Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15e03
(437 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113606-1|AAM29611.1| 121|Drosophila melanogaster RH59219p pro... 29 3.7
AE014298-39|AAG22360.1| 121|Drosophila melanogaster CG3176-PA p... 29 3.7
AE014298-36|AAN09015.1| 121|Drosophila melanogaster CG32817-PA ... 29 3.7
M86655-1|AAA28595.1| 1165|Drosophila melanogaster GTPase-activat... 27 8.4
BT022134-1|AAY51529.1| 543|Drosophila melanogaster IP08802p pro... 27 8.4
BT011114-1|AAR82781.1| 535|Drosophila melanogaster LD17675p pro... 27 8.4
AY051747-1|AAK93171.1| 1163|Drosophila melanogaster LD27520p pro... 27 8.4
AE014296-1762|AAN11935.1| 1163|Drosophila melanogaster CG6721-PB... 27 8.4
AE014296-1761|AAF50196.1| 1163|Drosophila melanogaster CG6721-PA... 27 8.4
AE014134-2970|AAF53700.1| 530|Drosophila melanogaster CG10348-P... 27 8.4
>AY113606-1|AAM29611.1| 121|Drosophila melanogaster RH59219p
protein.
Length = 121
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 140 GSVNLIAHGLELNDPPKKPPICDVPKVI 223
GS+ L H ++L++PP K C +P +I
Sbjct: 40 GSIILRNHSIDLSNPPLKSRCCQLPTLI 67
>AE014298-39|AAG22360.1| 121|Drosophila melanogaster CG3176-PA
protein.
Length = 121
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 140 GSVNLIAHGLELNDPPKKPPICDVPKVI 223
GS+ L H ++L++PP K C +P +I
Sbjct: 40 GSIILRNHSIDLSNPPLKSRCCQLPTLI 67
>AE014298-36|AAN09015.1| 121|Drosophila melanogaster CG32817-PA
protein.
Length = 121
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 140 GSVNLIAHGLELNDPPKKPPICDVPKVI 223
GS+ L H ++L++PP K C +P +I
Sbjct: 40 GSIILRNHSIDLSNPPLKSRCCQLPTLI 67
>M86655-1|AAA28595.1| 1165|Drosophila melanogaster GTPase-activating
protein protein.
Length = 1165
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 152 LIAHGLELNDPPKKPPICDVPKVILLETSTFNLLIVLEFTVKKCHRVRYN 301
L H L K PICD+P L E ++ L F ++ C ++ +N
Sbjct: 790 LTTHSLSYAKSKGKQPICDIP---LQEIASVEQLKDKSFKMQNCFKIVHN 836
>BT022134-1|AAY51529.1| 543|Drosophila melanogaster IP08802p
protein.
Length = 543
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +2
Query: 176 NDPPKKPPICDVPKV--ILLETSTFNL 250
N PP PP C +P V LLE T NL
Sbjct: 186 NAPPLTPPQCSIPAVHPTLLEAMTKNL 212
>BT011114-1|AAR82781.1| 535|Drosophila melanogaster LD17675p
protein.
Length = 535
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 152 LIAHGLELNDPPKKPPICDVPKVILLETSTFNLLIVLEFTVKKCHRVRYN 301
L H L K PICD+P L E ++ L F ++ C ++ +N
Sbjct: 160 LTTHSLSYAKSKGKQPICDIP---LQEIASVEQLKDKSFKMQNCFKIVHN 206
>AY051747-1|AAK93171.1| 1163|Drosophila melanogaster LD27520p
protein.
Length = 1163
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 152 LIAHGLELNDPPKKPPICDVPKVILLETSTFNLLIVLEFTVKKCHRVRYN 301
L H L K PICD+P L E ++ L F ++ C ++ +N
Sbjct: 788 LTTHSLSYAKSKGKQPICDIP---LQEIASVEQLKDKSFKMQNCFKIVHN 834
>AE014296-1762|AAN11935.1| 1163|Drosophila melanogaster CG6721-PB,
isoform B protein.
Length = 1163
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 152 LIAHGLELNDPPKKPPICDVPKVILLETSTFNLLIVLEFTVKKCHRVRYN 301
L H L K PICD+P L E ++ L F ++ C ++ +N
Sbjct: 788 LTTHSLSYAKSKGKQPICDIP---LQEIASVEQLKDKSFKMQNCFKIVHN 834
>AE014296-1761|AAF50196.1| 1163|Drosophila melanogaster CG6721-PA,
isoform A protein.
Length = 1163
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 152 LIAHGLELNDPPKKPPICDVPKVILLETSTFNLLIVLEFTVKKCHRVRYN 301
L H L K PICD+P L E ++ L F ++ C ++ +N
Sbjct: 788 LTTHSLSYAKSKGKQPICDIP---LQEIASVEQLKDKSFKMQNCFKIVHN 834
>AE014134-2970|AAF53700.1| 530|Drosophila melanogaster CG10348-PA
protein.
Length = 530
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = +2
Query: 176 NDPPKKPPICDVPKV--ILLETSTFNL 250
N PP PP C +P V LLE T NL
Sbjct: 173 NAPPLTPPQCSIPAVHPTLLEAMTKNL 199
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,265,298
Number of Sequences: 53049
Number of extensions: 322958
Number of successful extensions: 765
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1396986582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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