Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15d15
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 144 5e-35
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 82 2e-16
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 82 2e-16
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 81 6e-16
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 81 7e-16
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 81 7e-16
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 79 3e-15
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 79 3e-15
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 79 3e-15
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 75 3e-14
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 70 1e-12
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 66 2e-11
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 53 2e-07
Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical pr... 28 5.5
U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical p... 28 5.5
U40160-2|AAA81156.1| 547|Caenorhabditis elegans Hypothetical pr... 27 7.3
AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical... 27 7.3
AC006638-8|AAK85487.2| 644|Caenorhabditis elegans Hypothetical ... 27 7.3
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 27 9.6
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 27 9.6
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 27 9.6
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 27 9.6
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 27 9.6
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF067943-4|AAC17661.1| 359|Caenorhabditis elegans Hypothetical ... 27 9.6
AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical ... 27 9.6
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 144 bits (348), Expect = 5e-35
Identities = 73/144 (50%), Positives = 96/144 (66%), Gaps = 1/144 (0%)
Frame = -2
Query: 574 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 395
+ +DG+ + GAGA EIELA+++ F PGLEQYA++KFA ALE++P+A+A+N+G T
Sbjct: 435 LTKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAENAGMPTT 494
Query: 394 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 215
E + K+Y H G+KNAG DI DA I D Y K IK A AA+TILKV
Sbjct: 495 ETLTKLYAEHVAGKKNAGIDIWKRE--TMDAVVNNIFDLYAGKRLAIKLATDAASTILKV 552
Query: 214 DQIIMAKRA-GGPKPRAPAGSDDE 146
DQIIM+K+A GGPKPR P D++
Sbjct: 553 DQIIMSKQATGGPKPRGPKAQDED 576
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 82.2 bits (194), Expect = 2e-16
Identities = 48/123 (39%), Positives = 69/123 (56%)
Frame = -2
Query: 574 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 395
+ RD R V G G+ E+ A Q+ + AD + G+EQYA R FA ALESIP ALA+NSG
Sbjct: 411 LVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPI 470
Query: 394 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 215
+ ++ + KA + + ID+ G D KE+ +I++ L K I A ILK+
Sbjct: 471 DALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKI 529
Query: 214 DQI 206
D +
Sbjct: 530 DDV 532
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 82.2 bits (194), Expect = 2e-16
Identities = 48/123 (39%), Positives = 69/123 (56%)
Frame = -2
Query: 574 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 395
+ RD R V G G+ E+ A Q+ + AD + G+EQYA R FA ALESIP ALA+NSG
Sbjct: 411 LVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPI 470
Query: 394 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 215
+ ++ + KA + + ID+ G D KE+ +I++ L K I A ILK+
Sbjct: 471 DALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKI 529
Query: 214 DQI 206
D +
Sbjct: 530 DDV 532
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 82.2 bits (194), Expect = 2e-16
Identities = 48/123 (39%), Positives = 69/123 (56%)
Frame = -2
Query: 574 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 395
+ RD R V G G+ E+ A Q+ + AD + G+EQYA R FA ALESIP ALA+NSG
Sbjct: 205 LVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPI 264
Query: 394 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 215
+ ++ + KA + + ID+ G D KE+ +I++ L K I A ILK+
Sbjct: 265 DALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKI 323
Query: 214 DQI 206
D +
Sbjct: 324 DDV 326
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 82.2 bits (194), Expect = 2e-16
Identities = 48/123 (39%), Positives = 69/123 (56%)
Frame = -2
Query: 574 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 395
+ RD R V G G+ E+ A Q+ + AD + G+EQYA R FA ALESIP ALA+NSG
Sbjct: 411 LVRDSRIVYGGGSAELAAAIQVAKEADRIDGIEQYAFRAFADALESIPMALAENSGLAPI 470
Query: 394 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 215
+ ++ + KA + + ID+ G D KE+ +I++ L K I A ILK+
Sbjct: 471 DALSDL-KAKQIETGKSSLGIDAVFAGTNDMKEQKVIETLLSKREQISLATQVVRMILKI 529
Query: 214 DQI 206
D +
Sbjct: 530 DDV 532
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 81.0 bits (191), Expect = 6e-16
Identities = 44/124 (35%), Positives = 67/124 (54%)
Frame = -2
Query: 568 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEV 389
++ + V GAGA+EI ++ + A + G E AV F AL +P + DN+G ++ E+
Sbjct: 396 KESKTVAGAGASEILMSSAIAVEAQKVAGKESLAVEAFGRALAQLPTIICDNAGLDSAEL 455
Query: 388 VNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQ 209
V ++ H G+ N G DI E V D + G+I+SY +K + A A IL+VD
Sbjct: 456 VTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDD 513
Query: 208 IIMA 197
II A
Sbjct: 514 IIKA 517
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 80.6 bits (190), Expect = 7e-16
Identities = 44/124 (35%), Positives = 67/124 (54%)
Frame = -2
Query: 568 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEV 389
++ + V GAGA+EI ++ + A + G E AV F AL +P + DN+G ++ E+
Sbjct: 396 KESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAEL 455
Query: 388 VNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQ 209
V ++ H G+ N G DI E V D + G+I+SY +K + A A IL+VD
Sbjct: 456 VTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDD 513
Query: 208 IIMA 197
II A
Sbjct: 514 IIKA 517
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 80.6 bits (190), Expect = 7e-16
Identities = 44/124 (35%), Positives = 67/124 (54%)
Frame = -2
Query: 568 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEV 389
++ + V GAGA+EI ++ + A + G E AV F AL +P + DN+G ++ E+
Sbjct: 396 KESKTVAGAGASEILMSSAIAVEAQKVAGKEALAVEAFGRALAQLPTIICDNAGLDSAEL 455
Query: 388 VNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQ 209
V ++ H G+ N G DI E V D + G+I+SY +K + A A IL+VD
Sbjct: 456 VTRLRAEHANGRHNMGIDI--EKGEVADVTKLGVIESYNVKLCMVSSAAEATEQILRVDD 513
Query: 208 IIMA 197
II A
Sbjct: 514 IIKA 517
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 78.6 bits (185), Expect = 3e-15
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 8/145 (5%)
Frame = -2
Query: 559 RFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNK 380
+ V G GA E L+ L +A TL EQ AV +FA AL IP+ LA N+ ++T++V K
Sbjct: 410 KLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTK 469
Query: 379 IYKAHKEGQ--------KNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTI 224
+ H + Q K AG D+ E + D KE GI++ L K +K+A AA TI
Sbjct: 470 LRAYHSKAQLIPQLQHLKWAGLDL--EEGTIRDNKEAGILEPALSKVKSLKFATEAAITI 527
Query: 223 LKVDQIIMAKRAGGPKPRAPAGSDD 149
L++D +I + + P G DD
Sbjct: 528 LRIDDLIKLDK------QEPLGGDD 546
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 78.6 bits (185), Expect = 3e-15
Identities = 44/121 (36%), Positives = 64/121 (52%)
Frame = -2
Query: 553 VPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIY 374
+PG GA E+E+A +L A T G QY R FA ALE IP LA+N+G + V ++
Sbjct: 422 LPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELR 481
Query: 373 KAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 194
H G N+ + ++ V D E+ ++ L+ IK A +ILK+D I+MA
Sbjct: 482 NNHANG--NSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMAV 539
Query: 193 R 191
R
Sbjct: 540 R 540
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 78.6 bits (185), Expect = 3e-15
Identities = 44/121 (36%), Positives = 64/121 (52%)
Frame = -2
Query: 553 VPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIY 374
+PG GA E+E+A +L A T G QY R FA ALE IP LA+N+G + V ++
Sbjct: 422 LPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELR 481
Query: 373 KAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 194
H G N+ + ++ V D E+ ++ L+ IK A +ILK+D I+MA
Sbjct: 482 NNHANG--NSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIVMAV 539
Query: 193 R 191
R
Sbjct: 540 R 540
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 75.4 bits (177), Expect = 3e-14
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
Frame = -2
Query: 559 RFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNK 380
+ V G GA E L+ L +A TL EQ AV +FA AL IP+ LA N+ ++T++V
Sbjct: 410 KLVAGGGAVETSLSLFLETYAQTLSSREQLAVAEFASALLIIPKVLASNAARDSTDLVTF 469
Query: 379 IYKAHKEGQ--------KNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTI 224
+ H + Q K AG D+ E + D KE GI++ L K +K+A AA TI
Sbjct: 470 LRAYHSKAQLIPQLQHLKWAGLDL--EEGTIRDNKEAGILEPALSKVKSLKFATEAAITI 527
Query: 223 LKVDQIIMAKRAGGPKPRAPAGSDD 149
L++D +I + + P G DD
Sbjct: 528 LRIDDLIKLDK------QEPLGGDD 546
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 70.1 bits (164), Expect = 1e-12
Identities = 45/137 (32%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Frame = -2
Query: 568 RDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEV 389
++ V G GA E+EL++ + E + + G +Q + A E IPR L N+G +A +V
Sbjct: 399 KNDSIVAGGGAIEMELSRLIREHSKGIEGKDQAFWMAYGQAFEIIPRQLCQNAGLDALDV 458
Query: 388 VNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQ 209
+NK+ H +G+K AG DI E V D + + ++K I A AA +L +DQ
Sbjct: 459 LNKLRHRHAQGEKWAGIDIHRE--AVGDNLVACVWEPSIVKRNAITAATEAACLVLSIDQ 516
Query: 208 IIMAKR--AGGPKPRAP 164
+ R +GG P P
Sbjct: 517 TVKNVRTPSGGAMPGLP 533
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Frame = -2
Query: 559 RFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNK 380
+ VPG GA E+ L++++ + + G++++ + +ALE IPR L N G + + +
Sbjct: 408 KLVPGGGALEMALSREIEQQGAKMDGVKKWPYKAIGLALEVIPRTLIQNCGGSTIRKMTE 467
Query: 379 IYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIM 200
+ H + +N F +D + + D + I D ++ +K A+ + +L++D I+
Sbjct: 468 LRAIHAQNAENWTFGVDGTSGDLVDMNKLEIWDPLAVRIQVLKTAIETSVMLLRIDDIVS 527
Query: 199 A--KRAGGPK 176
K GG K
Sbjct: 528 GTKKAVGGEK 537
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/132 (28%), Positives = 59/132 (44%)
Frame = -2
Query: 565 DGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVV 386
D +PGA A EI L + + L G + FA AL IP+ LA N G +A E +
Sbjct: 408 DKAVLPGAAAFEIAAYVMLKKDVENLKGRAKLGAEAFAQALLVIPKTLAVNGGYDAQETL 467
Query: 385 NKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQI 206
K+ + + +D E G + +GI D+ +K I A A +L VD++
Sbjct: 468 VKLIEEKTAAGPDIAVGLDLETGGA--VEPQGIWDNVTVKKNSISSATVLACNLLLVDEV 525
Query: 205 IMAKRAGGPKPR 170
+ A +P+
Sbjct: 526 MRAGMTNLKQPQ 537
>Z81058-6|CAB62801.2| 252|Caenorhabditis elegans Hypothetical
protein F11E6.6 protein.
Length = 252
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 228 VVAAPTAYFIPQNFKRYESIMPFSFASQTPLFSESI 335
+ A T YF K+Y I+PF + LF E +
Sbjct: 18 ISATATKYFFVSLLKKYPHILPFLASRDASLFGECV 53
>U14635-13|AAC46654.2| 322|Caenorhabditis elegans Hypothetical
protein C27H5.6 protein.
Length = 322
Score = 27.9 bits (59), Expect = 5.5
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -3
Query: 492 LCPV*NS--ML*GSLQ--WLLRAYLVLWQITQVPMPLKL*TKFTRHTRRDKKMLVLIL 331
+C V NS ++ G++ W+ +Y++ + +T +KF HT + K+M +LIL
Sbjct: 170 MCAVMNSTGIVYGTIHYCWIACSYMIAFAVTLNLFLRSHGSKFLNHTEKRKQMAILIL 227
>U40160-2|AAA81156.1| 547|Caenorhabditis elegans Hypothetical
protein C56E10.1 protein.
Length = 547
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 218 LKNGCCCSNSILYSPEFQKI*VNYA 292
L G CC ++I P F+++ VNYA
Sbjct: 85 LPKGTCCFSTIRTFPAFEQLIVNYA 109
>AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical
protein Y47G6A.4 protein.
Length = 627
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 421 PKHEVCSQEPLQTSLQHTVLNR 486
P HE+C Q+ TSL T+L R
Sbjct: 432 PVHEICIQDGSDTSLPQTILAR 453
>AC006638-8|AAK85487.2| 644|Caenorhabditis elegans Hypothetical
protein F41G4.7 protein.
Length = 644
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -3
Query: 252 SMLLEQ-QQPFLRLIKSLWQREQAGQNQERQLEVMMSLKY 136
+++LE +PF R+I +LW + + +Q +Q+ +++ Y
Sbjct: 220 NLILESGPRPFKRIIINLWAQFKESDSQPKQITAFVTIHY 259
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 27.1 bits (57), Expect = 9.6
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 448 ALESIP-RALADNSGANATEVVNKIYK--AHKEGQKNAGFDIDSENNGVCDAKEKGIIDS 278
A E IP + AD E++ + K +HKE QK + S++NG +AK++ DS
Sbjct: 168 AEERIPFQQRADEEKVKYLELMEEYKKTDSHKEFQKKRAKFLSSQSNGSKNAKKRRQADS 227
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 27.1 bits (57), Expect = 9.6
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -2
Query: 577 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN----- 413
G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 139 GMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNNFRQVV 198
Query: 412 -SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 320
S A + + + K+ A G N+G D D E+
Sbjct: 199 SSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 231
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 27.1 bits (57), Expect = 9.6
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -2
Query: 577 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN----- 413
G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 2 GMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNNFRQVV 61
Query: 412 -SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 320
S A + + + K+ A G N+G D D E+
Sbjct: 62 SSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 94
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 27.1 bits (57), Expect = 9.6
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -2
Query: 577 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN----- 413
G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 139 GMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNNFRQVV 198
Query: 412 -SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 320
S A + + + K+ A G N+G D D E+
Sbjct: 199 SSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 231
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 27.1 bits (57), Expect = 9.6
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -2
Query: 577 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN----- 413
G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 105 GMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNNFRQVV 164
Query: 412 -SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 320
S A + + + K+ A G N+G D D E+
Sbjct: 165 SSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 197
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 27.1 bits (57), Expect = 9.6
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Frame = -2
Query: 577 GIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADN----- 413
G+ D R PGA ++ + A +PG A + + +IP A+++N
Sbjct: 165 GMEDDQRMRPGATRPMTIGGEKTMSMARPIPGASSRAGSGHSGSPITIPNAMSNNFRQVV 224
Query: 412 -SGANATEV-VNKIYKAHKEGQKNAGFDIDSEN 320
S A + + + K+ A G N+G D D E+
Sbjct: 225 SSSAPTSSIDIEKMIGAVSNGGGNSGGDNDPED 257
>AF067943-4|AAC17661.1| 359|Caenorhabditis elegans Hypothetical
protein F59B1.6 protein.
Length = 359
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +2
Query: 191 SLCHNDLINLKN-GCCCSNSILYSPEFQKI*VNYAFFFCITNTIVF 325
SL HN++++ C+N++ S + K ++Y+ F TN I+F
Sbjct: 311 SLRHNNILSKHTIQAGCNNNVSCSTQTAKCGIDYSSFGSSTNLIIF 356
>AF016425-1|AAD34668.1| 458|Caenorhabditis elegans Hypothetical
protein F59A7.1 protein.
Length = 458
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -2
Query: 355 QKNAGFDIDSENNGVCDAKEKGIIDSYL--LKFWGIKYAVGAATTILKVDQI 206
Q A +++ S+ NGVC+ E G D + + + Y + A +L I
Sbjct: 312 QSKAMYNLTSKTNGVCNIGEDGDFDELMDYIPIYDAPYPIYCANPVLSGQNI 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,259,123
Number of Sequences: 27780
Number of extensions: 256215
Number of successful extensions: 754
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -