drosophila melanogaster LD44526p
protein.
Length = 931
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 117 ARQERPEEATTRPHPGNRAQGRARAPRADQRSALPRAR 4
+R RP++ T P+ NRAQ R + + +L RAR
Sbjct: 159 SRLARPQKPDTLPNALNRAQSVQRLTQVQRTPSLSRAR 196
>AY032851-1|AAK51129.1| 960|Drosophila melanogaster Cornetto
protein.
Length = 960
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 117 ARQERPEEATTRPHPGNRAQGRARAPRADQRSALPRAR 4
+R RP++ T P+ NRAQ R + + +L RAR
Sbjct: 188 SRLARPQKPDTLPNALNRAQSVQRLTQVQRTPSLSRAR 225
>AL031028-1|CAA19845.2| 1795|Drosophila melanogaster EG:56G7.1
protein.
Length = 1795
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 477 LYYGSQLTDSASFLSEHTLCPGGHNNDL 560
LYY +L +S ++L CPG ++ DL
Sbjct: 235 LYYTCRLQESGTYLQTRFKCPGSNSFDL 262
>AF145617-1|AAD38592.1| 594|Drosophila melanogaster BcDNA.GH03529
protein.
Length = 594
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -2
Query: 348 CLLWCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRWTHDPLWRPLQ*LRQHCYQTCA 172
C C HH + C CI + WS + +EVC P +HC TCA
Sbjct: 259 CAQRCRCVHHKV-CRKADGMCICETGWSGTRCDEVC---------PEGFYGEHCMNTCA 307
>AE014298-3031|AAF50897.2| 2181|Drosophila melanogaster CG1412-PA
protein.
Length = 2181
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 296 HNHGHQIP**NGEHHSKHDVQRDLR 370
H+HGH + N HH++H Q+ L+
Sbjct: 2030 HSHGHDLAAINYNHHNRHHQQQLLK 2054
>AE014298-231|AAF45644.1| 1795|Drosophila melanogaster CG14796-PA
protein.
Length = 1795
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 477 LYYGSQLTDSASFLSEHTLCPGGHNNDL 560
LYY +L +S ++L CPG ++ DL
Sbjct: 235 LYYTCRLQESGTYLQTRFKCPGSNSFDL 262
>AE014296-1202|AAF50605.2| 960|Drosophila melanogaster CG32386-PA
protein.
Length = 960
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 117 ARQERPEEATTRPHPGNRAQGRARAPRADQRSALPRAR 4
+R RP++ T P+ NRAQ R + + +L RAR
Sbjct: 188 SRLARPQKPDTLPNALNRAQSVQRLTQVQRTPSLSRAR 225
>AE014296-337|AAF47553.2| 881|Drosophila melanogaster CG2086-PB,
isoform B protein.
Length = 881
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -2
Query: 348 CLLWCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRWTHDPLWRPLQ*LRQHCYQTCA 172
C C HH + C CI + WS + +EVC P +HC TCA
Sbjct: 546 CAQRCRCVHHKV-CRKADGMCICETGWSGTRCDEVC---------PEGFYGEHCMNTCA 594
>AE014296-336|AAF47552.1| 594|Drosophila melanogaster CG2086-PA,
isoform A protein.
Length = 594
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = -2
Query: 348 CLLWCSPFHHGIWCPWL*SCCIWQAAWSTCQINEVCRWTHDPLWRPLQ*LRQHCYQTCA 172
C C HH + C CI + WS + +EVC P +HC TCA
Sbjct: 259 CAQRCRCVHHKV-CRKADGMCICETGWSGTRCDEVC---------PEGFYGEHCMNTCA 307
>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
isoform A protein.
Length = 2190
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 321 DETENTIASTTYSETSDKLVS*RFGLGDSAKTTSSHP 431
DET T +ST+Y+ T + +A+ T+SHP
Sbjct: 1464 DETNKTSSSTSYTTTESTYIQPSTSTYLNAEVTTSHP 1500
>AE013599-1631|AAF58428.1| 697|Drosophila melanogaster CG13325-PA
protein.
Length = 697
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = -3
Query: 179 HVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTS 27
H+L+ + G+ + + P +GK P + Q HI EP+D LEPT+
Sbjct: 647 HLLIEAPIGGLDI-FLRP---KGKISPTEKQTSHIDDKEPRDPENLLEPTT 693
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,211,862
Number of Sequences: 53049
Number of extensions: 633461
Number of successful extensions: 2820
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 2301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2820
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -