Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15d17
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein. 261 1e-69
BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a ... 261 1e-69
BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a ... 261 1e-69
BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein. 261 1e-69
BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a ... 261 1e-69
BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a ... 261 1e-69
BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a ... 261 1e-69
AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a ... 261 1e-69
AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a ... 261 1e-69
BC113699-1|AAI13700.1| 490|Homo sapiens ribosomal L1 domain con... 37 0.043
BC112228-1|AAI12229.1| 490|Homo sapiens ribosomal L1 domain con... 37 0.043
BC107782-1|AAI07783.1| 464|Homo sapiens RSL1D1 protein protein. 37 0.043
BC019069-1|AAH19069.2| 492|Homo sapiens RSL1D1 protein protein. 37 0.043
BC017899-1|AAH17899.1| 308|Homo sapiens Unknown (protein for IM... 37 0.043
AY598331-1|AAT06742.1| 490|Homo sapiens L12 protein. 37 0.043
AY154473-1|AAN46298.1| 490|Homo sapiens cellular senescence inh... 37 0.043
AJ007398-1|CAA07491.1| 517|Homo sapiens PBK1 protein protein. 37 0.043
AF083127-1|AAF98239.1| 322|Homo sapiens unknown protein. 37 0.043
BC016362-1|AAH16362.1| 440|Homo sapiens Unknown (protein for IM... 33 0.54
BC132868-1|AAI32869.1| 1115|Homo sapiens glutamate receptor, ion... 29 8.7
BC132866-1|AAI32867.1| 1115|Homo sapiens glutamate receptor, ion... 29 8.7
AJ416950-1|CAC95229.2| 1115|Homo sapiens N-methyl D-aspartate su... 29 8.7
AF416558-1|AAL40734.1| 1115|Homo sapiens N-methyl-D-aspartate re... 29 8.7
>U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein.
Length = 217
Score = 261 bits (640), Expect = 1e-69
Identities = 125/186 (67%), Positives = 143/186 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 24 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 83
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 84 HMDIEALKKLNKNKKLVKKLVKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 143
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 144 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 203
Query: 22 LHMKSS 5
L++KS+
Sbjct: 204 LYIKST 209
>BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 261 bits (640), Expect = 1e-69
Identities = 125/186 (67%), Positives = 143/186 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 24 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 83
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 84 HMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 143
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 144 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 203
Query: 22 LHMKSS 5
L++KS+
Sbjct: 204 LYIKST 209
>BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 261 bits (640), Expect = 1e-69
Identities = 125/186 (67%), Positives = 143/186 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 24 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 83
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 84 HMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 143
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 144 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 203
Query: 22 LHMKSS 5
L++KS+
Sbjct: 204 LYIKST 209
>BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein.
Length = 206
Score = 261 bits (640), Expect = 1e-69
Identities = 125/186 (67%), Positives = 143/186 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 13 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 72
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 73 HMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 132
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 133 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 192
Query: 22 LHMKSS 5
L++KS+
Sbjct: 193 LYIKST 198
>BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 261 bits (640), Expect = 1e-69
Identities = 125/186 (67%), Positives = 143/186 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 24 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 83
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 84 HMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 143
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 144 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 203
Query: 22 LHMKSS 5
L++KS+
Sbjct: 204 LYIKST 209
>BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 261 bits (640), Expect = 1e-69
Identities = 125/186 (67%), Positives = 143/186 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 24 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 83
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 84 HMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 143
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 144 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 203
Query: 22 LHMKSS 5
L++KS+
Sbjct: 204 LYIKST 209
>BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 261 bits (640), Expect = 1e-69
Identities = 125/186 (67%), Positives = 143/186 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 24 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 83
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 84 HMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 143
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 144 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 203
Query: 22 LHMKSS 5
L++KS+
Sbjct: 204 LYIKST 209
>AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 261 bits (640), Expect = 1e-69
Identities = 125/186 (67%), Positives = 143/186 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 24 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 83
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 84 HMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 143
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 144 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 203
Query: 22 LHMKSS 5
L++KS+
Sbjct: 204 LYIKST 209
>AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 261 bits (639), Expect = 1e-69
Identities = 125/185 (67%), Positives = 142/185 (76%)
Frame = -2
Query: 562 KKRNFLETVELQIGLKNYDPQKDKRFSGTVKLKYIPRPKMQVCVLGDQQHCDEAKTLNVP 383
K+R FLETVELQI LKNYDPQKDKRFSGTV+LK PRPK VCVLGDQQHCDEAK +++P
Sbjct: 24 KRRKFLETVELQISLKNYDPQKDKRFSGTVRLKSTPRPKFSVCVLGDQQHCDEAKAVDIP 83
Query: 382 CMXXXXXXXXXXXXXXXXXXXXXXXXXXASESLIKQIPRLLGPGLNKAGKFPGLLSHQES 203
M ASESLIKQIPR+LGPGLNKAGKFP LL+H E+
Sbjct: 84 HMDIEALKKLNKNKKLVKKLAKKYDAFLASESLIKQIPRILGPGLNKAGKFPSLLTHNEN 143
Query: 202 MTQKIDEVKGTIKFQMKKVLCLSVAVGHVDMTPDELAQNVHLSINFLVSLLKKHWQNVRS 23
M K+DEVK TIKFQMKKVLCL+VAVGHV MT DEL N+HL++NFLVSLLKK+WQNVR+
Sbjct: 144 MVAKVDEVKSTIKFQMKKVLCLAVAVGHVKMTDDELVYNIHLAVNFLVSLLKKNWQNVRA 203
Query: 22 LHMKS 8
L++KS
Sbjct: 204 LYIKS 208
>BC113699-1|AAI13700.1| 490|Homo sapiens ribosomal L1 domain
containing 1 protein.
Length = 490
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>BC112228-1|AAI12229.1| 490|Homo sapiens ribosomal L1 domain
containing 1 protein.
Length = 490
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>BC107782-1|AAI07783.1| 464|Homo sapiens RSL1D1 protein protein.
Length = 464
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>BC019069-1|AAH19069.2| 492|Homo sapiens RSL1D1 protein protein.
Length = 492
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 167 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 224
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 225 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 257
>BC017899-1|AAH17899.1| 308|Homo sapiens Unknown (protein for
IMAGE:4251450) protein.
Length = 308
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>AY598331-1|AAT06742.1| 490|Homo sapiens L12 protein.
Length = 490
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>AY154473-1|AAN46298.1| 490|Homo sapiens cellular senescence
inhibited gene protein protein.
Length = 490
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>AJ007398-1|CAA07491.1| 517|Homo sapiens PBK1 protein protein.
Length = 517
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>AF083127-1|AAF98239.1| 322|Homo sapiens unknown protein.
Length = 322
Score = 37.1 bits (82), Expect = 0.043
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 90 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 147
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ L L + W++V+ L +K+
Sbjct: 148 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 180
>BC016362-1|AAH16362.1| 440|Homo sapiens Unknown (protein for
IMAGE:4107571) protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.54
Identities = 23/93 (24%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Frame = -2
Query: 274 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 107
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 106 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 8
+ + +N+ +++ +S W++V+ L +K+
Sbjct: 223 IEHIIENI-VAVTKGLSEKLPEWESVKLLFVKT 254
>BC132868-1|AAI32869.1| 1115|Homo sapiens glutamate receptor,
ionotropic, N-methyl-D-aspartate 3A protein.
Length = 1115
Score = 29.5 bits (63), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 66 KLMERCTFWASSSGVMSTWPTATERHNTFFIWNLM-VPLTSSIFCVMDSWWERR 224
+ + TF S + T N FFIWNL P+ ++ + SW R+
Sbjct: 435 RFLANTTFRGLSGSIRVKGSTIVSSENNFFIWNLQHDPMGKPMWTRLGSWQGRK 488
>BC132866-1|AAI32867.1| 1115|Homo sapiens glutamate receptor,
ionotropic, N-methyl-D-aspartate 3A protein.
Length = 1115
Score = 29.5 bits (63), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 66 KLMERCTFWASSSGVMSTWPTATERHNTFFIWNLM-VPLTSSIFCVMDSWWERR 224
+ + TF S + T N FFIWNL P+ ++ + SW R+
Sbjct: 435 RFLANTTFRGLSGSIRVKGSTIVSSENNFFIWNLQHDPMGKPMWTRLGSWQGRK 488
>AJ416950-1|CAC95229.2| 1115|Homo sapiens N-methyl D-aspartate
subunit 3A protein.
Length = 1115
Score = 29.5 bits (63), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 66 KLMERCTFWASSSGVMSTWPTATERHNTFFIWNLM-VPLTSSIFCVMDSWWERR 224
+ + TF S + T N FFIWNL P+ ++ + SW R+
Sbjct: 435 RFLANTTFRGLSGSIRVKGSTIVSSENNFFIWNLQHDPMGKPMWTRLGSWQGRK 488
>AF416558-1|AAL40734.1| 1115|Homo sapiens N-methyl-D-aspartate
receptor 3A protein.
Length = 1115
Score = 29.5 bits (63), Expect = 8.7
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +3
Query: 66 KLMERCTFWASSSGVMSTWPTATERHNTFFIWNLM-VPLTSSIFCVMDSWWERR 224
+ + TF S + T N FFIWNL P+ ++ + SW R+
Sbjct: 435 RFLANTTFRGLSGSIRVKGSTIVSSENNFFIWNLQHDPMGKPMWTRLGSWQGRK 488
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,169,899
Number of Sequences: 237096
Number of extensions: 2039379
Number of successful extensions: 10712
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 10477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10703
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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