Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15d15
(578 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 128 6e-31
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 90 2e-19
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 83 2e-17
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 83 4e-17
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 77 2e-15
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 74 2e-14
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 68 9e-13
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 48 1e-06
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 26 4.6
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 25 6.1
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 128 bits (309), Expect = 6e-31
Identities = 56/138 (40%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
Frame = -2
Query: 574 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 395
+ +D R + GAGA++++L +L+ + PG+ Q+A++++ A E +PR +++N+G + T
Sbjct: 402 LVKDNRLIFGAGASDMQLCIRLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGLDPT 461
Query: 394 EVVNKIYKAH-KEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILK 218
+V++K+Y AH KE ++ G D++ EN+G DAKE GI D L K I+ A T+L
Sbjct: 462 DVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLN 521
Query: 217 VDQIIMAKRAGGPKPRAP 164
VDQ++M+K AGGPKP P
Sbjct: 522 VDQVVMSKPAGGPKPPGP 539
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 90.2 bits (214), Expect = 2e-19
Identities = 53/133 (39%), Positives = 80/133 (60%)
Frame = -2
Query: 553 VPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIY 374
V G GA E+EL++ L +++ T+ G +Q + FA +LE IPR L DN+G ++T ++NK+
Sbjct: 411 VAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLR 470
Query: 373 KAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 194
H +G+ AG D+DSE GV + EK + + +K I A AAT IL VD+ I K
Sbjct: 471 MQHAKGEMWAGVDMDSE--GVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETI--K 526
Query: 193 RAGGPKPRAPAGS 155
+P+AP G+
Sbjct: 527 NEPSQQPQAPQGA 539
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 83.4 bits (197), Expect = 2e-17
Identities = 44/127 (34%), Positives = 69/127 (54%)
Frame = -2
Query: 574 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 395
+ + + G G+ EIE AQ+LLE A L G E +R F+ ALE IP LA+N+G NA
Sbjct: 403 LVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAI 462
Query: 394 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 215
+VV ++ H G+K AG ++ V + E+ ++ L+ I+ A I+K+
Sbjct: 463 QVVTELRSRHANGEKTAGINV--RKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKI 520
Query: 214 DQIIMAK 194
D I +A+
Sbjct: 521 DDITLAR 527
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 82.6 bits (195), Expect = 4e-17
Identities = 45/120 (37%), Positives = 67/120 (55%)
Frame = -2
Query: 550 PGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYK 371
PG GATE+ ++ +L E A ++ G+ Q+ R A A+E IPR L N GAN + + ++
Sbjct: 407 PGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRA 466
Query: 370 AHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAKR 191
H EGQ + F ID E V D E G+ + +K IK A+ +A +L+VD I+ R
Sbjct: 467 KHAEGQHS--FGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSGVR 524
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 76.6 bits (180), Expect = 2e-15
Identities = 44/126 (34%), Positives = 71/126 (56%)
Frame = -2
Query: 574 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 395
+ RD R V G GA EI + + + A+ +PG++QY++ FA AL++IP ALA+NSG ++
Sbjct: 414 LIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSI 473
Query: 394 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 215
E + + KA + A ID G D +++ +ID + K + A +LKV
Sbjct: 474 EALTAV-KARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCRMVLKV 532
Query: 214 DQIIMA 197
+ II+A
Sbjct: 533 NDIIVA 538
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 73.7 bits (173), Expect = 2e-14
Identities = 44/132 (33%), Positives = 70/132 (53%)
Frame = -2
Query: 565 DGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVV 386
+ R G G E+ +A+ + E A PG + AV FA AL +P LADN+G +++E+V
Sbjct: 399 ESRVTLGGGCAEMLMAKAVEEAATHEPGKKAVAVSAFAKALSQLPTILADNAGFDSSELV 458
Query: 385 NKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQI 206
++ AH +G G D+D + D + KGI+++ LK + A +L+VD I
Sbjct: 459 AQLKAAHYDGNDTMGLDMD--EGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRVDTI 516
Query: 205 IMAKRAGGPKPR 170
+ A P+PR
Sbjct: 517 LKA----APRPR 524
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 68.1 bits (159), Expect = 9e-13
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 12/132 (9%)
Frame = -2
Query: 562 GRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVN 383
G+ VPG GA E L+ L FA +L EQ A+ +FA AL IPR LA N+ ++TE+
Sbjct: 411 GKVVPGGGAVETALSIYLENFATSLGSREQLAIAEFAQALLIIPRTLAVNAAKDSTELTA 470
Query: 382 KIYKAH------------KEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVG 239
K+ H K G KN G D+ N + D + G+++ + K +K AV
Sbjct: 471 KLRAYHAASQNAEVTDVKKRGYKNYGLDL--LNGVIRDNVKAGVLEPSMSKLKSLKSAVE 528
Query: 238 AATTILKVDQII 203
A IL++D I
Sbjct: 529 ACIAILRIDTSI 540
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 48.0 bits (109), Expect = 1e-06
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = -2
Query: 565 DGRFVPGAGATEIELAQQLLE--FADTLPGLEQYAVRKFAVALESIPRALADNSGANATE 392
D + GAGA E+ A L A + G + V +A AL IP+ LA NS + +
Sbjct: 403 DNCLIVGAGAFEVACAAHLRNKFAAKEVKGKAKMGVYAYADALLIIPKTLAANSSYDTQD 462
Query: 391 VVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVD 212
+ + + EG K G D+ + D + +GI D+Y + + A A+ ++ VD
Sbjct: 463 AIVALQEEASEGYK-VGLDL--KTGMPFDPEVEGIYDNYRVIRHMLHSATVIASNLISVD 519
Query: 211 QIIMAKRA 188
QI+ A R+
Sbjct: 520 QILRAGRS 527
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 4.6
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 255 IPQNFKRY--ESIMPFSFASQTPLFSESISKPAFFCPSL 365
+P +R+ + +P ++ + TP FS S K AF PSL
Sbjct: 434 LPPRLRRFFVDDYVPSAYITLTPTFSFSDIKHAFTKPSL 472
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.4 bits (53), Expect = 6.1
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +3
Query: 102 IKSMLYQMMQTNI*DSSSLPAGALGFGPPALFAIMI*STLRMVVAAPTAYFIPQNFKRYE 281
IKS + + N+ D S A AI + S +R + AP++ +P YE
Sbjct: 54 IKSRIEMDLFINLADQSKAEEFAFKNKLSKESAIQLSSCIRKTLLAPSSTRVPSKNSSYE 113
Query: 282 SIMPFSFASQTPLFSESIS 338
++ + S +F+E+ S
Sbjct: 114 TLTYSAKDSSDDVFTETNS 132
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,187,147
Number of Sequences: 5004
Number of extensions: 42797
Number of successful extensions: 108
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 104
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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