Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmnc15d21
         (163 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   0.55 
L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier prot...    24   0.55 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    22   2.2  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    21   6.7  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    21   6.7  
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    20   8.9  
AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha su...    20   8.9  
AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha su...    20   8.9  
AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    20   8.9  

>L11618-1|AAB04104.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.55
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 125 AATLLTIANSLSRPFSKFLRSAVKSLWPCPS 33
           A  + T +  +S PF    R  +   WPC S
Sbjct: 219 AQVVTTASGIISYPFDTVRRRMMMQSWPCKS 249


>L11617-1|AAB04105.1|  301|Anopheles gambiae ADP/ATP carrier protein
           protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 0.55
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 125 AATLLTIANSLSRPFSKFLRSAVKSLWPCPS 33
           A  + T +  +S PF    R  +   WPC S
Sbjct: 219 AQVVTTASGIISYPFDTVRRRMMMQSWPCKS 249


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 58  TAERKNFENGRDKLFAIVNNVAAERRLVDQIHICL 162
           TA  +  E   + L A + ++ A      QIH+C+
Sbjct: 191 TARVRELEARLEALEAQLQSMRAREEFQQQIHVCM 225


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -2

Query: 99   QFITAIFEIFTLSSKIVVAVPVNW 28
            QF+  +   F   S+I+ +  +NW
Sbjct: 997  QFVAMLMHRFGTISQILASTELNW 1020


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 20.6 bits (41), Expect = 6.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 53  SLWPCPSIG 27
           SL+PCPS G
Sbjct: 246 SLYPCPSSG 254


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 129 FGSNVINYCEQFITAIFEIFTLSSKIVVAVPV 34
           FG++   Y E+  T   E F    +  V +PV
Sbjct: 270 FGTDSSTYVERLRTVPAEQFVPFQEATVTIPV 301


>AY724802-1|AAW50311.1|  134|Anopheles gambiae G protein alpha
           subunit AgOn protein.
          Length = 134

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 92  SRPFSKFLRSAVKSLW 45
           + PFS+ L  A+K LW
Sbjct: 104 TEPFSEDLLLAMKRLW 119


>AY724801-1|AAW50310.1|  134|Anopheles gambiae G protein alpha
           subunit AgOa protein.
          Length = 134

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 92  SRPFSKFLRSAVKSLW 45
           + PFS+ L  A+K LW
Sbjct: 104 TEPFSEDLLLAMKRLW 119


>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 20  RFSQLTGTAT 49
           R SQLTGTAT
Sbjct: 281 RRSQLTGTAT 290


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,625
Number of Sequences: 2352
Number of extensions: 2194
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 33
effective length of database: 486,363
effective search space used:  9727260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)