Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15e06
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062192-1|AAL58553.1|  151|Anopheles gambiae cytochrome P450 CY...    23   4.9  
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    23   8.6  
AY062191-1|AAL58552.1|  151|Anopheles gambiae cytochrome P450 CY...    23   8.6  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    23   8.6  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    23   8.6  

>AY062192-1|AAL58553.1|  151|Anopheles gambiae cytochrome P450
           CYP4H17 protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -2

Query: 207 ESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNVLD 91
           ESL+++       R LLE M+ N T I      ++N+ +
Sbjct: 68  ESLRLVPPVPFIGRKLLEDMEMNGTTIPAGATISLNIFN 106


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -1

Query: 379 GHWQQHVANTKKPPQQTAGKPFGAN 305
           GH +  VA +  P +  AG+PFG N
Sbjct: 141 GH-EATVAYSFLPTESFAGRPFGLN 164


>AY062191-1|AAL58552.1|  151|Anopheles gambiae cytochrome P450
           CYP4H16 protein.
          Length = 151

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -2

Query: 207 ESLKILSTQSVGARNLLEPMQANETKIKLNRIETVNV 97
           ESL+++       R LLE M+ N T +      ++N+
Sbjct: 68  ESLRLVPPVPFVGRKLLEDMEMNGTVVPAGTTISLNI 104


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -2

Query: 150 MQANETKIKLNRIETVNVLDFLGSVYDNTIQXDSYQSKC 34
           MQ    ++ +  +    V D++ +VY++T    + QS+C
Sbjct: 1   MQLVRVQLLIGSLLLATVGDWVEAVYESTSTASTAQSEC 39


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -2

Query: 150 MQANETKIKLNRIETVNVLDFLGSVYDNTIQXDSYQSKC 34
           MQ    ++ +  +    V D++ +VY++T    + QS+C
Sbjct: 1   MQLVRVQLLIGSLLLATVGDWVEAVYESTSTASTAQSEC 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 530,544
Number of Sequences: 2352
Number of extensions: 9650
Number of successful extensions: 65
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)