Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15f05
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 111 2e-25
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 111 2e-25
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 111 2e-25
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 111 2e-25
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 111 2e-25
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 68 4e-12
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 57 1e-08
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 55 3e-08
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 55 3e-08
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 41 7e-04
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 40 9e-04
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 38 0.004
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 38 0.004
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 37 0.008
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 37 0.008
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 34 0.059
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 34 0.077
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 33 0.14
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 32 0.24
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 32 0.24
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 31 0.41
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 31 0.41
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 30 1.3
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 30 1.3
V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy ch... 30 1.3
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 30 1.3
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 30 1.3
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 30 1.3
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 30 1.3
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 29 2.2
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 28 3.9
Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical pr... 28 5.1
AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein. 28 5.1
AF000194-3|AAK39379.1| 191|Caenorhabditis elegans Hypothetical ... 28 5.1
Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical pr... 27 8.9
U58762-5|AAK39304.2| 496|Caenorhabditis elegans Hypothetical pr... 27 8.9
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 27 8.9
AJ431373-1|CAD24083.1| 496|Caenorhabditis elegans putative alph... 27 8.9
AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 27 8.9
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 27 8.9
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 109 bits (262), Expect = 1e-24
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 441 IQKESTLH 448
Score = 74.1 bits (174), Expect = 6e-14
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAG 91
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAG
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 517 IQKESTLH 524
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 593 IQKESTLH 600
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 669 IQKESTLH 676
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 745 IQKESTLH 752
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 821 IQKESTLH 828
Score = 109 bits (262), Expect = 1e-24
Identities = 49/68 (72%), Positives = 59/68 (86%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTL GKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 441 IQKESTLH 448
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 137 IQKESTLH 144
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 213 IQKESTLH 220
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 289 IQKESTLH 296
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 365 IQKESTLH 372
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 440
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 441 IQKESTLH 448
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 517 IQKESTLH 524
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 593 IQKESTLH 600
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 669 IQKESTLH 676
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 744
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 745 IQKESTLH 752
Score = 110 bits (265), Expect = 6e-25
Identities = 49/68 (72%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 820
Query: 51 IQKESTLH 28
IQK+STLH
Sbjct: 821 IQKQSTLH 828
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 111 bits (268), Expect = 2e-25
Identities = 50/68 (73%), Positives = 60/68 (88%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T++DYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 51 IQKESTLH 28
IQKESTLH
Sbjct: 61 IQKESTLH 68
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 79.8 bits (188), Expect = 1e-15
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYN 52
M I +KTLTGK I + EP + V +K+K+ +KEG+P QQRLIFAGKQ+ D KT ADY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 51 IQKESTLH 28
+ S LH
Sbjct: 61 VLGGSVLH 68
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 68.1 bits (159), Expect = 4e-12
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = -2
Query: 234 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 55
K+ + +KTL GKTI + +TV LK K+ +K GVP DQQRLIF QLE+ + + Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 54 NIQKESTLH 28
NI+ E +H
Sbjct: 220 NIRDEDIIH 228
Score = 37.5 bits (83), Expect = 0.006
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = -2
Query: 210 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 31
+TG IT E A + DL K+A+ + P ++ +D +T++DYNI+ STL
Sbjct: 98 VTGDPITVEASDA--IKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 30 HHGVTISEE 4
V + E+
Sbjct: 152 RLEVPVKEK 160
Score = 30.7 bits (66), Expect = 0.72
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = -2
Query: 279 RAHSQQPLSFIS-NSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGV 124
R S+ P IS +S M + +KT TGKTIT E ++K ++ DK+GV
Sbjct: 42 RISSKLPEDQISVDSKTMLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/37 (64%), Positives = 31/37 (83%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVP 121
MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 46
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 45 KESTLH 28
E+T++
Sbjct: 57 SEATIY 62
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQ 46
+F+KTL +T+ E E V +KQKI EG+P ++QRL +AG+QLEDS D I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLEDS----DCGID 56
Query: 45 KESTLH 28
E+T++
Sbjct: 57 SEATIY 62
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/68 (39%), Positives = 40/68 (58%)
Frame = -2
Query: 234 KMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 55
+ QIF+K L G + + +TV D+K I + +P L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 54 NIQKESTL 31
NIQK ST+
Sbjct: 212 NIQKSSTI 219
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = -2
Query: 225 IFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGK 88
+F+KTL +T+ E E V +KQKI EG+P ++QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 40.3 bits (90), Expect = 9e-04
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -2
Query: 201 KTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLED-SKTMADYNIQKESTLHH 25
K I E + ETV+ LK +I + V ++Q L+F G +L+D +KTM D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKITM 91
Query: 24 GVTIS 10
V +S
Sbjct: 92 NVKMS 96
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/70 (25%), Positives = 40/70 (57%)
Frame = -2
Query: 210 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 31
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 30 HHGVTISEEG 1
+ + + E G
Sbjct: 644 Y--LQVKERG 651
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/70 (25%), Positives = 40/70 (57%)
Frame = -2
Query: 210 LTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 31
+ G + + +++LKQ+I D+ G+PV +Q+L+ G ++D+ + A YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 30 HHGVTISEEG 1
+ + + E G
Sbjct: 644 Y--LQVKERG 651
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = -2
Query: 255 SFISNSVK-MQIFIKTLTGKTITAETEPAETVADLKQKIADKEG--VPVDQQRLIFAGKQ 85
SFI+N + + + +TLT E +T+A++K +A ++G + Q+LI+ GK
Sbjct: 43 SFINNQMMVLSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKI 102
Query: 84 LEDS 73
L+DS
Sbjct: 103 LDDS 106
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 37.1 bits (82), Expect = 0.008
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -2
Query: 174 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 31
++T+ +K I V + R++ K LED T+A YNIQ+ STL
Sbjct: 192 SDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTL 239
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 34.3 bits (75), Expect = 0.059
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = -2
Query: 213 TLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADY 55
++ G+ + E+V LK KI + G+P + L GK L D K +ADY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.077
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 174 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQK 43
++T+ +K +I V + R++ GK LED ++A YNIQ+
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQE 258
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = -2
Query: 174 AETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTL 31
++T+ +K +I G+ R K LED T+A YNI++ ST+
Sbjct: 181 SDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 230 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGR 391
+F LLLI D+G + L +++ A DT+T +Y + +DF R +L G+
Sbjct: 11 LFKLLLIGDSGVGKSCL------LLRFADDTYTESYISTIGVDFKIRTIELDGK 58
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 32.3 bits (70), Expect = 0.24
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +2
Query: 230 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGR 391
+F LLLI D+G + L +++ A DT+T +Y + +DF R +L G+
Sbjct: 11 LFKLLLIGDSGVGKSCL------LLRFADDTYTESYISTIGVDFKIRTIELDGK 58
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 31.5 bits (68), Expect = 0.41
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 230 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 400
+F LL+I D+G + +L +++ A +T + NY + +DF R ++G+R +
Sbjct: 10 LFKLLIIGDSGVGKSSL------LLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 31.5 bits (68), Expect = 0.41
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 230 IFTLLLINDNGCCECALASTDGGIVQQAADTHTTNYFPSTAIDFHARNQKLSGRRAR 400
+F LL+I D+G + +L +++ A +T + NY + +DF R ++G+R +
Sbjct: 10 LFKLLIIGDSGVGKSSL------LLRFADNTFSENYITTIGVDFKIRTMDINGQRVK 60
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 30.7 bits (66), Expect = 0.72
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -2
Query: 303 TIPPSVEARAHSQQPLSFISNS-VKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEG 127
T+PP EA ++ P++ S + V M + +T T+T++TEP +T + ++I +
Sbjct: 723 TVPPKTEA-PRTEVPMTGPSRTEVPMTVTPETGLSSTVTSKTEPPKTTTE--KRITPRTE 779
Query: 126 VP 121
VP
Sbjct: 780 VP 781
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -2
Query: 114 QQRLIFAGKQLEDSKTMADYNIQKESTLHHGVTISEE 4
QQ+L KQ+E+++ +A+ N+QK L H + +EE
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEE 1917
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -2
Query: 114 QQRLIFAGKQLEDSKTMADYNIQKESTLHHGVTISEE 4
QQ+L KQ+E+++ +A+ N+QK L H + +EE
Sbjct: 1881 QQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEE 1917
>V01494-1|CAA24738.1| 91|Caenorhabditis elegans myosin heavy chain
protein.
Length = 91
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -2
Query: 114 QQRLIFAGKQLEDSKTMADYNIQKESTLHHGVTISEE 4
QQ+L KQ+E+++ +A+ N+QK L H + +EE
Sbjct: 9 QQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEE 45
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 362 GNQLPLKGNNSWCGYRPPVAQFHHRWR 282
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 362 GNQLPLKGNNSWCGYRPPVAQFHHRWR 282
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -2
Query: 114 QQRLIFAGKQLEDSKTMADYNIQKESTLHHGVTISEE 4
QQ+L KQ+E+++ +A+ N+QK L H + +EE
Sbjct: 1884 QQKLKTQKKQVEEAEELANLNLQKYKQLTHQLEDAEE 1920
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 362 GNQLPLKGNNSWCGYRPPVAQFHHRWR 282
G Q P+ G+ S C Y P V HH W+
Sbjct: 91 GPQYPILGDQSLC-YNPSVTSTHHDWK 116
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 219 IKTLTGKTITAETEPAETVADLKQKIADKEGVPV 118
I TL G+TI P E +A K+ EG+P+
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMPM 312
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 29.1 bits (62), Expect = 2.2
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 55
M + IKT TGK IT E + +K ++ DK+GV G Q +E T+ D
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 54 NIQ--KESTLHHGVTISEE 4
IQ +++ L ++E+
Sbjct: 56 KIQEAQQAPLRESEEVTED 74
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 3.9
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -2
Query: 231 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ-LEDSKTMADY 55
M + IKT TGKTIT E + +K ++ K+GV AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 54 NIQK 43
IQ+
Sbjct: 56 KIQE 59
>Z81499-2|CAB04088.1| 598|Caenorhabditis elegans Hypothetical
protein F11C3.2 protein.
Length = 598
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 270 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAI 407
N P P V+ R PIP P +I ++ +++ PV+ + +V + +
Sbjct: 162 NCPFPDLYVQ---RVPIPGPPVIKIEEKMVPVPVVVVKEIEVTKFV 204
>AY494976-1|AAR87493.1| 598|Caenorhabditis elegans UNC-122 protein.
Length = 598
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 270 NVPLPPPMVELCNRRPIPTPRIISLQRQLISTPVIKNYQADVQEAI 407
N P P V+ R PIP P +I ++ +++ PV+ + +V + +
Sbjct: 162 NCPFPDLYVQ---RVPIPGPPVIKIEEKMVPVPVVVVKEIEVTKFV 204
>AF000194-3|AAK39379.1| 191|Caenorhabditis elegans Hypothetical
protein ZC328.5 protein.
Length = 191
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/78 (26%), Positives = 33/78 (42%)
Frame = -2
Query: 264 QPLSFISNSVKMQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQ 85
+P F+ N IF L G T+T +T + +A+ K+K+ +G + IF
Sbjct: 109 RPTDFVKNGGMPLIFKLYLNG-TVTCDTATIDELANTKEKMYYPDGGSYWLFKSIFDNYS 167
Query: 84 LEDSKTMADYNIQKESTL 31
L Y +K S L
Sbjct: 168 LSVKDPAMGYKRRKRSIL 185
>Z72510-1|CAA96651.1| 572|Caenorhabditis elegans Hypothetical
protein F53B7.2 protein.
Length = 572
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 10/75 (13%)
Frame = -2
Query: 300 IPPSVEARAHSQQPLSFISNSVKM----QIFIKT-----LTGKTITAETE-PAETVADLK 151
+P VEAR H ++ F+ N +M Q+F+ T +TI E E E +++
Sbjct: 484 LPDEVEARRHRKEKSHFVKNKKQMNKSAQLFLTTSEIDLRKARTIRKEQEDEEEEEEEIR 543
Query: 150 QKIADKEGVPVDQQR 106
+ +D+ DQ R
Sbjct: 544 EIQSDEPSAANDQNR 558
>U58762-5|AAK39304.2| 496|Caenorhabditis elegans Hypothetical
protein T27F7.3a protein.
Length = 496
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 376 KIIRPTCKKR*MLSNDFLSILSF*YVLYCFKNSANKKLHKS 498
KI CK + + N F++ LS +V YC + + L S
Sbjct: 104 KICLRLCKTKGIAENSFVTYLSSWFVFYCAPRTLSNSLETS 144
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 1 TLLANRNTMVKSRFLLNIVIGHSFGIFQLFARKDKSL-LIYGHTF 132
TL+ + +++ +F ++ V + +GIF+L KSL + G TF
Sbjct: 25 TLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTF 69
>AJ431373-1|CAD24083.1| 496|Caenorhabditis elegans putative alpha 2
mannosyltransferaseprotein.
Length = 496
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 376 KIIRPTCKKR*MLSNDFLSILSF*YVLYCFKNSANKKLHKS 498
KI CK + + N F++ LS +V YC + + L S
Sbjct: 104 KICLRLCKTKGIAENSFVTYLSSWFVFYCAPRTLSNSLETS 144
>AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical
protein Y71G12B.11b protein.
Length = 996
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 1 TLLANRNTMVKSRFLLNIVIGHSFGIFQLFARKDKSL-LIYGHTF 132
TL+ + +++ +F ++ V + +GIF+L KSL + G TF
Sbjct: 25 TLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTF 69
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 1 TLLANRNTMVKSRFLLNIVIGHSFGIFQLFARKDKSL-LIYGHTF 132
TL+ + +++ +F ++ V + +GIF+L KSL + G TF
Sbjct: 25 TLIYDAAKLIREKFAMHDVNANEYGIFRLDENPSKSLWMDNGRTF 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,906,816
Number of Sequences: 27780
Number of extensions: 284274
Number of successful extensions: 852
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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