Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmnc15d13
(642 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF051933-1|AAC73052.1| 1097|Drosophila melanogaster cyclin T pro... 33 0.33
AE014296-2931|AAF49325.1| 1097|Drosophila melanogaster CG6292-PB... 33 0.33
AY071233-1|AAL48855.1| 406|Drosophila melanogaster RE26969p pro... 30 3.1
AE014298-1908|AAF48271.1| 406|Drosophila melanogaster CG1998-PA... 30 3.1
AF080399-1|AAC32190.1| 1461|Drosophila melanogaster mitotic chec... 29 5.4
BT003638-1|AAO39642.1| 511|Drosophila melanogaster AT17761p pro... 28 9.4
AY069586-1|AAL39731.1| 1916|Drosophila melanogaster LD32687p pro... 28 9.4
AE014296-1814|AAN11912.1| 511|Drosophila melanogaster CG12362-P... 28 9.4
AE014296-1813|AAF50159.1| 511|Drosophila melanogaster CG12362-P... 28 9.4
AE014134-2071|AAF53101.1| 1916|Drosophila melanogaster CG6509-PB... 28 9.4
AE014134-2070|AAF53102.1| 1916|Drosophila melanogaster CG6509-PA... 28 9.4
>AF051933-1|AAC73052.1| 1097|Drosophila melanogaster cyclin T
protein.
Length = 1097
Score = 33.1 bits (72), Expect = 0.33
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 82 IHILGFD*KM-HDFTHTLGVV-IVKMCQSLDQTSVFTFGTRNHVCNVTV*YKPLPVHTAA 255
+ LGFD + H TH + +VK C+ L QTS F H+ ++ + Y+P V
Sbjct: 168 LQTLGFDVAIDHPHTHVVRTCQLVKACKDLAQTSYFLASNSLHLTSMCLQYRPTVVACFC 227
Query: 256 RYI 264
Y+
Sbjct: 228 IYL 230
>AE014296-2931|AAF49325.1| 1097|Drosophila melanogaster CG6292-PB,
isoform B protein.
Length = 1097
Score = 33.1 bits (72), Expect = 0.33
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 82 IHILGFD*KM-HDFTHTLGVV-IVKMCQSLDQTSVFTFGTRNHVCNVTV*YKPLPVHTAA 255
+ LGFD + H TH + +VK C+ L QTS F H+ ++ + Y+P V
Sbjct: 168 LQTLGFDVAIDHPHTHVVRTCQLVKACKDLAQTSYFLASNSLHLTSMCLQYRPTVVACFC 227
Query: 256 RYI 264
Y+
Sbjct: 228 IYL 230
>AY071233-1|AAL48855.1| 406|Drosophila melanogaster RE26969p
protein.
Length = 406
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 5 GLRPLQLPANGQSLSTVFIFWQFGGLYTSWDLIKR 109
G P+ L G ++ T+ ++W G LYT DL R
Sbjct: 147 GDEPMVLWVFGTTIFTMLVYWTVGTLYTFMDLTNR 181
>AE014298-1908|AAF48271.1| 406|Drosophila melanogaster CG1998-PA
protein.
Length = 406
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 5 GLRPLQLPANGQSLSTVFIFWQFGGLYTSWDLIKR 109
G P+ L G ++ T+ ++W G LYT DL R
Sbjct: 147 GDEPMVLWVFGTTIFTMLVYWTVGTLYTFMDLTNR 181
>AF080399-1|AAC32190.1| 1461|Drosophila melanogaster mitotic
checkpoint control proteinkinase BUB1 protein.
Length = 1461
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -1
Query: 150 FYNYDSKCVGEVMHLLIKSQDVYKPPNCQKMKTVDKL 40
FY+ D C ++ ++ IKSQ V P QK V +
Sbjct: 616 FYDGDETCSTQMFNMFIKSQAVSTPKGTQKQAPVTSI 652
>BT003638-1|AAO39642.1| 511|Drosophila melanogaster AT17761p
protein.
Length = 511
Score = 28.3 bits (60), Expect = 9.4
Identities = 8/31 (25%), Positives = 22/31 (70%)
Frame = -1
Query: 375 ICMKECVEGKNNVVDMLNSKINMPPCIQKIL 283
+ + + V+ + N++D +N+ +N+PP + +I+
Sbjct: 57 LSVDQIVQHQRNIIDEVNNVLNLPPQVTRII 87
>AY069586-1|AAL39731.1| 1916|Drosophila melanogaster LD32687p protein.
Length = 1916
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 277 IAQYFLYARRHIDLAVQHV 333
I++Y +YA+RH+ AV+HV
Sbjct: 1003 ISEYGMYAKRHVPQAVRHV 1021
>AE014296-1814|AAN11912.1| 511|Drosophila melanogaster CG12362-PB,
isoform B protein.
Length = 511
Score = 28.3 bits (60), Expect = 9.4
Identities = 8/31 (25%), Positives = 22/31 (70%)
Frame = -1
Query: 375 ICMKECVEGKNNVVDMLNSKINMPPCIQKIL 283
+ + + V+ + N++D +N+ +N+PP + +I+
Sbjct: 57 LSVDQIVQHQRNIIDEVNNVLNLPPQVTRII 87
>AE014296-1813|AAF50159.1| 511|Drosophila melanogaster CG12362-PA,
isoform A protein.
Length = 511
Score = 28.3 bits (60), Expect = 9.4
Identities = 8/31 (25%), Positives = 22/31 (70%)
Frame = -1
Query: 375 ICMKECVEGKNNVVDMLNSKINMPPCIQKIL 283
+ + + V+ + N++D +N+ +N+PP + +I+
Sbjct: 57 LSVDQIVQHQRNIIDEVNNVLNLPPQVTRII 87
>AE014134-2071|AAF53101.1| 1916|Drosophila melanogaster CG6509-PB,
isoform B protein.
Length = 1916
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 277 IAQYFLYARRHIDLAVQHV 333
I++Y +YA+RH+ AV+HV
Sbjct: 1003 ISEYGMYAKRHVPQAVRHV 1021
>AE014134-2070|AAF53102.1| 1916|Drosophila melanogaster CG6509-PA,
isoform A protein.
Length = 1916
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +1
Query: 277 IAQYFLYARRHIDLAVQHV 333
I++Y +YA+RH+ AV+HV
Sbjct: 1003 ISEYGMYAKRHVPQAVRHV 1021
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,749,059
Number of Sequences: 53049
Number of extensions: 659282
Number of successful extensions: 1579
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1579
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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