Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15e18
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ285411-1|ABB96223.1|  758|Drosophila melanogaster SIFamide rec...    28   8.9  
BT009988-1|AAQ22457.1|  758|Drosophila melanogaster RE47636p pro...    28   8.9  
AE014297-2972|AAN13859.2|  758|Drosophila melanogaster CG10823-P...    28   8.9  

>DQ285411-1|ABB96223.1|  758|Drosophila melanogaster SIFamide
           receptor protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 90  SLVEYNMRCSHEHHYQN*TKLKWDHTGSVGFLIKEESSKS 209
           SL  +NM    + +      LK D  GS  FLIK+ESS S
Sbjct: 563 SLRRHNMMLKQDSNLSQQMLLKQDSHGSRQFLIKQESSCS 602


>BT009988-1|AAQ22457.1|  758|Drosophila melanogaster RE47636p
           protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 90  SLVEYNMRCSHEHHYQN*TKLKWDHTGSVGFLIKEESSKS 209
           SL  +NM    + +      LK D  GS  FLIK+ESS S
Sbjct: 563 SLRRHNMMLKQDSNLSQQMLLKQDSHGSRQFLIKQESSCS 602


>AE014297-2972|AAN13859.2|  758|Drosophila melanogaster CG10823-PA,
           isoform A protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 90  SLVEYNMRCSHEHHYQN*TKLKWDHTGSVGFLIKEESSKS 209
           SL  +NM    + +      LK D  GS  FLIK+ESS S
Sbjct: 563 SLRRHNMMLKQDSNLSQQMLLKQDSHGSRQFLIKQESSCS 602


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,033,203
Number of Sequences: 53049
Number of extensions: 402890
Number of successful extensions: 749
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 749
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)