Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15f03
(438 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 183 2e-45
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 172 2e-42
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 146 1e-34
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 130 1e-29
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 129 2e-29
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 125 4e-28
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 125 5e-28
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 124 1e-27
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 124 1e-27
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 121 8e-27
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 120 2e-26
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 114 9e-25
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 113 2e-24
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 111 6e-24
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 108 6e-23
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 96 3e-19
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 95 8e-19
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 87 2e-16
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 85 5e-16
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 80 2e-14
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 75 7e-13
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 72 6e-12
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 52 5e-06
UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiell... 41 0.013
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.22
UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.29
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 36 0.29
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 36 0.50
UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1; ... 35 0.87
UniRef50_UPI00015BC654 Cluster: UPI00015BC654 related cluster; n... 34 1.5
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 34 1.5
UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis s... 33 2.7
UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protei... 33 2.7
UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1; ... 33 2.7
UniRef50_Q9HM99 Cluster: UDP-N-acetylglucosamine 2-epimerase; n=... 33 2.7
UniRef50_A1ICP0 Cluster: Alpha-methylacyl-CoA racemase precursor... 33 3.5
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 33 3.5
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 33 3.5
UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila melanogaste... 33 3.5
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 33 3.5
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 33 3.5
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 33 3.5
UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n... 32 4.7
UniRef50_A7RAU7 Cluster: Putative uncharacterized protein c143R;... 32 4.7
UniRef50_Q08W76 Cluster: Hydrogen peroxide-inducible genes activ... 32 4.7
UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1; ... 32 4.7
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 32 4.7
UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing ... 32 6.2
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 32 6.2
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 32 6.2
UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family prote... 31 8.1
UniRef50_Q9QCQ3 Cluster: Thymidine kinase; n=2; Suid herpesvirus... 31 8.1
UniRef50_Q7RI20 Cluster: Homo sapiens KIAA1035 protein-related; ... 31 8.1
UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeb... 31 8.1
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 183 bits (445), Expect = 2e-45
Identities = 87/126 (69%), Positives = 102/126 (80%), Gaps = 2/126 (1%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
MGK MKPGKVVLVL+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKK 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEE 46
KI KRSKIK FVKV NYNHLMPTRY+VD +K KD+ +DPA ++K R +V+FEE
Sbjct: 61 KIAKRSKIKSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEE 120
Query: 45 RYKSGK 28
RYK+GK
Sbjct: 121 RYKTGK 126
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 172 bits (419), Expect = 2e-42
Identities = 80/126 (63%), Positives = 100/126 (79%), Gaps = 2/126 (1%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
MGKIMKPGKVVLVL G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKK 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 46
KI KR+K+KPF+KVV+Y HL+PTRY+VD +F+K + + LK P+K++K + +FEE
Sbjct: 61 KIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEE 120
Query: 45 RYKSGK 28
RYK+GK
Sbjct: 121 RYKTGK 126
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 146 bits (355), Expect = 1e-34
Identities = 66/128 (51%), Positives = 93/128 (72%), Gaps = 2/128 (1%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
M K +K GKV +V+ GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEE 46
K+ KR+KIKPF+KVVNYNHL+PTRYT+D K S + + P++R++ + + FEE
Sbjct: 61 KVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEE 120
Query: 45 RYKSGKXQ 22
R+++GK Q
Sbjct: 121 RHQAGKNQ 128
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 130 bits (314), Expect = 1e-29
Identities = 63/128 (49%), Positives = 86/128 (67%), Gaps = 4/128 (3%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
MGK +KP +V LVL+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPRKV MGK
Sbjct: 1 MGKFVKPDRVALVLNGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKK 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTVD-FSFEK---FSAKDLKDPAKRKKLRFNTRVRF 52
K +R+++K F K +NYNHLM TRY+V F +K F K+ + RK+ + +
Sbjct: 61 KFERRTRVKAFAKFINYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQTVM 120
Query: 51 EERYKSGK 28
ER+ + K
Sbjct: 121 RERFLAAK 128
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 129 bits (312), Expect = 2e-29
Identities = 59/124 (47%), Positives = 84/124 (67%), Gaps = 2/124 (1%)
Frame = -1
Query: 393 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 214
K MK G+V ++ GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK +
Sbjct: 53 KFMKVGRVAIITRGRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMV 112
Query: 213 HKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERY 40
KRS+IKPF+K+VNYNHLMPTRYT++ K S + K+ + R+ + + E+RY
Sbjct: 113 EKRSRIKPFIKIVNYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRY 172
Query: 39 KSGK 28
SGK
Sbjct: 173 TSGK 176
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 125 bits (302), Expect = 4e-28
Identities = 55/73 (75%), Positives = 65/73 (89%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
MGKIMK GKVVLVL GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K
Sbjct: 1 MGKIMKTGKVVLVLGGRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKT 60
Query: 219 KIHKRSKIKPFVK 181
++HKRSKIKPF+K
Sbjct: 61 RLHKRSKIKPFIK 73
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 125 bits (301), Expect = 5e-28
Identities = 53/121 (43%), Positives = 84/121 (69%)
Frame = -1
Query: 393 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKI 214
K +KPGKVV+V SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K I
Sbjct: 2 KFLKPGKVVIVTSGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTI 61
Query: 213 HKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 34
+RS++ F++VVN+ H +PTRY +D S E ++ D +K+ + + R F+ RY +
Sbjct: 62 QRRSRVGVFLRVVNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNA 121
Query: 33 G 31
G
Sbjct: 122 G 122
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 124 bits (298), Expect = 1e-27
Identities = 57/123 (46%), Positives = 83/123 (67%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
M K +KPGKVV+V +GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K
Sbjct: 1 MTKFLKPGKVVIVTAGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQ 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFEERY 40
I +RS++ F++VVN+ H +PTRY VD S E ++ D +KR + + R F+ RY
Sbjct: 61 TIARRSQVGVFLRVVNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARY 120
Query: 39 KSG 31
+G
Sbjct: 121 NAG 123
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 124 bits (298), Expect = 1e-27
Identities = 59/131 (45%), Positives = 89/131 (67%), Gaps = 8/131 (6%)
Frame = -1
Query: 402 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 223
+MGK +KPG+++++L+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG+
Sbjct: 899 EMGKFLKPGRLIVLLAGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQ 958
Query: 222 NKIHKRSKIKPFVKVVNYNHLMPTRYTVDFS--------FEKFSAKDLKDPAKRKKLRFN 67
+I KR+ +K F+K +N NH+MPTRY ++ S E+ +LK+ KRK+LR N
Sbjct: 959 KQIRKRTTLKVFIKQLNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRKN 1018
Query: 66 TRVRFEERYKS 34
R E+Y++
Sbjct: 1019 LRKYLAEKYRT 1029
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 121 bits (291), Expect = 8e-27
Identities = 60/131 (45%), Positives = 86/131 (65%), Gaps = 9/131 (6%)
Frame = -1
Query: 393 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPRKVHKRMGKN 220
K +KPG++V++L+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M +
Sbjct: 4 KFIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRK 63
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK-FS------AKDLKDPAKRKKLRFNTR 61
I KR+ I+ FVKVVNYNH+MPTRY + E F+ + AKR R +
Sbjct: 64 TILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAVK 123
Query: 60 VRFEERYKSGK 28
FE ++K+GK
Sbjct: 124 KIFEAKHKAGK 134
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 120 bits (288), Expect = 2e-26
Identities = 51/94 (54%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = -1
Query: 402 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGK 223
KM K+MK G+VV++L+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+ K
Sbjct: 17 KMAKLMKQGRVVVLLNGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSK 76
Query: 222 NKIHKRSKIKPFVKVVNYNHLMPTRYTV-DFSFE 124
K+ K+S IKPF+K +N NH+MPTRY V DF +
Sbjct: 77 EKLKKKSTIKPFLKSINMNHVMPTRYVVSDFDIK 110
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 114 bits (274), Expect = 9e-25
Identities = 46/86 (53%), Positives = 68/86 (79%)
Frame = -1
Query: 405 SKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMG 226
+ G+ +K G+VV++L GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRMG
Sbjct: 14 ASFGRGLKYGRVVILLQGRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMG 73
Query: 225 KNKIHKRSKIKPFVKVVNYNHLMPTR 148
KI KR+ +KPF+K VN NH+MPTR
Sbjct: 74 SKKIQKRTSVKPFIKYVNLNHIMPTR 99
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 113 bits (271), Expect = 2e-24
Identities = 55/118 (46%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Frame = -1
Query: 372 VVLVLSGRYAGRK-AIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKI 196
V LV Y+ R +V+K +D+G+ DK + + AGI+RYP+KV KRMG KI KRSK+
Sbjct: 63 VSLVALREYSRRNDVVVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKV 122
Query: 195 KPFVKVVNYNHLMPTRYTVDFSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGK 28
KPFVKV++YNHLMPTRY ++ K + K+P++R+ + + FEE+Y SGK
Sbjct: 123 KPFVKVISYNHLMPTRYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGK 180
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 111 bits (267), Expect = 6e-24
Identities = 54/125 (43%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
MGK++KPG+VV++LSGR AG KA+VV+ + + +PY + VAG+++ P KV K+M
Sbjct: 1 MGKLLKPGRVVILLSGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSK 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEK---FSAKDLKDPAKRKKLRFNTRVRFE 49
KI KR K+K FVK VN NHLMPTRY V + + S + +++ + RK+ R + + E
Sbjct: 61 KIEKRLKLKAFVKYVNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVLE 120
Query: 48 ERYKS 34
E + +
Sbjct: 121 ECFSN 125
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 108 bits (259), Expect = 6e-23
Identities = 45/81 (55%), Positives = 64/81 (79%)
Frame = -1
Query: 387 MKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHK 208
+KPGKVV++L+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI K
Sbjct: 97 LKPGKVVIMLNGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIK 156
Query: 207 RSKIKPFVKVVNYNHLMPTRY 145
RSK+K FVK +N NH++PTRY
Sbjct: 157 RSKVKAFVKYINVNHILPTRY 177
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 96.3 bits (229), Expect = 3e-19
Identities = 41/88 (46%), Positives = 61/88 (69%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 220
M KI+ PG+VV++LSGR+AG+KA+V +GT D+ YG V G++R P K+ ++M
Sbjct: 1 MSKILAPGRVVIILSGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAK 60
Query: 219 KIHKRSKIKPFVKVVNYNHLMPTRYTVD 136
R+ +K F KV+N NH+MPT+YTV+
Sbjct: 61 VQEMRTSVKSFCKVINVNHVMPTKYTVN 88
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 94.7 bits (225), Expect = 8e-19
Identities = 50/128 (39%), Positives = 80/128 (62%), Gaps = 7/128 (5%)
Frame = -1
Query: 390 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 211
+++ G+ V++L GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M +
Sbjct: 3 LLQAGRFVVMLQGRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLV 62
Query: 210 KRSKIKPFVKVVNYNHLMPTRYTV---DFSFEKFSAKD----LKDPAKRKKLRFNTRVRF 52
K++++K FVK VN+NH+M TR+ V DF F+K S + LKD +K L
Sbjct: 63 KKTQVKLFVKAVNFNHVMLTRHNVKDEDF-FKKISVEKVVAALKDAPAKKALLTEYAAVL 121
Query: 51 EERYKSGK 28
++Y + K
Sbjct: 122 RQKYLNNK 129
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 86.6 bits (205), Expect = 2e-16
Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 8/105 (7%)
Frame = -1
Query: 324 VKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRY 145
+K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRY 195
Query: 144 TVDFS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERYKS 34
++ S E+ +LK+ KRK LR N R E+Y++
Sbjct: 196 RLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLRKYLAEKYRT 240
Score = 32.7 bits (71), Expect = 3.5
Identities = 12/21 (57%), Positives = 19/21 (90%)
Frame = -1
Query: 402 KMGKIMKPGKVVLVLSGRYAG 340
+MGK +KPG++V++L+GR AG
Sbjct: 63 QMGKFLKPGRLVVLLAGRQAG 83
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 85.4 bits (202), Expect = 5e-16
Identities = 43/74 (58%), Positives = 51/74 (68%)
Frame = -1
Query: 342 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNH 163
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV V NYNH
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNH 63
Query: 162 LMPTRYTVDFSFEK 121
L RY+VD +K
Sbjct: 64 LKSIRYSVDIPLDK 77
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 79.8 bits (188), Expect = 2e-14
Identities = 45/105 (42%), Positives = 64/105 (60%), Gaps = 1/105 (0%)
Frame = -1
Query: 384 KPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKR 205
+PGKVV+VL+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H+
Sbjct: 24 QPGKVVVVLAGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRC 78
Query: 204 SKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAK-DLKDPAKRKKLR 73
++ PF ++ R +V F + + K D K AKR K +
Sbjct: 79 ARTAPF----GCTEILTAR-SVAFENAQVTKKMDEKKQAKRSKCK 118
Score = 67.7 bits (158), Expect = 1e-10
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = -1
Query: 246 KVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRK-KLRF 70
+V K+M + K KRSK K F+K +NY+HLMPTRYT+D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 69 NTRVRFEERYKSGK 28
+ EER+K+GK
Sbjct: 161 EAKKLLEERFKTGK 174
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 74.9 bits (176), Expect = 7e-13
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = -1
Query: 390 IMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIH 211
I+KPG V +VL GR+AG+KA++V+ +A VAGI PR++ M +
Sbjct: 5 IIKPGLVCIVLQGRHAGKKAVIVEALPHNERGS---YAIVAGIAALPRRITNSMSDEEAV 61
Query: 210 KRSKIKPFVKVVNYNHLMPTRYTVDFSFEKF-SAKDLKDPAKRKKLRFNTRVRFEER 43
R +++ FVK +N NHLMPT ++ +++ F S + + D KR+++ F+ R
Sbjct: 62 CRGRVRSFVKCMNVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRR 118
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 71.7 bits (168), Expect = 6e-12
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYD-EGTSDKPYGHAFVAGIDRYPRKVHKRMGK 223
M I K G+VV+VLSG+YAG+KA V+KN + E +K + GI + +K+ M K
Sbjct: 1 MVNIYKTGRVVIVLSGKYAGKKAFVLKNSNIESLCEKKI---IILGIKKEMKKIKYNMSK 57
Query: 222 NKIHKRSKIKPFVKVVNYNHLMPTRYTVD 136
KI + K F+K +N H+ PTRY ++
Sbjct: 58 RKIISNLRFKTFIKTINIKHVFPTRYVIE 86
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 52.0 bits (119), Expect = 5e-06
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Frame = -1
Query: 381 PGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRS 202
P +V+V SG+ AG+KA+V+K DE + A + R P++ K + +
Sbjct: 5 PNMIVVVTSGKNAGKKAVVIKQIDE-------RYVLTACVVRIPKEPEDHQPKWIKRRNA 57
Query: 201 KIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERYKSGK 28
K +K N HL+ TRY D ++D A+ KK+ N T+ + +K K
Sbjct: 58 KFYIILKKYNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENK 116
>UniRef50_Q3LW52 Cluster: Ribosomal protein L27; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 131
Score = 40.7 bits (91), Expect = 0.013
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Frame = -1
Query: 378 GKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRM--GKNKIH 211
GK++ L+G+YAG+ +VK+Y + + K + H V + ++ K K N
Sbjct: 8 GKLIFSLAGKYAGKYGFIVKSYSKYKNFKNFNHFLVCFLTNTKFTNKNSKSFISKMNDQP 67
Query: 210 KRSKIKPFVKVVNYNHLMPTRYTVDFSF 127
K K K +K++N NH++ ++ +++ ++
Sbjct: 68 KIFKYKIKLKILNANHIIVSKKSINVNW 95
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 36.7 bits (81), Expect = 0.22
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = -1
Query: 228 GKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRFE 49
G+ + +R + +P V + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 48 ERYKSGK 28
E KSG+
Sbjct: 79 EGSKSGR 85
>UniRef50_Q0VRK4 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 406
Score = 36.3 bits (80), Expect = 0.29
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Frame = -1
Query: 411 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDR-YPRKVHK 235
Y + +I + V +V++ RY G+ + E D+P GHAF AG+D R+V K
Sbjct: 212 YAYAIARIAEESPVPIVVARRYIGKIKNSAEEVVEIMPDQPLGHAFRAGVDAGIMRRVGK 271
Query: 234 RMGKNKIHKRS-----------KIKPFVKVVNYNH 163
G+ R+ K+ P + +VNY +
Sbjct: 272 FTGRMTYGARTTTVQESFADALKLAPDIPIVNYEY 306
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 36.3 bits (80), Expect = 0.29
Identities = 11/36 (30%), Positives = 28/36 (77%)
Frame = -1
Query: 411 YPSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 304
+P+K+ ++PG ++++L+GR+ G++ I++K+ +G
Sbjct: 50 HPTKLRPSLQPGTILILLAGRFRGKRVILLKHLGQG 85
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 35.5 bits (78), Expect = 0.50
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = -1
Query: 393 KIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 304
K + PG V+++L+GR+AG++ + +K D G
Sbjct: 89 KSITPGTVLIILAGRFAGKRVVALKQLDSG 118
>UniRef50_Q8PSL5 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina mazei|Rep: Putative uncharacterized
protein - Methanosarcina mazei (Methanosarcina frisia)
Length = 1110
Score = 34.7 bits (76), Expect = 0.87
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 135 FSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKXQVVL 13
FSFE+F A +PA R +RF R R E +S Q+ L
Sbjct: 459 FSFERFGATGTGEPALRGSVRFTLRFRMSEETESALSQINL 499
>UniRef50_UPI00015BC654 Cluster: UPI00015BC654 related cluster; n=1;
unknown|Rep: UPI00015BC654 UniRef100 entry - unknown
Length = 394
Score = 33.9 bits (74), Expect = 1.5
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +1
Query: 31 PTFVPLFKTYS----RVETQLLTLSRVFQVFCAEFFKTEVNCITCWHQVIVVYNLDERLY 198
P FV L+ + ++ +LLTL+R+ E K + + + +++ + Y
Sbjct: 126 PFFVSLYNSVEDNRLKLVFKLLTLNRL--ELTEEAIKKDRKILFYLGAIGLLFGIGVEFY 183
Query: 199 LGPLVDFILSHPLVHFPGVPV 261
G +V +++ PLVHFP +P+
Sbjct: 184 TGYIVGILVAFPLVHFPALPL 204
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 33.9 bits (74), Expect = 1.5
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = -1
Query: 408 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGT 301
P K+ + PG V+++L+GR+ G++ + +K+ ++ T
Sbjct: 27 PQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNT 62
>UniRef50_Q2HYH7 Cluster: Helicase; n=1; Bacillus thuringiensis
serovar tenebrionis|Rep: Helicase - Bacillus
thuringiensis subsp. tenebrionis
Length = 767
Score = 33.1 bits (72), Expect = 2.7
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 46 LFKTYSRVETQLLTLSRVFQV-FCAEFFKTEVNCITCWHQVIVVYNLDERLYLGPLVDFI 222
LF+ Y + + LT+ + F ++FF+ E N I C + +I ++ R L L+ +
Sbjct: 445 LFREYDLQDYKSLTIHKTCASNFNSKFFRNEYNIIDCAYLIIDEVSMIPREILSKLLQAV 504
Query: 223 LSHPLVHFPG 252
SH + F G
Sbjct: 505 PSHVKIIFAG 514
>UniRef50_Q1YQZ7 Cluster: Short chain dehydrogenase family protein;
n=1; gamma proteobacterium HTCC2207|Rep: Short chain
dehydrogenase family protein - gamma proteobacterium
HTCC2207
Length = 282
Score = 33.1 bits (72), Expect = 2.7
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 263 IPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPGFIILPILEG 409
IP+T A PY S+ + + YR ++ S PG I PIL G
Sbjct: 151 IPSTNAVPYSTSKFAVVGLSQALRIEAEYRGVRVSALCPGAIQTPILTG 199
>UniRef50_Q232L0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 189
Score = 33.1 bits (72), Expect = 2.7
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = -1
Query: 276 FVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKD 97
F+ I ++ +K KR ++ HKR + + N+N L T VD+ EK + +
Sbjct: 3 FLPEIQQFQQKQAKRKSQSSNHKRF----LIIIYNFNRLYLTEIEVDYKNEKITCSIFDE 58
Query: 96 PAKRKK 79
A RK+
Sbjct: 59 MASRKQ 64
>UniRef50_Q9HM99 Cluster: UDP-N-acetylglucosamine 2-epimerase; n=1;
Halobacterium salinarum|Rep: UDP-N-acetylglucosamine
2-epimerase - Halobacterium salinarium (Halobacterium
halobium)
Length = 457
Score = 33.1 bits (72), Expect = 2.7
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 193 LYLGPLVDFILSHPLVHFPGVPVDTSDEGMPVRLVGGTFVVILDYDSLATRVPAT*DQHY 372
++ G D +L H L + P +D G+ L T ++L +LA R+ A D
Sbjct: 53 IHTGQHYDDVLGHGLEEYGIEPHIAADLGIRGDLTQKTAEMMLAVKTLAERLEAWPDTTV 112
Query: 373 FTRLHYLTHLGGIFP 417
+H TH G+FP
Sbjct: 113 LPMVHGDTHAAGVFP 127
>UniRef50_A1ICP0 Cluster: Alpha-methylacyl-CoA racemase precursor;
n=1; Candidatus Desulfococcus oleovorans Hxd3|Rep:
Alpha-methylacyl-CoA racemase precursor - Candidatus
Desulfococcus oleovorans Hxd3
Length = 382
Score = 32.7 bits (71), Expect = 3.5
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = +1
Query: 7 FWKN---HLXLPTFVPLFKTYSRVETQLLTLSRVFQVFCAEFFKTEVNCI-TCWHQV-IV 171
FWKN HL L F+PL R + + TL +F+ + +KT++ + CW V V
Sbjct: 247 FWKNLCAHLGLDAFIPLQYDEPRRQEIIDTLRDIFRAKTLDQWKTDLAGVDCCWAPVQSV 306
Query: 172 VYNLDERLYLGPLVDFILSHP---LVHFPGVPVDTSDEGMPVRLVGGTF 309
LD+ + + P GVPV SD VR V +F
Sbjct: 307 AEVLDDPFFAHREMVVDSGDPDARKAKTIGVPVKLSDTPGSVRTVPDSF 355
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 32.7 bits (71), Expect = 3.5
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = -1
Query: 408 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 304
P+K+ +K G +V++L+G + G + +V+K D G
Sbjct: 65 PTKLRPSIKSGTIVILLAGVFRGSRVVVLKQLDSG 99
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 32.7 bits (71), Expect = 3.5
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -1
Query: 408 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 304
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 71 PTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSG 105
>UniRef50_A1Z9C2 Cluster: CG17050-PA; n=1; Drosophila
melanogaster|Rep: CG17050-PA - Drosophila melanogaster
(Fruit fly)
Length = 506
Score = 32.7 bits (71), Expect = 3.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 156 PTRYTVDFSFEKFSAKDLKDPAKRKKLRF 70
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 32.7 bits (71), Expect = 3.5
Identities = 13/35 (37%), Positives = 25/35 (71%)
Frame = -1
Query: 408 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 304
P+ + KI+ PG+V+++LSGR+ G++ + +K G
Sbjct: 52 PATLRKIV-PGQVLILLSGRFQGKRVVFLKQLKSG 85
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 32.7 bits (71), Expect = 3.5
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = -1
Query: 408 PSKMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 304
P+K+ + PG V+++L+GR+ G++ + +K G
Sbjct: 82 PAKLRASITPGTVLIILAGRFKGKRVVFLKQLASG 116
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 32.7 bits (71), Expect = 3.5
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -1
Query: 399 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDE 307
M K++ G+VV+ + GR AGRKA+VV DE
Sbjct: 1 MVKVIDIGRVVVKVLGREAGRKAVVVDIVDE 31
>UniRef50_UPI0000ECCEB7 Cluster: UPI0000ECCEB7 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECCEB7 UniRef100 entry -
Gallus gallus
Length = 75
Score = 32.3 bits (70), Expect = 4.7
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = -1
Query: 231 MGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKLRFNTRVRF 52
+GK K K+ K K + + HL+ ++ T + +K + LK K+K +F+ + +
Sbjct: 1 VGKKKKEKKKKKKENYRNILEAHLLKSKQTNKQTNKKHPSFTLKKKKKKKAFKFSGKFKS 60
Query: 51 EER 43
EER
Sbjct: 61 EER 63
>UniRef50_A7RAU7 Cluster: Putative uncharacterized protein c143R;
n=1; Chlorella virus AR158|Rep: Putative uncharacterized
protein c143R - Chlorella virus AR158
Length = 80
Score = 32.3 bits (70), Expect = 4.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 37 FVPLFKTYSRVETQLLTLSRVFQVFCAEFFKTEVNCI 147
F+P+ K + + +L L R F +F E F VNC+
Sbjct: 41 FLPVSKMSDMLSSMILLLRRNFLIFSVEIFSRSVNCV 77
>UniRef50_Q08W76 Cluster: Hydrogen peroxide-inducible genes
activator OxyR; n=1; Stigmatella aurantiaca DW4/3-1|Rep:
Hydrogen peroxide-inducible genes activator OxyR -
Stigmatella aurantiaca DW4/3-1
Length = 228
Score = 32.3 bits (70), Expect = 4.7
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 338 ARLS*SRITTKVPPTSRTGMPSSLVSTGTPGKCTRGWERIKSTRGP 201
+R S + TT+ +SRTG + S +C R WER++ T GP
Sbjct: 185 SRSSCATWTTRTSSSSRTG----IASAAKRWRCARAWERMRWTSGP 226
>UniRef50_Q02BB6 Cluster: Putative uncharacterized protein; n=1;
Solibacter usitatus Ellin6076|Rep: Putative
uncharacterized protein - Solibacter usitatus (strain
Ellin6076)
Length = 192
Score = 32.3 bits (70), Expect = 4.7
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -3
Query: 337 QGYRSQELRRRYLRQAVRACLRRWYRQVPPESAQEDGKE*NPQEVQDKAFRQGCK 173
Q Y ++ R+RY Q RA R+W R+ E +E + Q + +R+ K
Sbjct: 49 QRYPPRQARQRYCSQGCRAAARKWSRRKAQERYRETAAGQQKRNGQSRRYRERVK 103
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 32.3 bits (70), Expect = 4.7
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = -1
Query: 417 REYPS--KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEG 304
R+Y S K+ + +KPG V+++L+G Y G++ +++K G
Sbjct: 32 RKYASVPKVRESLKPGAVLILLTGSYKGKRVVLLKVLKSG 71
>UniRef50_UPI00006CB01E Cluster: Kinesin motor domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
motor domain containing protein - Tetrahymena thermophila
SB210
Length = 974
Score = 31.9 bits (69), Expect = 6.2
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -1
Query: 225 KNKIHKRSKIKPFV--KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 76
K + +K + F+ K++ YN P YT +F +EK ++ KRK++
Sbjct: 867 KCQFYKNKEEPQFICNKILEYNEYSPHYYTCEFGYEKCDIQECSKLIKRKEI 918
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 31.9 bits (69), Expect = 6.2
Identities = 12/32 (37%), Positives = 23/32 (71%)
Frame = -1
Query: 414 EYPSKMGKIMKPGKVVLVLSGRYAGRKAIVVK 319
EY + + K PG + ++L+GR+ GR+A+++K
Sbjct: 25 EYTT-LRKSCAPGAIAIILAGRFRGRRAVILK 55
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 31.9 bits (69), Expect = 6.2
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = -1
Query: 381 PGKVVLVLSGRYAGRKAIVVKNYDEG 304
PG V+++L+GR+ G++ +++K D+G
Sbjct: 41 PGTVLILLAGRFRGKRVVLLKALDQG 66
>UniRef50_UPI00006D0DE1 Cluster: Leucine Rich Repeat family protein;
n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
Repeat family protein - Tetrahymena thermophila SB210
Length = 4758
Score = 31.5 bits (68), Expect = 8.1
Identities = 22/74 (29%), Positives = 32/74 (43%)
Frame = +1
Query: 82 LTLSRVFQVFCAEFFKTEVNCITCWHQVIVVYNLDERLYLGPLVDFILSHPLVHFPGVPV 261
L F VF F + +C + VIV NLD+ LYL ++ + L +
Sbjct: 107 LLFDSCFYVFDTNFQQIFNDCSQLFDDVIVQANLDKSLYLLSVIASFQNIQLSQVVDISF 166
Query: 262 DTSDEGMPVRLVGG 303
TSD + +VGG
Sbjct: 167 VTSDPNDNIYVVGG 180
>UniRef50_Q9QCQ3 Cluster: Thymidine kinase; n=2; Suid herpesvirus
1|Rep: Thymidine kinase - Suid herpesvirus 1
(Pseudorabies virus)
Length = 297
Score = 31.5 bits (68), Expect = 8.1
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 314 TTKVPPTSRTGMPSSLVSTGTPGKCTRG-WER 222
+++ P ++RT PSS G +CTRG W R
Sbjct: 232 SSRTPSSARTRRPSSATGAGARSRCTRGRWTR 263
>UniRef50_Q7RI20 Cluster: Homo sapiens KIAA1035 protein-related;
n=3; Plasmodium (Vinckeia)|Rep: Homo sapiens KIAA1035
protein-related - Plasmodium yoelii yoelii
Length = 1563
Score = 31.5 bits (68), Expect = 8.1
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = -1
Query: 255 YPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMPTRYTVDFSFEKFSAKDLKDPAKRKKL 76
Y +++ K K + + + K NYNH+ +Y+VDFS +KF ++K K +
Sbjct: 401 YTKELKKEKEKRQTYMNEFLNDINKETNYNHV---KYSVDFS-DKFLVSNIKRLKKPVSV 456
Query: 75 RFNTRVRFEER--YKSGKXQVVLPE 7
F + YK G +V E
Sbjct: 457 IFRIENMSKPHFLYKEGYSPLVFSE 481
>UniRef50_O15595 Cluster: 60S ribosomal protein L6; n=5; Entamoeba
histolytica|Rep: 60S ribosomal protein L6 - Entamoeba
histolytica
Length = 92
Score = 31.5 bits (68), Expect = 8.1
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -1
Query: 402 KMGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKP 289
K+ K + PG +++++ G+YAG+K VV +G S P
Sbjct: 53 KLRKSIVPGAILIIVGGKYAGKK--VVSLPSQGVSSAP 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 447,687,292
Number of Sequences: 1657284
Number of extensions: 8823848
Number of successful extensions: 29285
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 28348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29258
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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