Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15e17
(628 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in IAP... 190 3e-47
UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in IAP2... 91 2e-17
UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5; ... 68 2e-10
UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineat... 50 3e-05
UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16; Nucleopolyhedro... 48 1e-04
UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -... 37 0.45
UniRef50_Q5AFT3 Cluster: Protein CFT1; n=4; Candida albicans|Rep... 34 2.4
UniRef50_Q7T9S2 Cluster: ORF_93; n=7; Granulovirus|Rep: ORF_93 -... 33 4.2
UniRef50_Q5UQ73 Cluster: Uncharacterized protein L509; n=1; Acan... 33 4.2
UniRef50_Q4A5W9 Cluster: Putative uncharacterized protein; n=2; ... 33 7.4
UniRef50_Q7QU32 Cluster: GLP_725_33478_28370; n=1; Giardia lambl... 32 9.8
>UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in
IAP2-VLF1 intergenic region; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 133
Score = 190 bits (462), Expect = 3e-47
Identities = 97/134 (72%), Positives = 101/134 (75%)
Frame = -2
Query: 402 MSNLMKNFFTEXXXXXXXXXXXXXXXXXXSDWLCEQVYPDKDFSLKLKRVINMFLNDEIE 223
MSNLMKNFFTE S+WLCEQVYPDKDFSLKLKRV+NMFLN+EIE
Sbjct: 1 MSNLMKNFFTELVKSTTFTTKVSVVKTTLSNWLCEQVYPDKDFSLKLKRVVNMFLNNEIE 60
Query: 222 NDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDRAQXXXXXX 43
N+KIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQD
Sbjct: 61 NNKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRFVDDNVLTQDELS-FLANF 119
Query: 42 XXXXWSEAYQLPAY 1
EAYQLPAY
Sbjct: 120 LVTKMDEAYQLPAY 133
>UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in
IAP2-VLF1 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 9.4 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 84
Score = 91.1 bits (216), Expect = 2e-17
Identities = 45/46 (97%), Positives = 45/46 (97%)
Frame = -2
Query: 561 SPAIISKNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 424
SPAIISKNTES VEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID
Sbjct: 39 SPAIISKNTESTVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 84
>UniRef50_O10328 Cluster: Uncharacterized 14.9 kDa protein; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 14.9 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 130
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/81 (38%), Positives = 49/81 (60%)
Frame = -2
Query: 312 DWLCEQVYPDKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALL 133
DWL QVYPD+ FS K + V+ MF++ +++ + +Y LV T+D S L+ Q+++L A
Sbjct: 31 DWLNSQVYPDERFSAKWRGVLKMFVDGQLDEESVYCLVNTIDPSKLLTVGQINYLARAFR 90
Query: 132 NNVSVTFTLHRFVDDNVLTQD 70
NN + +FVD L+ D
Sbjct: 91 NNRKMMSITQKFVDGYRLSDD 111
>UniRef50_Q0N433 Cluster: Ac75-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac75-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 130
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = -2
Query: 285 DKDFSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTL 106
DK F K +V+ MF+ +I + + ++ VDS NKL+ Q+DFL + +N V L
Sbjct: 38 DKRFCDKFVKVLKMFIASQITIEDMCNIMAAVDSPNKLTADQIDFLCQQVQHNHEVMRIL 97
Query: 105 HRFVDD 88
H FVD+
Sbjct: 98 HTFVDE 103
>UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16;
Nucleopolyhedrovirus|Rep: LdOrf-85 peptide - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 86
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = -2
Query: 543 KNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 424
K S+ D+ + KAKS++KK ++E+A DAILNKNTSS D
Sbjct: 47 KPESSDAADLQTGKAKSIKKKRDLERAFDAILNKNTSSTD 86
>UniRef50_Q80LN7 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 129
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/69 (31%), Positives = 42/69 (60%)
Frame = -2
Query: 276 FSLKLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSVTFTLHRF 97
F++KL +++N+FL ++IE + + L+ + D N L+ QV++L + +NN +V L F
Sbjct: 41 FTVKLVKIVNLFLQEKIEVEDLQHLLNSTDGLN-LTINQVNYLYYQAVNNNNVIHILQLF 99
Query: 96 VDDNVLTQD 70
+ LT +
Sbjct: 100 TKGHCLTDE 108
>UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 85
Score = 36.7 bits (81), Expect = 0.45
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -2
Query: 540 NTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 424
NT+S D+ + + K +KK DAILNKN SS++
Sbjct: 47 NTDSAPHDLYNEETKKAKKKKHFNDMFDAILNKNNSSLE 85
>UniRef50_Q5AFT3 Cluster: Protein CFT1; n=4; Candida albicans|Rep:
Protein CFT1 - Candida albicans (Yeast)
Length = 1420
Score = 34.3 bits (75), Expect = 2.4
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -2
Query: 237 NDEIENDKIYKLVETVDSSNKLSRRQVDFLIH-ALLNN-VSVTFTL 106
ND+ + D +YK E ++ +S+ ++FL H L+NN S TFTL
Sbjct: 467 NDDDDEDDLYKEEEEEETQKTISKSHIEFLYHDELINNGPSSTFTL 512
>UniRef50_Q7T9S2 Cluster: ORF_93; n=7; Granulovirus|Rep: ORF_93 -
Adoxophyes orana granulovirus (AoGV)
Length = 154
Score = 33.5 bits (73), Expect = 4.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 267 KLKRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVSV 118
KL ++ MFLNDE++ +Y+L KL+ Q D+L N+ +
Sbjct: 51 KLNKIFKMFLNDELDQSMMYQL---FGDKLKLNHSQFDYLYQRTKNDAQI 97
>UniRef50_Q5UQ73 Cluster: Uncharacterized protein L509; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L509 - Mimivirus
Length = 280
Score = 33.5 bits (73), Expect = 4.2
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = -2
Query: 261 KRVINMFLNDEIENDKIYKLVETVDSSNKLSRRQVDFLIHALLNNVS--VTFTLHR-FVD 91
K + + L +I+N+K+ K+ T+D +NK + +D++++ L N++ + T H
Sbjct: 138 KSINDYHLIKKIDNNKLTKI--TIDDTNKWNTESIDYILNQLKNSIKPLIILTHHAPLFS 195
Query: 90 DNVL 79
DN+L
Sbjct: 196 DNIL 199
>UniRef50_Q4A5W9 Cluster: Putative uncharacterized protein; n=2;
Mycoplasma synoviae 53|Rep: Putative uncharacterized
protein - Mycoplasma synoviae (strain 53)
Length = 971
Score = 32.7 bits (71), Expect = 7.4
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = -2
Query: 300 EQVYPDKDFSLKLKRVINMFLNDEIENDKIYKL-VETVDSSNKLSRRQVDFLIHALLNNV 124
+++Y DKD +K+K + LN+ I + IYKL +E + K + D +
Sbjct: 241 KEIY-DKDLYIKIKIKDYVLLNENINEENIYKLNIENYNIEQKKEAEKED-----INQFK 294
Query: 123 SVTFTLHRFVDDNVL 79
S TF L+ F+++ +L
Sbjct: 295 SKTFNLYNFINEYLL 309
>UniRef50_Q7QU32 Cluster: GLP_725_33478_28370; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_725_33478_28370 - Giardia lamblia
ATCC 50803
Length = 1702
Score = 32.3 bits (70), Expect = 9.8
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -2
Query: 141 ALLNNVSVTFTLHRFVDDNVLTQD 70
ALLN +S+TF + + +DDN L QD
Sbjct: 1120 ALLNTISLTFCIKKTLDDNALLQD 1143
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,872,296
Number of Sequences: 1657284
Number of extensions: 8025653
Number of successful extensions: 20864
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20860
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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