Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15g07
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022481-1|AAY54897.1|  163|Drosophila melanogaster IP06044p pro...    31   1.4  
AE013599-2368|AAF57937.2|  163|Drosophila melanogaster CG6435-PA...    31   1.4  
BT022757-1|AAY55173.1| 1257|Drosophila melanogaster LD10349p pro...    29   4.4  
AY060994-1|AAL28542.1|  623|Drosophila melanogaster HL01216p pro...    29   4.4  
AE014134-2292|AAF53254.1| 1257|Drosophila melanogaster CG16974-P...    29   4.4  
BT024325-1|ABC86387.1|  399|Drosophila melanogaster IP10749p pro...    29   5.8  
AY268066-1|AAQ56702.1|  617|Drosophila melanogaster UDP-GalNAc:p...    29   5.8  
AE013599-1354|AAF58610.1|  384|Drosophila melanogaster CG13190-P...    29   5.8  
BT023796-1|AAZ41805.1|  621|Drosophila melanogaster AT30049p pro...    28   7.7  
AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-P...    28   7.7  
AE014297-4551|AAF57015.4| 1097|Drosophila melanogaster CG31028-P...    28   7.7  
AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-P...    28   7.7  

>BT022481-1|AAY54897.1|  163|Drosophila melanogaster IP06044p
           protein.
          Length = 163

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 566 SSTFLSDDTFLLMPCTNPPAHTSNCYNNSIYKEGRWVANTDSSQCIDFSNYKEL 405
           + T LS+D F    C N P   +N   N ++K G+     +   C+DF    +L
Sbjct: 71  TDTALSEDAFT--NCVNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKL 122


>AE013599-2368|AAF57937.2|  163|Drosophila melanogaster CG6435-PA
           protein.
          Length = 163

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 566 SSTFLSDDTFLLMPCTNPPAHTSNCYNNSIYKEGRWVANTDSSQCIDFSNYKEL 405
           + T LS+D F    C N P   +N   N ++K G+     +   C+DF    +L
Sbjct: 71  TDTALSEDAFT--NCVNQPHCAANTVQNYMFKHGQDCNGDEHIDCLDFGALHKL 122


>BT022757-1|AAY55173.1| 1257|Drosophila melanogaster LD10349p
           protein.
          Length = 1257

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 112 LRFLTIQYKNKITINTITKVAT*PNMNEVNLAAN 213
           LR+L++Q   K+T    T  A  PN+ E+ LA N
Sbjct: 478 LRYLSVQQNRKLTYLPATLFANTPNIRELLLAEN 511


>AY060994-1|AAL28542.1|  623|Drosophila melanogaster HL01216p
           protein.
          Length = 623

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 112 LRFLTIQYKNKITINTITKVAT*PNMNEVNLAAN 213
           LR+L++Q   K+T    T  A  PN+ E+ LA N
Sbjct: 200 LRYLSVQQNRKLTYLPATLFANTPNIRELLLAEN 233


>AE014134-2292|AAF53254.1| 1257|Drosophila melanogaster CG16974-PA
           protein.
          Length = 1257

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 112 LRFLTIQYKNKITINTITKVAT*PNMNEVNLAAN 213
           LR+L++Q   K+T    T  A  PN+ E+ LA N
Sbjct: 478 LRYLSVQQNRKLTYLPATLFANTPNIRELLLAEN 511


>BT024325-1|ABC86387.1|  399|Drosophila melanogaster IP10749p
           protein.
          Length = 399

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 203 WRPIRLQPWK*CRSDWCRRRQTWCSPWWL*DCFFVG 310
           W  ++++P    R DW    +T    WW+  CF +G
Sbjct: 248 WVDLQIRPMFMSRLDWPEHNRTEALKWWV-KCFLLG 282


>AY268066-1|AAQ56702.1|  617|Drosophila melanogaster
           UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase
           protein.
          Length = 617

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 6/48 (12%)
 Frame = -2

Query: 554 LSDDTFLLMPCTNPPAHTSNCYNNS-----IYK-EGRWVANTDSSQCI 429
           +SDD  L    +N P +   C+N       +Y  E +W+ +T+S QC+
Sbjct: 535 MSDDLCLDASSSNGPVNMVRCHNMGGNQEWVYDAEEKWIRHTNSGQCL 582


>AE013599-1354|AAF58610.1|  384|Drosophila melanogaster CG13190-PA
           protein.
          Length = 384

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 203 WRPIRLQPWK*CRSDWCRRRQTWCSPWWL*DCFFVG 310
           W  ++++P    R DW    +T    WW+  CF +G
Sbjct: 233 WVDLQIRPMFMSRLDWPEHNRTEALKWWV-KCFLLG 267


>BT023796-1|AAZ41805.1|  621|Drosophila melanogaster AT30049p
           protein.
          Length = 621

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -1

Query: 360 HNLSRQLERCQRLVVYCPTKKQSHNHHGEHQVWRRRHQSE 241
           H+L +Q E+ Q   V+ P     H+H  +H + +++ Q +
Sbjct: 37  HHLQQQQEQQQSHAVFVPNHSGLHHHQQQHLLQQQQQQHQ 76


>AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-PB,
            isoform B protein.
          Length = 1109

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +3

Query: 186  HERSQFGGQFAFSHGSDVVQTGADAAKLGVLHGGYEIAFLLGNKRPTAGIFPTVVIGCVA 365
            HER+QF  +     G        DA K   LHGG  I  ++  K P A      +   +A
Sbjct: 1009 HERAQFLDELRSVMGIPEWMLDVDARKTKELHGGACIQMIIHFKGPLAHRLELDMSRLIA 1068

Query: 366  DGR 374
             GR
Sbjct: 1069 AGR 1071


>AE014297-4551|AAF57015.4| 1097|Drosophila melanogaster CG31028-PA,
            isoform A protein.
          Length = 1097

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +3

Query: 186  HERSQFGGQFAFSHGSDVVQTGADAAKLGVLHGGYEIAFLLGNKRPTAGIFPTVVIGCVA 365
            HER+QF  +     G        DA K   LHGG  I  ++  K P A      +   +A
Sbjct: 997  HERAQFLDELRSVMGIPEWMLDVDARKTKELHGGACIQMIIHFKGPLAHRLELDMSRLIA 1056

Query: 366  DGR 374
             GR
Sbjct: 1057 AGR 1059


>AE014297-3396|AAF56194.2| 2072|Drosophila melanogaster CG10192-PA
           protein.
          Length = 2072

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -1

Query: 360 HNLSRQLERCQRLVVYCPTKKQSHNHHGEHQVWRRRHQSE 241
           H+L +Q E+ Q   V+ P     H+H  +H + +++ Q +
Sbjct: 37  HHLQQQQEQQQSHAVFVPNHSGLHHHQQQHLLQQQQQQHQ 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,548,399
Number of Sequences: 53049
Number of extensions: 486796
Number of successful extensions: 2240
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2188
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)