Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15g10
         (317 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051624-1|AAK93048.1|  648|Drosophila melanogaster GH27269p pro...    31   0.32 
AE014297-95|AAF52123.1|  970|Drosophila melanogaster CG14650-PA ...    31   0.32 
BT014660-1|AAT27284.1| 1357|Drosophila melanogaster LD09358p pro...    27   3.9  
AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA...    27   3.9  
AE014297-329|AAF51971.2| 1264|Drosophila melanogaster CG1347-PA,...    27   3.9  
AE014297-328|AAS65100.1| 1357|Drosophila melanogaster CG1347-PB,...    27   3.9  
AE014297-4276|AAF56821.3| 2180|Drosophila melanogaster CG31048-P...    27   6.9  

>AY051624-1|AAK93048.1|  648|Drosophila melanogaster GH27269p
           protein.
          Length = 648

 Score = 31.1 bits (67), Expect = 0.32
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +2

Query: 41  TLLC*TTTRRHSREL*--PHENARSCASCE 124
           T+ C T  +RH R+L   PH  AR CASC+
Sbjct: 480 TIRCSTCAQRHPRKLTERPHYAARECASCK 509


>AE014297-95|AAF52123.1|  970|Drosophila melanogaster CG14650-PA
           protein.
          Length = 970

 Score = 31.1 bits (67), Expect = 0.32
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +2

Query: 41  TLLC*TTTRRHSREL*--PHENARSCASCE 124
           T+ C T  +RH R+L   PH  AR CASC+
Sbjct: 802 TIRCSTCAQRHPRKLTERPHYAARECASCK 831


>BT014660-1|AAT27284.1| 1357|Drosophila melanogaster LD09358p
           protein.
          Length = 1357

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -2

Query: 259 KIFHRADDICSELVYMQAYLENVVSEI*ASFKYLA--FCDGYHHTCSFTGR 113
           ++  + +D C  LV+ Q   +   S + A+ + L   FCD + + CSF  R
Sbjct: 123 ELARKEEDQCERLVHEQHLQQQGWSAVVANMEDLTNEFCDRFQNFCSFFDR 173


>AE014298-877|AAF46154.1| 1543|Drosophila melanogaster CG15894-PA
           protein.
          Length = 1543

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 57  PPPADTLESCDRTRTPAAARP 119
           PPPA    S +R+RTP  +RP
Sbjct: 599 PPPAPGSGSTNRSRTPVGSRP 619


>AE014297-329|AAF51971.2| 1264|Drosophila melanogaster CG1347-PA,
           isoform A protein.
          Length = 1264

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -2

Query: 259 KIFHRADDICSELVYMQAYLENVVSEI*ASFKYLA--FCDGYHHTCSFTGR 113
           ++  + +D C  LV+ Q   +   S + A+ + L   FCD + + CSF  R
Sbjct: 123 ELARKEEDQCERLVHEQHLQQQGWSAVVANMEDLTNEFCDRFQNFCSFFDR 173


>AE014297-328|AAS65100.1| 1357|Drosophila melanogaster CG1347-PB,
           isoform B protein.
          Length = 1357

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -2

Query: 259 KIFHRADDICSELVYMQAYLENVVSEI*ASFKYLA--FCDGYHHTCSFTGR 113
           ++  + +D C  LV+ Q   +   S + A+ + L   FCD + + CSF  R
Sbjct: 123 ELARKEEDQCERLVHEQHLQQQGWSAVVANMEDLTNEFCDRFQNFCSFFDR 173


>AE014297-4276|AAF56821.3| 2180|Drosophila melanogaster CG31048-PA
            protein.
          Length = 2180

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 298  KLGHQFGEIYDKGKIFHRADDICSELVYM 212
            +L H+  + +DKGK + +   +C EL ++
Sbjct: 1303 RLYHEILKYFDKGKCWEKGIPLCKELAHL 1331


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,896,184
Number of Sequences: 53049
Number of extensions: 284985
Number of successful extensions: 737
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)