Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15g01
(327 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15 p... 136 2e-32
BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15 p... 134 6e-32
BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15 p... 134 6e-32
BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15 p... 134 6e-32
BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15 p... 134 6e-32
BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA 2... 134 6e-32
BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15 p... 134 6e-32
AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15 p... 134 6e-32
AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens ... 134 6e-32
AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L... 134 8e-32
AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15 p... 132 2e-31
L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10 pro... 129 2e-30
BC081565-1|AAH81565.1| 145|Homo sapiens RPL15 protein protein. 73 3e-13
AK130852-1|BAC85447.1| 416|Homo sapiens protein ( Homo sapiens ... 31 0.63
AK128364-1|BAC87400.1| 168|Homo sapiens protein ( Homo sapiens ... 29 2.5
S70004-1|AAB30886.1| 703|Homo sapiens glycogen synthase protein. 28 7.7
D29685-1|BAA06154.1| 704|Homo sapiens liver glycogen synthase p... 28 7.7
BC126312-1|AAI26313.1| 703|Homo sapiens glycogen synthase 2 (li... 28 7.7
BC126310-1|AAI26311.1| 703|Homo sapiens glycogen synthase 2 (li... 28 7.7
AJ003087-1|CAA05859.1| 703|Homo sapiens liver glycogen synthase... 28 7.7
>AL355137-1|CAI14965.1| 204|Homo sapiens ribosomal protein L15
pseudogene 3 protein.
Length = 204
Score = 136 bits (328), Expect = 2e-32
Identities = 61/90 (67%), Positives = 68/90 (75%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EERVG CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERVGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>BT019672-1|AAV38478.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 134 bits (324), Expect = 6e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>BC071672-1|AAH71672.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 134 bits (324), Expect = 6e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>BC070328-1|AAH70328.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 134 bits (324), Expect = 6e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>BC068198-1|AAH68198.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 134 bits (324), Expect = 6e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>BC030575-1|AAH30575.1| 219|Homo sapiens Similar to RIKEN cDNA
2510008H07 gene protein.
Length = 219
Score = 134 bits (324), Expect = 6e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 89 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 148
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 149 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 178
>BC014837-1|AAH14837.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 134 bits (324), Expect = 6e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>AY347528-1|AAQ24859.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 134 bits (324), Expect = 6e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>AF283772-1|AAG15591.1| 204|Homo sapiens protein ( Homo sapiens
clone TCBAP0781 mRNA sequence. ).
Length = 204
Score = 134 bits (324), Expect = 6e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>AF279903-1|AAG44837.1| 204|Homo sapiens 60S ribosomal protein L15
protein.
Length = 204
Score = 134 bits (323), Expect = 8e-32
Identities = 60/90 (66%), Positives = 67/90 (74%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK+FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSLAEERAGRHCGALRVLNSYWVGEDSTYKFFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>AB061823-1|BAB79461.1| 204|Homo sapiens ribosomal protein L15
protein.
Length = 204
Score = 132 bits (319), Expect = 2e-31
Identities = 60/90 (66%), Positives = 66/90 (73%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKAFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI VHKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPVHKHREMRG 163
>L25899-1|AAA36583.1| 205|Homo sapiens ribosomal protein L10
protein.
Length = 205
Score = 129 bits (312), Expect = 2e-30
Identities = 59/90 (65%), Positives = 65/90 (72%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDSSYKYFEVI 92
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S WV +DS+YK FEVI
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKAFEVI 133
Query: 91 LVDPSHKAIRRDXKINWIVNAVHKHREMXG 2
L+DP HKAIRR+ WI HKHREM G
Sbjct: 134 LIDPFHKAIRRNPDTQWITKPDHKHREMRG 163
>BC081565-1|AAH81565.1| 145|Homo sapiens RPL15 protein protein.
Length = 145
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/52 (63%), Positives = 36/52 (69%)
Frame = -3
Query: 271 PVAKGATYGKPKSHGVNQLKPTRNXQSIXEERVGXRCGGLRVLXSXWVAQDS 116
PV KGATYGKP HGVNQLK R+ QS+ EER G CG LRVL S W+ S
Sbjct: 74 PVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWMESHS 125
>AK130852-1|BAC85447.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ27342 fis, clone TST02993. ).
Length = 416
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -2
Query: 287 WWPQASSC*GCHLWQAQEPWCQPVEAHAQXSIHX*GACWXSLRWSPCVEXLXGCTG 120
W P S GC + +P C P EA + + A L+W P ++ + GC+G
Sbjct: 13 WRPSLQSIRGC----SGDPACSPSEAAVETQL----AVHQRLQWRPSLQSIRGCSG 60
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -2
Query: 287 WWPQASSC*GCHLWQAQEPWCQPVEAHAQXSIHX*GACWXSLRWSPCVEXLXGCTG 120
W P S GC + +P C P EA + + A L W P ++ + GC+G
Sbjct: 118 WRPSLQSIRGC----SGDPACSPSEAAVETQL----AAHQRLEWRPNLQPIRGCSG 165
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -2
Query: 287 WWPQASSC*GCHLWQAQEPWCQPVEAHAQXSIHX*GACWXSLRWSPCVEXLXGCTG 120
W P S G W +P C+P EA + + A L+W P ++ + GC+G
Sbjct: 83 WRPSLQSIRG---WSG-DPACRPSEAAVETQL----AVHQRLQWRPSLQSIRGCSG 130
>AK128364-1|BAC87400.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ46507 fis, clone THYMU3031146. ).
Length = 168
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 1/61 (1%)
Frame = -2
Query: 182 GACWXSLR-WSPCVEXLXGCTGFFIQVFRGYPRGPVTQGHSSRS*DQLDRECCT*ASXDX 6
G CW L+ W P + C+ + G RGP G + + DR C
Sbjct: 9 GFCWRCLKSWKPNHKDYYNCSAMVRRWALGEGRGPEPSGRGAATRSWADRAPCAVQHSSC 68
Query: 5 W 3
W
Sbjct: 69 W 69
>S70004-1|AAB30886.1| 703|Homo sapiens glycogen synthase protein.
Length = 703
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 209 GLQLVDTMALGLAISGTLSNWTLAATTSHTDSXYNITLF 325
G+ D A + I G+L+ W L T H D Y + F
Sbjct: 141 GIPYHDREANDMLIFGSLTAWFLKEVTDHADGKYVVAQF 179
>D29685-1|BAA06154.1| 704|Homo sapiens liver glycogen synthase
protein.
Length = 704
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 209 GLQLVDTMALGLAISGTLSNWTLAATTSHTDSXYNITLF 325
G+ D A + I G+L+ W L T H D Y + F
Sbjct: 141 GIPYHDREANDMLIFGSLTAWFLKEVTDHADGKYVVARF 179
>BC126312-1|AAI26313.1| 703|Homo sapiens glycogen synthase 2
(liver) protein.
Length = 703
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 209 GLQLVDTMALGLAISGTLSNWTLAATTSHTDSXYNITLF 325
G+ D A + I G+L+ W L T H D Y + F
Sbjct: 141 GIPYHDREANDMLIFGSLTAWFLKEVTDHADGKYVVAQF 179
>BC126310-1|AAI26311.1| 703|Homo sapiens glycogen synthase 2
(liver) protein.
Length = 703
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 209 GLQLVDTMALGLAISGTLSNWTLAATTSHTDSXYNITLF 325
G+ D A + I G+L+ W L T H D Y + F
Sbjct: 141 GIPYHDREANDMLIFGSLTAWFLKEVTDHADGKYVVAQF 179
>AJ003087-1|CAA05859.1| 703|Homo sapiens liver glycogen synthase
protein.
Length = 703
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 209 GLQLVDTMALGLAISGTLSNWTLAATTSHTDSXYNITLF 325
G+ D A + I G+L+ W L T H D Y + F
Sbjct: 141 GIPYHDREANDMLIFGSLTAWFLKEVTDHADGKYVVAQF 179
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,629,606
Number of Sequences: 237096
Number of extensions: 678845
Number of successful extensions: 4898
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4898
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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