Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15e20
         (257 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p pro...   124   1e-29
AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA ...   124   1e-29
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    27   4.8  
AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-P...    27   4.8  
BT023794-1|AAZ41803.1|  409|Drosophila melanogaster GH05001p pro...    26   8.4  
AE014298-2746|AAF48865.1|  832|Drosophila melanogaster CG6606-PA...    26   8.4  

>AY075491-1|AAL68301.1|   70|Drosophila melanogaster RE42506p
           protein.
          Length = 70

 Score =  124 bits (300), Expect = 1e-29
 Identities = 56/69 (81%), Positives = 64/69 (92%)
 Frame = -1

Query: 209 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 30
           MPREIK++KDFL KARR DA++VKIKKNP N KFK+RCSRFLYTLV+ DKEKA+K+KQSL
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSL 60

Query: 29  PPGLQVKEV 3
           PPGLQVKEV
Sbjct: 61  PPGLQVKEV 69


>AE013599-14|EAA46007.1|   70|Drosophila melanogaster CG18001-PA
           protein.
          Length = 70

 Score =  124 bits (300), Expect = 1e-29
 Identities = 56/69 (81%), Positives = 64/69 (92%)
 Frame = -1

Query: 209 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 30
           MPREIK++KDFL KARR DA++VKIKKNP N KFK+RCSRFLYTLV+ DKEKA+K+KQSL
Sbjct: 1   MPREIKEVKDFLNKARRSDARAVKIKKNPTNTKFKIRCSRFLYTLVVQDKEKADKIKQSL 60

Query: 29  PPGLQVKEV 3
           PPGLQVKEV
Sbjct: 61  PPGLQVKEV 69


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 17/55 (30%), Positives = 29/55 (52%)
 Frame = -1

Query: 170 KARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSLPPGLQVKE 6
           K R++  + ++ K+  E +K K R  +      I +KE+ EKLK+     L+ KE
Sbjct: 595 KLRKEREEKMREKEREEKIKEKERVEK------IKEKEREEKLKKEKEEKLKEKE 643



 Score = 25.8 bits (54), Expect = 8.4
 Identities = 20/58 (34%), Positives = 33/58 (56%)
 Frame = -1

Query: 203 REIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 30
           RE K +K+  +K + ++ + +K K+  E  K K R  + L    I +KE+ EKLK+ L
Sbjct: 528 REEK-LKEEKLKEKEREER-MKEKEREEKAKEKQREEK-LREEKIKEKEREEKLKEKL 582


>AE014134-1194|AAF52458.2| 1833|Drosophila melanogaster CG18304-PA
            protein.
          Length = 1833

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -1

Query: 194  KDIKDFLIKARRKDAKSVK-IKKNPENVKFKVRCSRFLY 81
            K+IKD   KA + D+K V+ +KK  E V+  +   +  Y
Sbjct: 1074 KEIKDLKTKASKSDSKQVQDLKKQVEEVQASLSAEQKRY 1112


>BT023794-1|AAZ41803.1|  409|Drosophila melanogaster GH05001p
           protein.
          Length = 409

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -1

Query: 155 DAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 30
           ++K  K KKN E  + +VR +  + +  +TD  K +K K S+
Sbjct: 110 ESKPGKEKKNKERGELEVRIAFVVKSGSLTDLSKKDKHKSSI 151


>AE014298-2746|AAF48865.1|  832|Drosophila melanogaster CG6606-PA
           protein.
          Length = 832

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -1

Query: 155 DAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQSL 30
           ++K  K KKN E  + +VR +  + +  +TD  K +K K S+
Sbjct: 110 ESKPGKEKKNKERGELEVRIAFVVKSGSLTDLSKKDKHKSSI 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,680,521
Number of Sequences: 53049
Number of extensions: 174127
Number of successful extensions: 516
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 24,988,368
effective HSP length: 64
effective length of database: 21,593,232
effective search space used: 453457872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)