Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15f14
         (519 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86864-1|BAA24070.1|  830|Homo sapiens acetyl LDL receptor protein.    29   9.8  
D63483-1|BAA09770.1|  830|Homo sapiens KIAA0149 protein.               29   9.8  
BC039735-1|AAH39735.1|  830|Homo sapiens scavenger receptor clas...    29   9.8  
BC027993-1|AAH27993.1|  627|Homo sapiens CAPN9 protein protein.        29   9.8  
AY874864-1|AAW49735.1|  690|Homo sapiens calpain 9 protein.            29   9.8  
AL591291-2|CAI17215.1|  664|Homo sapiens calpain 9 protein.            29   9.8  
AL591291-1|CAI17214.1|  690|Homo sapiens calpain 9 protein.            29   9.8  
AL512328-3|CAI14866.1|  664|Homo sapiens calpain 9 protein.            29   9.8  
AL512328-2|CAI14865.1|  690|Homo sapiens calpain 9 protein.            29   9.8  
AF022799-1|AAB80762.1|  690|Homo sapiens digestive tract-specifi...    29   9.8  
AB052949-1|BAC02695.1|  337|Homo sapiens SREC-4 protein.               29   9.8  
AB052948-1|BAC02694.1|  569|Homo sapiens SREC-3 protein.               29   9.8  
AB052947-1|BAC02693.1|  342|Homo sapiens SREC-2 protein.               29   9.8  
AB052946-1|BAC02692.1|  830|Homo sapiens SREC protein.                 29   9.8  
AB038463-1|BAA92137.1|  664|Homo sapiens GC36 protein.                 29   9.8  

>D86864-1|BAA24070.1|  830|Homo sapiens acetyl LDL receptor protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 494 TXRQDCEKRAP--RNGAAGQPHGGHCARRD 411
           T  + CE++ P  R+G A +P  GHC R D
Sbjct: 301 TFGESCEQQCPHCRHGEACEPDTGHCQRCD 330


>D63483-1|BAA09770.1|  830|Homo sapiens KIAA0149 protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 494 TXRQDCEKRAP--RNGAAGQPHGGHCARRD 411
           T  + CE++ P  R+G A +P  GHC R D
Sbjct: 301 TFGESCEQQCPHCRHGEACEPDTGHCQRCD 330


>BC039735-1|AAH39735.1|  830|Homo sapiens scavenger receptor class
           F, member 1 protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 494 TXRQDCEKRAP--RNGAAGQPHGGHCARRD 411
           T  + CE++ P  R+G A +P  GHC R D
Sbjct: 301 TFGESCEQQCPHCRHGEACEPDTGHCQRCD 330


>BC027993-1|AAH27993.1|  627|Homo sapiens CAPN9 protein protein.
          Length = 627

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 400 SNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 284
           +NPQ+  SL   D G  E +FL    +   R LKR G+N
Sbjct: 313 TNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN 351


>AY874864-1|AAW49735.1|  690|Homo sapiens calpain 9 protein.
          Length = 690

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 400 SNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 284
           +NPQ+  SL   D G  E +FL    +   R LKR G+N
Sbjct: 376 TNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN 414


>AL591291-2|CAI17215.1|  664|Homo sapiens calpain 9 protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 400 SNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 284
           +NPQ+  SL   D G  E +FL    +   R LKR G+N
Sbjct: 350 TNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN 388


>AL591291-1|CAI17214.1|  690|Homo sapiens calpain 9 protein.
          Length = 690

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 400 SNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 284
           +NPQ+  SL   D G  E +FL    +   R LKR G+N
Sbjct: 376 TNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN 414


>AL512328-3|CAI14866.1|  664|Homo sapiens calpain 9 protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 400 SNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 284
           +NPQ+  SL   D G  E +FL    +   R LKR G+N
Sbjct: 350 TNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN 388


>AL512328-2|CAI14865.1|  690|Homo sapiens calpain 9 protein.
          Length = 690

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 400 SNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 284
           +NPQ+  SL   D G  E +FL    +   R LKR G+N
Sbjct: 376 TNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN 414


>AF022799-1|AAB80762.1|  690|Homo sapiens digestive tract-specific
           calpain protein.
          Length = 690

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 400 SNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 284
           +NPQ+  SL   D G  E +FL    +   R LKR G+N
Sbjct: 376 TNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN 414


>AB052949-1|BAC02695.1|  337|Homo sapiens SREC-4 protein.
          Length = 337

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 494 TXRQDCEKRAP--RNGAAGQPHGGHCARRD 411
           T  + CE++ P  R+G A +P  GHC R D
Sbjct: 301 TFGESCEQQCPHCRHGEACEPDTGHCQRCD 330


>AB052948-1|BAC02694.1|  569|Homo sapiens SREC-3 protein.
          Length = 569

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 494 TXRQDCEKRAP--RNGAAGQPHGGHCARRD 411
           T  + CE++ P  R+G A +P  GHC R D
Sbjct: 301 TFGESCEQQCPHCRHGEACEPDTGHCQRCD 330


>AB052947-1|BAC02693.1|  342|Homo sapiens SREC-2 protein.
          Length = 342

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 494 TXRQDCEKRAP--RNGAAGQPHGGHCARRD 411
           T  + CE++ P  R+G A +P  GHC R D
Sbjct: 301 TFGESCEQQCPHCRHGEACEPDTGHCQRCD 330


>AB052946-1|BAC02692.1|  830|Homo sapiens SREC protein.
          Length = 830

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -2

Query: 494 TXRQDCEKRAP--RNGAAGQPHGGHCARRD 411
           T  + CE++ P  R+G A +P  GHC R D
Sbjct: 301 TFGESCEQQCPHCRHGEACEPDTGHCQRCD 330


>AB038463-1|BAA92137.1|  664|Homo sapiens GC36 protein.
          Length = 664

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 400 SNPQLCHSLAVCDVGNNEFAFLRPQKRSLGRSLKRLGSN 284
           +NPQ+  SL   D G  E +FL    +   R LKR G+N
Sbjct: 350 TNPQIKLSLTEKDEGQEECSFLVALMQKDRRKLKRFGAN 388


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,138,134
Number of Sequences: 237096
Number of extensions: 1214796
Number of successful extensions: 3100
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3100
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)