Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15e09
         (808 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_1059 - 10775143-10776063                                         36   0.038
01_06_1056 + 34139467-34140013,34141437-34142338                       28   7.6  

>08_01_1059 - 10775143-10776063
          Length = 306

 Score = 35.9 bits (79), Expect = 0.038
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = +2

Query: 92  HTNATHKKEAKAQRGIVFIVLALALGRGLPGFGNTAVP 205
           H NA  ++ + A+RG      A A GRGL GFG+  VP
Sbjct: 125 HQNAHKRERSLAKRGAAVAAAAAAAGRGLYGFGDPFVP 162


>01_06_1056 + 34139467-34140013,34141437-34142338
          Length = 482

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = -3

Query: 749 VLYFPF*G*GGHDGALLPILRLRWARRCFTSRFIF*AVWLDADSAGFCVPTV*LCCVGNV 570
           V+  PF G  GH  A++ + RL  AR   T  F+    WL   S+    P V L  + NV
Sbjct: 19  VVAVPFPG-RGHVNAMMNLSRLLAARGAATVTFVVTEEWLGLLSSSSAPPGVRLRAIPNV 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,439,123
Number of Sequences: 37544
Number of extensions: 489053
Number of successful extensions: 1341
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)