Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15f05
(550 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 116 9e-27
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 113 9e-26
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 113 1e-25
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 112 2e-25
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 112 2e-25
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 112 2e-25
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 112 2e-25
06_03_1149 + 28018932-28020529,28020989-28021067 112 2e-25
05_01_0438 + 3475017-3475484 112 2e-25
04_04_1238 + 31997671-31998816 112 2e-25
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 112 2e-25
02_01_0464 - 3340642-3342015,3342403-3342405 112 2e-25
01_06_0031 + 25760878-25761342 112 2e-25
01_03_0108 - 12628711-12629178 112 2e-25
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 111 4e-25
09_04_0554 + 18495073-18495175,18495794-18496032 111 5e-25
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 109 1e-24
01_06_0033 + 25765300-25765758 99 2e-21
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 81 1e-20
05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 88 4e-18
10_08_0470 - 18151326-18151769 86 2e-17
07_03_0447 + 18301421-18301520,18301900-18302060 82 2e-16
08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137 79 2e-15
08_01_0566 - 5028512-5029150 79 3e-15
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 66 2e-11
10_08_0796 + 20643667-20643912 58 3e-09
10_08_0361 + 17207657-17207701,17208850-17209773 53 1e-07
12_01_1007 - 10208034-10208165,10208376-10208480,10208612-102086... 52 2e-07
10_02_0200 - 6672743-6673717,6676257-6676634,6677017-6677301,667... 51 7e-07
03_06_0392 - 33583375-33583554,33583646-33584126,33584211-33584452 50 1e-06
09_04_0070 + 14308446-14308511,14308844-14309005,14309420-143094... 49 3e-06
08_02_0067 - 11863092-11863104,11863432-11863547,11863610-118639... 48 4e-06
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 48 7e-06
11_03_0129 - 10447736-10448356,10450418-10450504,10450632-104507... 47 1e-05
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 47 1e-05
08_02_0751 + 20789843-20789908,20791152-20791313,20791516-207915... 42 2e-04
12_01_1006 - 10206188-10206469 40 0.002
02_02_0500 - 10993675-10994067,10994434-10995738 40 0.002
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 39 0.003
09_04_0560 - 18519024-18519145,18519330-18519435,18519671-185199... 38 0.007
06_01_0365 + 2606873-2607787 36 0.021
03_02_0430 + 8381641-8381743,8382799-8382956 36 0.028
03_03_0045 - 14029375-14029400,14029515-14029547,14030407-140304... 35 0.037
07_01_1044 - 9104013-9104138,9104293-9104467,9105134-9105183,910... 34 0.065
06_02_0244 - 13445023-13445400,13445495-13446823 33 0.11
05_07_0314 + 29162075-29163436,29163520-29163900,29164911-29165441 33 0.15
01_04_0003 - 14989160-14989445,14989673-14989807,14991418-149915... 29 1.8
01_01_0931 - 7351306-7351371,7351620-7351772,7352343-7352484,735... 29 2.4
08_01_1029 - 10419090-10419476,10419721-10419822,10420367-104204... 29 3.2
04_04_0281 + 24121267-24121537,24122567-24122799 29 3.2
02_04_0476 + 23248222-23248495,23249558-23249790 28 4.3
05_01_0155 + 1043045-1043240,1043325-1043401,1043963-1044092,104... 28 5.6
10_08_0265 - 16321752-16321946,16322048-16322385,16322536-16322770 27 7.5
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348... 27 7.5
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 27 9.9
05_03_0300 + 11969222-11969767 27 9.9
03_06_0475 + 34193951-34194023,34195414-34195486,34195572-341956... 27 9.9
03_04_0139 + 17630316-17630451,17632328-17632354,17632970-176331... 27 9.9
02_04_0347 + 22193708-22193720,22194317-22194390,22195388-221961... 27 9.9
01_01_1150 + 9161058-9162722,9162837-9162920,9163095-9163199,916... 27 9.9
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 116 bits (280), Expect = 9e-27
Identities = 53/78 (67%), Positives = 66/78 (84%)
Frame = -2
Query: 261 PLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQL 82
PL + +VKMQIF+KTLTGK+IT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQL
Sbjct: 104 PLLLLEFAVKMQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL 163
Query: 81 EDSKTMADYNIQKESTLH 28
E+ +T+ADYNIQKESTLH
Sbjct: 164 EEGRTLADYNIQKESTLH 181
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 113 bits (272), Expect = 9e-26
Identities = 55/82 (67%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = -2
Query: 270 SQQPLSFISNSVK-MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFA 94
SQ + + S K MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFA
Sbjct: 27 SQNTVGRLMKSWKQMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFA 86
Query: 93 GKQLEDSKTMADYNIQKESTLH 28
GKQLED +T+ADYNIQKESTLH
Sbjct: 87 GKQLEDGRTLADYNIQKESTLH 108
Score = 105 bits (251), Expect = 3e-23
Identities = 48/68 (70%), Positives = 57/68 (83%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E ++ + ++K KI DKEG+P DQQRLIFA KQLED +T+ADYN
Sbjct: 117 MQIFVKTLTGKTITLAVESSDKIDNVKAKIQDKEGIPPDQQRLIFADKQLEDGRTLADYN 176
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 177 IQKESTLH 184
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 113 bits (271), Expect = 1e-25
Identities = 52/68 (76%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++ VA++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVENSDAVANVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 46
I +KTLTGK I + EP +T+ +K+++ +KEG+P QQRLI+AGKQL D KT DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 45 KESTLH 28
S LH
Sbjct: 139 GGSVLH 144
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 440
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 441 IQKESTLH 448
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 457 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 516
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 517 IQKESTLH 524
>05_01_0438 + 3475017-3475484
Length = 155
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>04_04_1238 + 31997671-31998816
Length = 381
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 111 bits (267), Expect = 4e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVEFSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 2 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 61
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 62 IQKESTLH 69
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 78 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 137
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 138 IQKESTLH 145
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 154 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 213
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 214 IQKESTLH 221
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 230 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 289
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 290 IQKESTLH 297
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 306 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 365
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 366 IQKESTLH 373
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 382 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 441
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 442 IQKESTLH 449
>01_06_0031 + 25760878-25761342
Length = 154
Score = 112 bits (270), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K K+ DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIQNVKAKVQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 71.3 bits (167), Expect = 5e-13
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
+ + ++TLTGK I + E +TV +K+++ ++EG+P QQRLI+ GKQL D KT DY
Sbjct: 77 LNVKVRTLTGKEIDIDIEMTDTVDRIKERVEEREGIPPVQQRLIYGGKQLADDKTAHDYK 136
Query: 51 IQKESTLH 28
I+ S LH
Sbjct: 137 IEAGSVLH 144
>01_03_0108 - 12628711-12629178
Length = 155
Score = 112 bits (270), Expect = 2e-25
Identities = 51/68 (75%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 111 bits (267), Expect = 4e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQL+D +T+ADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 111 bits (266), Expect = 5e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGK+IT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLTGKSITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 109 bits (263), Expect = 1e-24
Identities = 50/68 (73%), Positives = 59/68 (86%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+A YN
Sbjct: 468 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAGYN 527
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 528 IQKESTLH 535
Score = 88.2 bits (209), Expect = 4e-18
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -2
Query: 264 QPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIA-DKEGVPVDQQRLIFAGK 88
QP+ +MQIF+KTLTG TI T++ + + DKEG+P DQQRLIFAGK
Sbjct: 380 QPILQTPTRQQMQIFVKTLTGNTIRLSPLTRLTMSRPRFRTRRDKEGIPPDQQRLIFAGK 439
Query: 87 QLEDSKTMADYNIQKESTLH 28
QL+D +T+ADYNIQKESTLH
Sbjct: 440 QLKDGRTLADYNIQKESTLH 459
>01_06_0033 + 25765300-25765758
Length = 152
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/68 (66%), Positives = 56/68 (82%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTL G+TIT + ++V ++K +I D+EGVP QQRLIFAGKQLED +T+ADYN
Sbjct: 1 MQIFVKTLNGRTITLVVDSCDSVENVKARIHDREGVPPHQQRLIFAGKQLEDGRTLADYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/67 (41%), Positives = 43/67 (64%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 46
I +K LTGK I + EP +T+ +K++I ++EG RL++ GKQL D KT+ +Y+I+
Sbjct: 80 IKVKMLTGKEIDVDIEPTDTMGRIKERIDEREG------RLVYGGKQLADDKTVHEYDIE 133
Query: 45 KESTLHH 25
S L H
Sbjct: 134 AGSVLLH 140
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 80.6 bits (190), Expect = 8e-16
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 46
I +KTLTGK I + EP +T+ +K+++ +KEG+P QQRLI+AGKQL D KT DYNI+
Sbjct: 107 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 166
Query: 45 KESTLH 28
S LH
Sbjct: 167 GGSVLH 172
Score = 73.3 bits (172), Expect(2) = 1e-20
Identities = 32/37 (86%), Positives = 35/37 (94%)
Frame = -2
Query: 138 DKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLH 28
DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH
Sbjct: 60 DKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH 96
Score = 44.0 bits (99), Expect(2) = 1e-20
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKI 142
MQIF+KTLTGKTIT E E ++T+ ++K KI
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKI 30
>05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198
Length = 106
Score = 88.2 bits (209), Expect = 4e-18
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -2
Query: 201 KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLH 28
+ IT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED T+ADYNIQKESTLH
Sbjct: 27 RVITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGCTLADYNIQKESTLH 84
>10_08_0470 - 18151326-18151769
Length = 147
Score = 85.8 bits (203), Expect = 2e-17
Identities = 40/72 (55%), Positives = 51/72 (70%)
Frame = -2
Query: 243 NSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTM 64
++V QIF+K LTGKT EP++TV +K K+ DKEG+P DQQ LIF G QL+D T+
Sbjct: 2 STVMTQIFVKGLTGKTTALRMEPSDTVESVKVKLVDKEGLPPDQQPLIFQGHQLDDGHTL 61
Query: 63 ADYNIQKESTLH 28
Y IQ+ESTLH
Sbjct: 62 IYYGIQEESTLH 73
>07_03_0447 + 18301421-18301520,18301900-18302060
Length = 86
Score = 82.2 bits (194), Expect = 2e-16
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF++TL + IT E E ++T+ D+K KI DK G+P D QRL+ AG+QL+D +T+ADY
Sbjct: 1 MQIFVRTLD-ECITLEVEGSDTIGDVKVKIHDKNGIPADDQRLMHAGRQLDDRRTLADYG 59
Query: 51 IQKESTLHHGVTISEEG 1
IQ E TL + + G
Sbjct: 60 IQTEHTLRLAIRLRRRG 76
>08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137
Length = 174
Score = 79.0 bits (186), Expect = 2e-15
Identities = 45/89 (50%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = -2
Query: 282 ARAHSQQPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRL 103
AR F+ + KMQI +KTLTG TIT E P++T+ D+K KI DK G+ DQQ L
Sbjct: 75 ARIRLLSTCMFVICNNKMQIIVKTLTGITITLEVRPSDTIDDVKAKIQDKVGIRSDQQHL 134
Query: 102 --IFAG-KQLED-SKTMADYNIQKESTLH 28
+ AG KQL+D T+ADY+I ESTLH
Sbjct: 135 VDVSAGSKQLDDGGSTLADYDIHDESTLH 163
>08_01_0566 - 5028512-5029150
Length = 212
Score = 78.6 bits (185), Expect = 3e-15
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF++T+T + E P +TV +K KI K G+P QQRL+FAG+ LED +T+A+Y
Sbjct: 1 MQIFVRTVTAGPLAVEVNPWDTVGKVKAKIQAKGGIPAAQQRLMFAGRHLEDGRTLAEYG 60
Query: 51 IQKESTLH 28
I+KE+ LH
Sbjct: 61 IKKEANLH 68
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 65.7 bits (153), Expect = 2e-11
Identities = 31/71 (43%), Positives = 47/71 (66%)
Frame = -2
Query: 240 SVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMA 61
+ +MQI + L G T T EP++TV +K ++ +K+G+P QQRLIF G+QL+D T+A
Sbjct: 67 ATEMQILVSGLRGNTWTLWVEPSDTVESVKLQLQEKDGLPPCQQRLIFEGRQLDDGDTVA 126
Query: 60 DYNIQKESTLH 28
I+K S L+
Sbjct: 127 SCGIRKHSYLN 137
Score = 62.5 bits (145), Expect = 2e-10
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 8/111 (7%)
Frame = -2
Query: 315 AACCTIPPSVEARA----HSQQPLSFISNSVKMQIFIKTLTGKTITA-ETEPAETVADLK 151
A+C I +EA+ H Q + + + +MQIF++ L GK TA + +P++TV +K
Sbjct: 143 ASCDCIRTHMEAQKLIQEHHQTLTTRPAATDEMQIFVRVLGGKKATALKVQPSDTVGSVK 202
Query: 150 QKI---ADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHHGVTISE 7
K+ K+ +P +QRL+F+G +L D +T+A Y I++ESTL+ + IS+
Sbjct: 203 VKLYYRKKKKTMPC-KQRLVFSGMELADDRTLASYGIEEESTLYLCLQISQ 252
Score = 50.4 bits (115), Expect = 9e-07
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS---KTMA 61
MQI + +TG T+T E EP++TV +K KI G+ D L + GKQ++++ +T+A
Sbjct: 1 MQIPVDLITGATLTLEVEPSDTVESVKAKIKAMSGITED-FGLAYDGKQMDEADGHRTLA 59
Query: 60 DYNIQKEST 34
DY I+ +T
Sbjct: 60 DYGIRDPAT 68
>10_08_0796 + 20643667-20643912
Length = 81
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = -2
Query: 219 IKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKE 40
+KTLTGK + E ETVA +K+++ EG+P QQ LI+ G+QL D T +++
Sbjct: 8 VKTLTGKEVEVSIEATETVARIKEQVEAAEGIPPPQQTLIYGGRQLADDMTAEMCDLRHG 67
Query: 39 STLH 28
S LH
Sbjct: 68 SELH 71
>10_08_0361 + 17207657-17207701,17208850-17209773
Length = 322
Score = 53.2 bits (122), Expect = 1e-07
Identities = 20/75 (26%), Positives = 52/75 (69%)
Frame = -2
Query: 252 FISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDS 73
++++++++ + I ++ GKT + ++AD+K +I +EG+ +++Q L++AG+QLED+
Sbjct: 81 YVTDAIQISVRIPSV-GKTTKLNMRKSNSIADIKAEIEQEEGILMNEQILMYAGQQLEDN 139
Query: 72 KTMADYNIQKESTLH 28
+ ++ +++ + T H
Sbjct: 140 QLLSQCDLRNDQTFH 154
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/87 (31%), Positives = 47/87 (54%)
Frame = -2
Query: 276 AHSQQPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIF 97
+H++QP ++I++K + KT T +TV +K K++ EG+ +Q + F
Sbjct: 3 SHNEQP----PPPKSLKIYVKMM--KTFTLNVNSTDTVDQIKSKLSAIEGIDKSKQEMFF 56
Query: 96 AGKQLEDSKTMADYNIQKESTLHHGVT 16
AG L++ +ADYNI S++ VT
Sbjct: 57 AGMHLKNEDKLADYNIMTNSSVDLYVT 83
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
+Q F+K+ GKT+T + ++T +K +IA+K + L G+ L T+ D+
Sbjct: 239 VQFFVKSWEGKTLTMVLKTSDTGKQIKDRIAEKLRIKESLYYLCHKGRVLLTEDTLLDHE 298
Query: 51 IQKESTLH 28
++ ST++
Sbjct: 299 VESNSTVY 306
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = -2
Query: 234 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLI----FAGKQLEDSKT 67
K+ +FI KTI ET+ TVAD+K I + EG+P Q L G L D +
Sbjct: 162 KLHVFINVRGEKTIGLETKRWYTVADVKLMIENLEGLPACSQILTRMQSGVGVALTDGRM 221
Query: 66 MADYNIQKESTL 31
+ D +++ TL
Sbjct: 222 LQDQHVKNNDTL 233
>12_01_1007 -
10208034-10208165,10208376-10208480,10208612-10208673,
10210820-10211456
Length = 311
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/67 (35%), Positives = 41/67 (61%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
M++ ++T+ G+ T E TV +K+ + +EG+PV+ QRL FAG +L+D Y+
Sbjct: 1 MEVTLETVAGRRFTVEIWFFSTVRRIKEYVLRQEGIPVESQRLFFAGAELDDDGDTERYS 60
Query: 51 IQKESTL 31
I + ST+
Sbjct: 61 ILQGSTV 67
Score = 30.7 bits (66), Expect = 0.80
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Frame = -2
Query: 204 GKTITAETEPAE-TVADLKQKIAD-KEG-VPVDQQRLIFAGKQLEDSKTMADY 55
G +T E + A TVA LK+++ + +G +P + L+F ++ED + +A+Y
Sbjct: 109 GGAVTVEVDAAACTVAGLKERVQEGTDGALPAARVALMFGKVEMEDGRAVAEY 161
>10_02_0200 -
6672743-6673717,6676257-6676634,6677017-6677301,
6677420-6677570,6677696-6677930,6678689-6678764
Length = 699
Score = 50.8 bits (116), Expect = 7e-07
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -2
Query: 231 MQIFIKTLT-GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 55
M+I++K + KTI + + +VAD+K +I KEG+ D Q L++AG+QL+D + ++ +
Sbjct: 427 MRIYVKIPSIAKTIKLIVKNSNSVADVKVEIERKEGILQDNQMLMYAGRQLDDRQILSHF 486
Query: 54 NIQKESTLH 28
+ + LH
Sbjct: 487 GLSDDQILH 495
Score = 37.1 bits (82), Expect = 0.009
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
+QIFIK+ G+T+T +T ++ +KI + + ++ L + G L ++ Y
Sbjct: 580 VQIFIKSWEGRTLTTLVSMFDTAEEIWKKIKKRSQIKAEKYFLCYRGHVLPPGVSLDMYK 639
Query: 51 IQKESTL 31
I+ ST+
Sbjct: 640 IESNSTI 646
Score = 34.7 bits (76), Expect = 0.049
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = -2
Query: 234 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK----QLEDSKT 67
K++IF+ +T+ + E TVAD+K I G P Q L++ +L D++T
Sbjct: 503 KLRIFVNISNRRTVRLDVESWYTVADVKVMIEALLGFPACTQLLMWTNPSVDIELMDTET 562
Query: 66 MADYNIQKESTL 31
+ + N++ + L
Sbjct: 563 LKEQNVKNNTVL 574
>03_06_0392 - 33583375-33583554,33583646-33584126,33584211-33584452
Length = 300
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAET-VADLKQKIADKEGVPVDQQRLIFAGKQLEDS-KTMAD 58
M+I ++TL G + + + A T VA +K + +E + V QRL FAG+ L+D +T+AD
Sbjct: 1 MRIMVRTLRGDRVALDVDGATTTVAQVKGMVMARERIAVAMQRLFFAGRCLDDDHRTLAD 60
Query: 57 YNIQKESTL 31
Y ++ +S +
Sbjct: 61 YGVRHDSVV 69
>09_04_0070 +
14308446-14308511,14308844-14309005,14309420-14309473,
14310009-14310073,14310391-14310459,14310590-14310767,
14311085-14311231,14311316-14311432,14311507-14311619,
14311703-14311781,14311892-14312020
Length = 392
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEG---VPVDQQRLIFAGKQLEDSKTMA 61
M+I +KTL G T E + A+ VAD+K+ I +G P +QQ LI GK L+D T+
Sbjct: 1 MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLD 60
Query: 60 DYNIQKESTL 31
+ + + S L
Sbjct: 61 ENKVLENSFL 70
>08_02_0067 -
11863092-11863104,11863432-11863547,11863610-11863950,
11864978-11865331,11866055-11866150,11866812-11866980,
11867541-11867618,11867745-11867926,11868010-11868094,
11868545-11868648,11869510-11869590,11870123-11870240,
11871299-11871430,11871635-11871788,11871838-11871917
Length = 700
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/74 (33%), Positives = 42/74 (56%)
Frame = -2
Query: 249 ISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSK 70
+++ ++I IKTL +T V LK+KIA G+ +QQRLI G+ L+D +
Sbjct: 97 LNSESTIEIKIKTLDSQTYNLRVNKRVPVPLLKEKIATVTGILSEQQRLICRGRVLKDDE 156
Query: 69 TMADYNIQKESTLH 28
++ Y+++ TLH
Sbjct: 157 LLSAYHVEDGHTLH 170
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 47.6 bits (108), Expect = 7e-06
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 46
+ I+ G T + TV K+ +A VP QQRLI+ G+ L+D +T+ Y ++
Sbjct: 32 LHIRCANGSKFTVRADLDATVGAFKEVVAGSCDVPAAQQRLIYKGRILKDEQTLESYGVE 91
Query: 45 KESTLH 28
+ T+H
Sbjct: 92 TDHTIH 97
>11_03_0129 -
10447736-10448356,10450418-10450504,10450632-10450742,
10453876-10453935,10454262-10454345,10455200-10455298
Length = 353
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = -2
Query: 201 KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLH 28
KTI + ++ VAD+K +I KEG+ +D Q L++AG+ L DS+ +++ + + LH
Sbjct: 163 KTIELSVKKSDIVADVKLQIELKEGIHLDNQILMYAGRHLGDSQILSECGLSDDHILH 220
Score = 29.5 bits (63), Expect = 1.8
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = -2
Query: 249 ISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK----QL 82
+S + KM ++I +T+ + TVAD+K + G P Q L+ +L
Sbjct: 223 VSPADKMCVYINIRDTRTVRVDVRNWYTVADVKLMVETMFGFPECSQILLPTKSGDAIEL 282
Query: 81 EDSKTMADYNIQKESTL 31
++T+ D NI+ + L
Sbjct: 283 NGTQTLKDQNIKNNAVL 299
>03_01_0224 -
1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 46
+ I+ G + + +V K +A+ VP QQRLI+ G+ L+D +T+A Y ++
Sbjct: 729 LHIRCTNGSKLAVRADLGLSVGAFKAIVAESCDVPAPQQRLIYKGRILKDEQTLASYGVE 788
Query: 45 KESTLH 28
+ T+H
Sbjct: 789 TDHTIH 794
>08_02_0751 +
20789843-20789908,20791152-20791313,20791516-20791566,
20792096-20792160,20792385-20792459,20792603-20792780,
20793171-20793353,20793436-20793549,20793627-20793736,
20793826-20793904,20794035-20794172
Length = 406
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEG---VPVDQQRLIFAGKQLEDSKTMA 61
M++ IKTL G + + EP V+D+K+ I +G P DQQ LI G L++ T+
Sbjct: 1 MKVSIKTLKGSSFEIDVEPTSKVSDVKKLIEVTQGDNVYPADQQMLIHQGNVLKNDTTLE 60
Query: 60 DYNI 49
+ +
Sbjct: 61 ENKV 64
>12_01_1006 - 10206188-10206469
Length = 93
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -2
Query: 204 GKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED--SKTMADYNIQKESTL 31
G++ TAE ++ +K + ++EG PV QR F G ++++ T +Y+I K ST+
Sbjct: 19 GRSFTAEIGSTSSLQRMKTAVMNQEGFPVQHQRPFFGGVEMQEKGDDTTREYSIVKGSTI 78
>02_02_0500 - 10993675-10994067,10994434-10995738
Length = 565
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQ---QRLIFAGKQLEDSKTMADY 55
I I+T GK + E V LK K++ + G + QRL+F G++LED++ +AD
Sbjct: 111 ISIETANGKKFQFQVESCCNVGYLKDKLSAESGQQLGSLKDQRLVFDGEELEDNQLIADI 170
Query: 54 NIQKESTLH 28
+ + + +H
Sbjct: 171 SKKGAAVIH 179
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -2
Query: 174 AETVADLKQKIADKEGVPVDQQRLIFAGKQLE-DSKTMADYNIQKESTLHHGVTISE 7
+++VA +K +I +G +QRL+F+G +L ++ + DY + + LH V +++
Sbjct: 51 SDSVASVKLRIQQFKGFVTTKQRLVFSGHELSLNNSHVRDYGLTDGNVLHLVVRLAD 107
>06_03_0924 -
25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADK-EGVPVDQQRLIFAGKQLEDSKTMADY 55
M + TL GK + ET +K K + K E P ++ +L +GK+L+D ++A
Sbjct: 636 MTAIVMTLGGKGVKFLVNAEETPLSVKSKASKKLEFKPSEKIKLFCSGKELQDDISLAMQ 695
Query: 54 NIQKESTLH 28
N++ S LH
Sbjct: 696 NVRPNSILH 704
>09_04_0560 -
18519024-18519145,18519330-18519435,18519671-18519907,
18521371-18521810,18523215-18525012
Length = 900
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = -2
Query: 222 FIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 43
F++ +T++ +TV + +AD+ G D RL++AG+QL +AD +
Sbjct: 83 FVRATDSRTVSMHAAWGDTVGAVLAHLADR-GYGRDL-RLVYAGRQLAPETALADLRLPP 140
Query: 42 ESTLH 28
+STLH
Sbjct: 141 DSTLH 145
>06_01_0365 + 2606873-2607787
Length = 304
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -2
Query: 195 ITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNI 49
+T EP + V ++KQK+ G+PV Q L++ ++L D + Y I
Sbjct: 18 LTVVVEPFDKVVEIKQKVESCYGIPVTAQCLLYWNRELADDHDIEYYPI 66
>03_02_0430 + 8381641-8381743,8382799-8382956
Length = 86
Score = 35.5 bits (78), Expect = 0.028
Identities = 14/36 (38%), Positives = 25/36 (69%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 124
M+I++KTL G+ I+ E ++T+A +K KI + G+
Sbjct: 1 MRIYVKTLKGRIISLEVARSDTIASVKDKIYAERGI 36
>03_03_0045 -
14029375-14029400,14029515-14029547,14030407-14030446,
14030527-14030736
Length = 102
Score = 35.1 bits (77), Expect = 0.037
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = -2
Query: 225 IFIKTLTGKTIT-AETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ---LEDSKTMAD 58
++I+ KT + +P ET +KQK+ P Q+LI L+DSKT+AD
Sbjct: 9 MYIRVKRNKTTYFIQCDPTETTLSIKQKLHSLVDQPPGNQQLILLATTEVVLDDSKTLAD 68
Query: 57 YNIQKESTL 31
++ ++ +
Sbjct: 69 QKVENDAVV 77
>07_01_1044 -
9104013-9104138,9104293-9104467,9105134-9105183,
9105271-9105297,9107490-9107535,9107679-9107734,
9108070-9108365,9108471-9109947
Length = 750
Score = 34.3 bits (75), Expect = 0.065
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 118 YGHTFFIGNFLLEIGHRLCGFRFGGNGFARQCFDE 222
+G F+ N L+++ HR G GG G ARQ FDE
Sbjct: 142 FGSDVFVQNALMDVYHRCGGGGGGGVGAARQVFDE 176
>06_02_0244 - 13445023-13445400,13445495-13446823
Length = 568
Score = 33.5 bits (73), Expect = 0.11
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPV-DQQRLIFAGKQLEDSKTMADYNI 49
I I+T +GK + + + V LK K+A + + + +L GK+LED + +AD +
Sbjct: 119 INIETTSGKKFQFQVDQSRNVKYLKSKLAVEGDEDLGEDHKLECDGKELEDHQLIADISK 178
Query: 48 QKESTLH 28
+ ++ +H
Sbjct: 179 KDDAVIH 185
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/57 (26%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -2
Query: 174 AETVADLKQKIADKEGVPVDQQRLIFAGKQL-EDSKTMADYNIQKESTLHHGVTISE 7
+E++A +K +I +G V++QRL+ G +L ++ + DY + + LH + +++
Sbjct: 59 SESIASVKLRIQRFKGFVVNKQRLVLDGHELARNNCHVKDYGLADGNVLHLVIRLAD 115
>05_07_0314 + 29162075-29163436,29163520-29163900,29164911-29165441
Length = 757
Score = 33.1 bits (72), Expect = 0.15
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMAD 58
I ++T+ G EP TV +KQ+IA D L+ G+ L+D+ + D
Sbjct: 119 ITVQTVHGNKFRFRVEPGRTVGYVKQQIAKNSTHDDDHHSLVLQGEVLDDAHLIHD 174
>01_04_0003 -
14989160-14989445,14989673-14989807,14991418-14991508,
14991571-14991712,14991924-14992403,14992610-14993548
Length = 690
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 156 LKQKIADKEGVPVDQQRLIFAGKQL-EDSKTMADYNIQKESTLHHGVTISEEG 1
+K+K KEG+P+ ++RL G + E T I+++ G++I E+G
Sbjct: 342 IKEKGLTKEGLPIKEKRLTKEGLPIKEKGLTKEGLPIKEKRLTKEGLSIKEKG 394
Score = 29.5 bits (63), Expect = 1.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -2
Query: 156 LKQKIADKEGVPVDQQRLIFAGKQL-EDSKTMADYNIQKESTLHHGVTISEEG 1
+K+K KEG+P+ ++RL G + E T I+++ G+ I E+G
Sbjct: 366 IKEKGLTKEGLPIKEKRLTKEGLSIKEKGLTKEGLPIKEKGLTKEGLPIKEKG 418
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -2
Query: 156 LKQKIADKEGVPVDQQRLIFAGKQL-EDSKTMADYNIQKESTLHHGVTISEEG 1
+K+K KEG+P+ ++R G + E T I+++ G+ I EEG
Sbjct: 414 IKEKGLTKEGIPIKEKRFTKEGLPIKEKGLTKEVLPIKEKGLTKKGLPIKEEG 466
>01_01_0931 -
7351306-7351371,7351620-7351772,7352343-7352484,
7352604-7352791,7353117-7353179,7353541-7353585,
7353658-7353792,7354515-7354623,7355032-7355084,
7355168-7355317,7355714-7355722,7356161-7356577
Length = 509
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -3
Query: 104 LSLRANNWKIPKLWPITIFKRN 39
++LR N K+ KLW +++FK+N
Sbjct: 313 IALRNRNLKLVKLWKVSMFKKN 334
>08_01_1029 -
10419090-10419476,10419721-10419822,10420367-10420459,
10420542-10420754,10421625-10421654
Length = 274
Score = 28.7 bits (61), Expect = 3.2
Identities = 27/88 (30%), Positives = 37/88 (42%)
Frame = -2
Query: 288 VEARAHSQQPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQ 109
VEA AH +F+ N V MQ K E ++L A+K G Q
Sbjct: 167 VEAVAHVLPKSTFLRN-VGMQSTEMKKNAKAAAMNDHVRELESELH---AEKMGSARMQL 222
Query: 108 RLIFAGKQLEDSKTMADYNIQKESTLHH 25
++ KQLED K +A N ++ L H
Sbjct: 223 QIADLHKQLEDQKEVARKNEEETEKLRH 250
>04_04_0281 + 24121267-24121537,24122567-24122799
Length = 167
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 168 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDS 73
T +LK ++ G+ +QRL+F GK+ EDS
Sbjct: 89 TFGELKTVVSIVTGLEPREQRLLFRGKEREDS 120
>02_04_0476 + 23248222-23248495,23249558-23249790
Length = 168
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -2
Query: 168 TVADLKQKIADKEGVPVDQQRLIFAGKQLEDS 73
T +LK +++ G+ +QRL+F GK+ ED+
Sbjct: 90 TFGELKVRLSMVTGLEPREQRLLFRGKEREDT 121
>05_01_0155 +
1043045-1043240,1043325-1043401,1043963-1044092,
1044376-1044473,1045622-1045729,1045748-1045800,
1046876-1047080
Length = 288
Score = 27.9 bits (59), Expect = 5.6
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = -2
Query: 219 IKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKE 40
IK + +TA E E + L+QK G ++ +L +AGK+L K + DY +
Sbjct: 109 IKNIEKTAVTALQESPEALC-LQQK---SSGDKLENVQLWWAGKELAMGKKLCDYIGVND 164
Query: 39 STLH 28
T H
Sbjct: 165 KTKH 168
>10_08_0265 - 16321752-16321946,16322048-16322385,16322536-16322770
Length = 255
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 368 RNQKLSGRRARSDRCFQTTSYPSYHSDMYFTVLKIAQ 478
R LS R+ARS CF +T P T+L I++
Sbjct: 7 RYTSLSHRKARSMECFPSTQCPVKRGKAIATLLNISE 43
>04_04_1182 +
31531426-31531702,31533741-31533997,31534672-31534818,
31535974-31536111
Length = 272
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -2
Query: 159 DLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLH 28
+LK+ +A + G+P QRL + GK+ ++ + ++ S L+
Sbjct: 94 ELKKLLAARTGLPAADQRLTYRGKERGNADYLDVCGVKNRSKLY 137
>06_01_0090 -
724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 27.1 bits (57), Expect = 9.9
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -2
Query: 156 LKQKIADKEGVPVDQQ 109
+KQK+A K+G P+D+Q
Sbjct: 113 IKQKLAKKDGAPIDRQ 128
>05_03_0300 + 11969222-11969767
Length = 181
Score = 27.1 bits (57), Expect = 9.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 279 LPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAIDAFKR 422
+PP + ++C+R P P + R PVI + A + +DAF +
Sbjct: 34 VPPAVADICSRTPFPDTCKSTAGRHASKYPVI-DVVAVLNMQVDAFSK 80
>03_06_0475 +
34193951-34194023,34195414-34195486,34195572-34195672,
34195912-34196009,34196326-34196388,34196534-34196626,
34196697-34196774
Length = 192
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 230 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 400
+ LLLI D+G + L +++ + + TT++ + IDF R +L G+R +
Sbjct: 15 LIKLLLIGDSGVGKSCL------LLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIK 65
>03_04_0139 +
17630316-17630451,17632328-17632354,17632970-17633140,
17633222-17633277
Length = 129
Score = 27.1 bits (57), Expect = 9.9
Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = -2
Query: 141 ADKEGVP--VDQQRLIFAGKQLEDSKTMAD 58
ADKE P V+ +LI AGK LE++KT+++
Sbjct: 55 ADKEKGPRTVNDLKLINAGKILENNKTLSE 84
>02_04_0347 +
22193708-22193720,22194317-22194390,22195388-22196132,
22196203-22196417,22196505-22196786,22196870-22196998,
22197088-22197267,22197538-22197645,22197888-22198094
Length = 650
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Frame = -3
Query: 188 PKRNPQRRWPISSKKLPIKKVCP-------*INKDLSLRANNW 81
P RNP+ +W IS ++ P +K P +++D++ N+W
Sbjct: 533 PHRNPESKWYISPEEWPEEKYPPWAHGPGYVVSQDIAKEINSW 575
>01_01_1150 +
9161058-9162722,9162837-9162920,9163095-9163199,
9163310-9163418,9163956-9164107,9164210-9164356
Length = 753
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 226 NIHQNIDGQNHYRRNGTRRDG-GRSQA 149
N H+ +DG + + R G RRD GRS++
Sbjct: 174 NAHERLDGGSFHGRAGYRRDSRGRSES 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,097,940
Number of Sequences: 37544
Number of extensions: 329784
Number of successful extensions: 1133
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -